RNA–Protein interactions for RNA: ENST00000506714.5

HERC6-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 2

Gene HERC6, Length 2,293 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-206ENST00000506714 COL18A1P39060 1754 aa17.6■□□□□ 0.41
HERC6-206ENST00000506714 KIF20AO95235 890 aa17.6■□□□□ 0.41
HERC6-206ENST00000506714 CCDC129Q6ZRS4 1044 aa17.6■□□□□ 0.41
HERC6-206ENST00000506714 SOS2Q07890 1332 aaPredicted RBP17.6■□□□□ 0.41
HERC6-206ENST00000506714 SNW1Q13573 536 aaKnown RBP17.59■□□□□ 0.41
HERC6-206ENST00000506714 C11orf57Q6ZUT1 292 aaPredicted RBP17.59■□□□□ 0.41
HERC6-206ENST00000506714 ERBB3P21860 1342 aa17.59■□□□□ 0.41
HERC6-206ENST00000506714 ABCC6O95255 1503 aa17.59■□□□□ 0.41
HERC6-206ENST00000506714 ARFGEF2Q9Y6D5 1785 aa17.59■□□□□ 0.41
HERC6-206ENST00000506714 CEBPZQ03701 1054 aaKnown RBP17.59■□□□□ 0.41
HERC6-206ENST00000506714 SEC62Q99442 399 aaKnown RBP17.59■□□□□ 0.41
HERC6-206ENST00000506714 DBNDD2Q9BQY9 259 aa17.59■□□□□ 0.41
HERC6-206ENST00000506714 KCND1Q9NSA2 647 aa17.59■□□□□ 0.41
HERC6-206ENST00000506714 PTPDC1A2A3K4 754 aa17.58■□□□□ 0.4
HERC6-206ENST00000506714 SPDYE4A6NLX3 237 aa17.58■□□□□ 0.4
HERC6-206ENST00000506714 EXOSC10Q01780 885 aaKnown RBP17.58■□□□□ 0.4
HERC6-206ENST00000506714 CEP57L1Q8IYX8 460 aa17.58■□□□□ 0.4
HERC6-206ENST00000506714 ENGASEQ8NFI3 743 aa17.58■□□□□ 0.4
HERC6-206ENST00000506714 ZNF274Q96GC6 653 aaPredicted RBP17.58■□□□□ 0.4
HERC6-206ENST00000506714 ABCA3Q99758 1704 aa17.58■□□□□ 0.4
HERC6-206ENST00000506714 GSDMDP57764 484 aa17.58■□□□□ 0.4
HERC6-206ENST00000506714 PTPN14Q15678 1187 aa17.58■□□□□ 0.4
HERC6-206ENST00000506714 STOX1Q6ZVD7 989 aa17.58■□□□□ 0.4
HERC6-206ENST00000506714 KIF2AO00139 706 aaPredicted RBP17.57■□□□□ 0.4
HERC6-206ENST00000506714 CTDNEP1O95476 244 aa17.57■□□□□ 0.4
HERC6-206ENST00000506714 SKILP12757 684 aa17.57■□□□□ 0.4
HERC6-206ENST00000506714 SLC39A6Q13433 755 aa17.57■□□□□ 0.4
HERC6-206ENST00000506714 DHX40Q8IX18 779 aaKnown RBP17.57■□□□□ 0.4
HERC6-206ENST00000506714 USP28Q96RU2 1077 aa17.57■□□□□ 0.4
HERC6-206ENST00000506714 LRRC2Q9BYS8 371 aa17.57■□□□□ 0.4
HERC6-206ENST00000506714 CTNNA3Q9UI47 895 aa17.57■□□□□ 0.4
HERC6-206ENST00000506714 SALL1Q9NSC2 1324 aa17.56■□□□□ 0.4
HERC6-206ENST00000506714 SNRPA1P09661 255 aaKnown RBP17.56■□□□□ 0.4
HERC6-206ENST00000506714 DHX8Q14562 1220 aaKnown RBP17.56■□□□□ 0.4
HERC6-206ENST00000506714 NYAP1Q6ZVC0 841 aa17.56■□□□□ 0.4
HERC6-206ENST00000506714 DDX46Q7L014 1031 aaKnown RBP17.56■□□□□ 0.4
HERC6-206ENST00000506714 UBE3BQ7Z3V4 1068 aa17.56■□□□□ 0.4
HERC6-206ENST00000506714 RAPGEF4Q8WZA2 1011 aa17.56■□□□□ 0.4
HERC6-206ENST00000506714 GOLPH3LQ9H4A5 285 aa17.56■□□□□ 0.4
HERC6-206ENST00000506714 SPEF2Q9C093 1822 aa17.56■□□□□ 0.4
HERC6-206ENST00000506714 APOBRQ0VD83 1088 aa17.56■□□□□ 0.4
HERC6-206ENST00000506714 CHRNA2Q15822 529 aa17.56■□□□□ 0.4
HERC6-206ENST00000506714 GPR108Q9NPR9 543 aa17.56■□□□□ 0.4
HERC6-206ENST00000506714 IMPACTQ9P2X3 320 aa17.56■□□□□ 0.4
HERC6-206ENST00000506714 CPDO75976 1380 aa17.55■□□□□ 0.4
HERC6-206ENST00000506714 CCDC69A6NI79 296 aa17.55■□□□□ 0.4
HERC6-206ENST00000506714 ME1P48163 572 aa17.55■□□□□ 0.4
HERC6-206ENST00000506714 LRP10Q7Z4F1 713 aa17.55■□□□□ 0.4
HERC6-206ENST00000506714 FBXL16Q8N461 479 aa17.55■□□□□ 0.4
HERC6-206ENST00000506714 FSIP1Q8NA03 581 aa17.55■□□□□ 0.4
HERC6-206ENST00000506714 KDM6AO15550 1401 aaPredicted RBP17.55■□□□□ 0.4
HERC6-206ENST00000506714 NFATC2IPQ8NCF5 419 aa17.55■□□□□ 0.4
HERC6-206ENST00000506714 MRPS27Q92552 414 aaKnown RBP17.55■□□□□ 0.4
HERC6-206ENST00000506714 PAG1Q9NWQ8 432 aa17.55■□□□□ 0.4
HERC6-206ENST00000506714 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.55■□□□□ 0.4
HERC6-206ENST00000506714 NDUFB9Q9Y6M9 179 aa17.55■□□□□ 0.4
HERC6-206ENST00000506714 ROBO1Q9Y6N7 1651 aa17.54■□□□□ 0.4
HERC6-206ENST00000506714 A0A087WZG4 1122 aa17.54■□□□□ 0.4
HERC6-206ENST00000506714 A0A1W2PQ27 194 aa17.54■□□□□ 0.4
HERC6-206ENST00000506714 A0A1W2PQ64 194 aa17.54■□□□□ 0.4
HERC6-206ENST00000506714 A0A1W2PQD8 194 aa17.54■□□□□ 0.4
HERC6-206ENST00000506714 CSB-PGBD3P0DP91 1061 aa17.54■□□□□ 0.4
HERC6-206ENST00000506714 ZMYM1Q5SVZ6 1142 aa17.54■□□□□ 0.4
HERC6-206ENST00000506714 ADALQ6DHV7 355 aa17.54■□□□□ 0.4
HERC6-206ENST00000506714 ZNF592Q92610 1267 aa17.54■□□□□ 0.4
HERC6-206ENST00000506714 ZNF496Q96IT1 587 aaPredicted RBP17.54■□□□□ 0.4
HERC6-206ENST00000506714 E7EWF7 191 aa17.54■□□□□ 0.4
HERC6-206ENST00000506714 CCZ1BP86790 482 aa17.54■□□□□ 0.4
HERC6-206ENST00000506714 CCZ1P86791 482 aaPredicted RBP17.54■□□□□ 0.4
HERC6-206ENST00000506714 TTC5Q8N0Z6 440 aa17.54■□□□□ 0.4
HERC6-206ENST00000506714 NLRP2Q9NX02 1062 aa17.54■□□□□ 0.4
HERC6-206ENST00000506714 RTEL1Q9NZ71 1219 aa17.54■□□□□ 0.4
HERC6-206ENST00000506714 DDX41Q9UJV9 622 aaKnown RBP17.54■□□□□ 0.4
HERC6-206ENST00000506714 ZHX1Q9UKY1 873 aaPredicted RBP17.54■□□□□ 0.4
HERC6-206ENST00000506714 PHKG2P15735 406 aa17.53■□□□□ 0.4
HERC6-206ENST00000506714 PDIA3P30101 505 aaKnown RBP17.53■□□□□ 0.4
HERC6-206ENST00000506714 CCT2P78371 535 aaKnown RBP17.53■□□□□ 0.4
HERC6-206ENST00000506714 FMR1NBQ8N0W7 255 aaPredicted RBP17.53■□□□□ 0.4
HERC6-206ENST00000506714 KIF18AQ8NI77 898 aa17.53■□□□□ 0.4
HERC6-206ENST00000506714 BPIFA3Q9BQP9 254 aa17.53■□□□□ 0.4
HERC6-206ENST00000506714 OSBPL5Q9H0X9 879 aaPredicted RBP17.53■□□□□ 0.4
HERC6-206ENST00000506714 USP16Q9Y5T5 823 aa17.53■□□□□ 0.4
HERC6-206ENST00000506714 LTBP4Q8N2S1 1624 aa17.53■□□□□ 0.4
HERC6-206ENST00000506714 CHGBP05060 677 aa17.52■□□□□ 0.4
HERC6-206ENST00000506714 TATP17735 454 aaPredicted RBP17.52■□□□□ 0.4
HERC6-206ENST00000506714 CASP7P55210 303 aa17.52■□□□□ 0.4
HERC6-206ENST00000506714 ZRSR1Q15695 479 aaKnown RBP17.52■□□□□ 0.4
HERC6-206ENST00000506714 FILIP1Q7Z7B0 1213 aa17.52■□□□□ 0.4
HERC6-206ENST00000506714 CCAR2Q8N163 923 aaKnown RBP17.52■□□□□ 0.4
HERC6-206ENST00000506714 FMNL2Q96PY5 1086 aa17.52■□□□□ 0.4
HERC6-206ENST00000506714 SDF4Q9BRK5 362 aa17.52■□□□□ 0.4
HERC6-206ENST00000506714 FTOQ9C0B1 505 aaKnown RBP eCLIP17.52■□□□□ 0.4
HERC6-206ENST00000506714 CARMIL3Q8ND23 1372 aa17.52■□□□□ 0.4
HERC6-206ENST00000506714 PLEKHG2Q9H7P9 1386 aa17.52■□□□□ 0.4
HERC6-206ENST00000506714 GOLIM4O00461 696 aa17.52■□□□□ 0.4
HERC6-206ENST00000506714 HSPD1P10809 573 aaKnown RBP17.52■□□□□ 0.4
HERC6-206ENST00000506714 EVCP57679 992 aa17.52■□□□□ 0.4
HERC6-206ENST00000506714 GABPB1Q06547 395 aaPredicted RBP17.52■□□□□ 0.4
HERC6-206ENST00000506714 IFNL2Q8IZJ0 200 aa17.52■□□□□ 0.4
HERC6-206ENST00000506714 AOPEPQ8N6M6 819 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms