RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 FCGRTP55899 365 aa4.88□□□□□ -1.63
TRAPPC11-205ENST00000506426 TNP2Q05952 138 aa4.88□□□□□ -1.63
TRAPPC11-205ENST00000506426 PEAR1Q5VY43 1037 aaPredicted RBP4.88□□□□□ -1.63
TRAPPC11-205ENST00000506426 DPH6Q7L8W6 267 aa4.88□□□□□ -1.63
TRAPPC11-205ENST00000506426 NCAPG2Q86XI2 1143 aa4.88□□□□□ -1.63
TRAPPC11-205ENST00000506426 FAM177A1Q8N128 213 aaPredicted RBP4.88□□□□□ -1.63
TRAPPC11-205ENST00000506426 DHX38Q92620 1227 aaKnown RBP4.88□□□□□ -1.63
TRAPPC11-205ENST00000506426 KRTAP9-2Q9BYQ4 174 aa4.88□□□□□ -1.63
TRAPPC11-205ENST00000506426 NUCKS1Q9H1E3 243 aaKnown RBP4.88□□□□□ -1.63
TRAPPC11-205ENST00000506426 MARK1Q9P0L2 795 aa4.88□□□□□ -1.63
TRAPPC11-205ENST00000506426 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.88□□□□□ -1.63
TRAPPC11-205ENST00000506426 KRTAP9-6A0A140TA67 174 aa4.87□□□□□ -1.63
TRAPPC11-205ENST00000506426 TMEM238LA0A1B0GVL6 79 aa4.87□□□□□ -1.63
TRAPPC11-205ENST00000506426 DCDC2BA2VCK2 349 aa4.87□□□□□ -1.63
TRAPPC11-205ENST00000506426 MAPTP10636 758 aaKnown RBP4.87□□□□□ -1.63
TRAPPC11-205ENST00000506426 RLBP1P12271 317 aa4.87□□□□□ -1.63
TRAPPC11-205ENST00000506426 CANXP27824 592 aaKnown RBP4.87□□□□□ -1.63
TRAPPC11-205ENST00000506426 GJA8P48165 433 aa4.87□□□□□ -1.63
TRAPPC11-205ENST00000506426 MAP3K10Q02779 954 aa4.87□□□□□ -1.63
TRAPPC11-205ENST00000506426 SRSF11Q05519 484 aaKnown RBP4.87□□□□□ -1.63
TRAPPC11-205ENST00000506426 HYAL2Q12891 473 aa4.87□□□□□ -1.63
TRAPPC11-205ENST00000506426 CCDC85BQ15834 202 aaPredicted RBP4.87□□□□□ -1.63
TRAPPC11-205ENST00000506426 SOGA3Q5TF21 947 aa4.87□□□□□ -1.63
TRAPPC11-205ENST00000506426 PRPF40BQ6NWY9 871 aaKnown RBP4.87□□□□□ -1.63
TRAPPC11-205ENST00000506426 DTHD1Q6ZMT9 781 aa4.87□□□□□ -1.63
TRAPPC11-205ENST00000506426 C3orf58Q8NDZ4 430 aa4.87□□□□□ -1.63
TRAPPC11-205ENST00000506426 GLIS3Q8NEA6 775 aa4.87□□□□□ -1.63
TRAPPC11-205ENST00000506426 ANKRD24Q8TF21 1146 aa4.87□□□□□ -1.63
TRAPPC11-205ENST00000506426 DNAJC2Q99543 621 aaKnown RBP4.87□□□□□ -1.63
TRAPPC11-205ENST00000506426 OXCT2Q9BYC2 517 aaPredicted RBP4.87□□□□□ -1.63
TRAPPC11-205ENST00000506426 LIN7BQ9HAP6 207 aa4.87□□□□□ -1.63
TRAPPC11-205ENST00000506426 COPRSQ9NQ92 184 aa4.87□□□□□ -1.63
TRAPPC11-205ENST00000506426 LATS2Q9NRM7 1088 aa4.87□□□□□ -1.63
TRAPPC11-205ENST00000506426 KBTBD4Q9NVX7 518 aa4.87□□□□□ -1.63
TRAPPC11-205ENST00000506426 TLR7Q9NYK1 1049 aaKnown RBP4.87□□□□□ -1.63
TRAPPC11-205ENST00000506426 PPM1HQ9ULR3 514 aa4.87□□□□□ -1.63
TRAPPC11-205ENST00000506426 AKAP2Q9Y2D5 859 aa4.87□□□□□ -1.63
TRAPPC11-205ENST00000506426 MAP3K6O95382 1288 aa4.86□□□□□ -1.63
TRAPPC11-205ENST00000506426 HMGB1P09429 215 aaKnown RBP4.86□□□□□ -1.63
TRAPPC11-205ENST00000506426 NFKB1P19838 968 aa4.86□□□□□ -1.63
TRAPPC11-205ENST00000506426 SOX18P35713 384 aa4.86□□□□□ -1.63
TRAPPC11-205ENST00000506426 PLAURQ03405 335 aa4.86□□□□□ -1.63
TRAPPC11-205ENST00000506426 RBL2Q08999 1139 aa4.86□□□□□ -1.63
TRAPPC11-205ENST00000506426 SPEM2Q0P670 501 aa4.86□□□□□ -1.63
TRAPPC11-205ENST00000506426 PAK2Q13177 524 aa4.86□□□□□ -1.63
TRAPPC11-205ENST00000506426 NEUROD1Q13562 356 aa4.86□□□□□ -1.63
TRAPPC11-205ENST00000506426 SV2BQ7L1I2 683 aa4.86□□□□□ -1.63
TRAPPC11-205ENST00000506426 Q8N3U1 123 aa4.86□□□□□ -1.63
TRAPPC11-205ENST00000506426 GPRASP2Q96D09 838 aa4.86□□□□□ -1.63
TRAPPC11-205ENST00000506426 GMCL1Q96IK5 515 aa4.86□□□□□ -1.63
TRAPPC11-205ENST00000506426 SPACA7Q96KW9 195 aa4.86□□□□□ -1.63
TRAPPC11-205ENST00000506426 SPATA32Q96LK8 384 aa4.86□□□□□ -1.63
TRAPPC11-205ENST00000506426 OSMRQ99650 979 aa4.86□□□□□ -1.63
TRAPPC11-205ENST00000506426 SPON2Q9BUD6 331 aa4.86□□□□□ -1.63
TRAPPC11-205ENST00000506426 HIRIP3Q9BW71 556 aaPredicted RBP4.86□□□□□ -1.63
TRAPPC11-205ENST00000506426 ZFATQ9P243 1243 aa4.86□□□□□ -1.63
TRAPPC11-205ENST00000506426 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.86□□□□□ -1.63
TRAPPC11-205ENST00000506426 MINDY4BA8MYZ0 360 aa4.85□□□□□ -1.63
TRAPPC11-205ENST00000506426 BNIP3LO60238 219 aa4.85□□□□□ -1.63
TRAPPC11-205ENST00000506426 SMARCA5O60264 1052 aaPredicted RBP4.85□□□□□ -1.63
TRAPPC11-205ENST00000506426 KIF4AO95239 1232 aa4.85□□□□□ -1.63
TRAPPC11-205ENST00000506426 THBS1P07996 1170 aa4.85□□□□□ -1.63
TRAPPC11-205ENST00000506426 FURINP09958 794 aa4.85□□□□□ -1.63
TRAPPC11-205ENST00000506426 HOXD8P13378 290 aaPredicted RBP4.85□□□□□ -1.63
TRAPPC11-205ENST00000506426 ATF4P18848 351 aaPredicted RBP4.85□□□□□ -1.63
TRAPPC11-205ENST00000506426 GBP2P32456 591 aaPredicted RBP4.85□□□□□ -1.63
TRAPPC11-205ENST00000506426 UBAP2LQ14157 1087 aaKnown RBP4.85□□□□□ -1.63
TRAPPC11-205ENST00000506426 DBN1Q16643 649 aa4.85□□□□□ -1.63
TRAPPC11-205ENST00000506426 CCNJLQ8IV13 435 aa4.85□□□□□ -1.63
TRAPPC11-205ENST00000506426 KIAA0825Q8IV33 1275 aa4.85□□□□□ -1.63
TRAPPC11-205ENST00000506426 TRIM22Q8IYM9 498 aa4.85□□□□□ -1.63
TRAPPC11-205ENST00000506426 RASGRP4Q8TDF6 673 aa4.85□□□□□ -1.63
TRAPPC11-205ENST00000506426 BHMTQ93088 406 aa4.85□□□□□ -1.63
TRAPPC11-205ENST00000506426 ACDQ96AP0 544 aa4.85□□□□□ -1.63
TRAPPC11-205ENST00000506426 TCF12Q99081 682 aa4.85□□□□□ -1.63
TRAPPC11-205ENST00000506426 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.85□□□□□ -1.63
TRAPPC11-205ENST00000506426 LNPKQ9C0E8 428 aa4.85□□□□□ -1.63
TRAPPC11-205ENST00000506426 CEP44Q9C0F1 390 aa4.85□□□□□ -1.63
TRAPPC11-205ENST00000506426 ABCB6Q9NP58 842 aa4.85□□□□□ -1.63
TRAPPC11-205ENST00000506426 STRN4Q9NRL3 753 aa4.85□□□□□ -1.63
TRAPPC11-205ENST00000506426 IGF1RP08069 1367 aa4.85□□□□□ -1.63
TRAPPC11-205ENST00000506426 KRBA1A5PL33 1030 aa4.84□□□□□ -1.63
TRAPPC11-205ENST00000506426 STK10O94804 968 aaKnown RBP4.84□□□□□ -1.63
TRAPPC11-205ENST00000506426 EIF4A3P38919 411 aaKnown RBP4.84□□□□□ -1.63
TRAPPC11-205ENST00000506426 NRLP54845 237 aa4.84□□□□□ -1.63
TRAPPC11-205ENST00000506426 SNRPNP63162 240 aaKnown RBP4.84□□□□□ -1.63
TRAPPC11-205ENST00000506426 COL13A1Q5TAT6 717 aaPredicted RBP4.84□□□□□ -1.63
TRAPPC11-205ENST00000506426 DHX32Q7L7V1 743 aaKnown RBP4.84□□□□□ -1.63
TRAPPC11-205ENST00000506426 NOP9Q86U38 636 aaKnown RBP4.84□□□□□ -1.63
TRAPPC11-205ENST00000506426 MCF2L2Q86YR7 1114 aa4.84□□□□□ -1.63
TRAPPC11-205ENST00000506426 CEP120Q8N960 986 aa4.84□□□□□ -1.63
TRAPPC11-205ENST00000506426 GALNT6Q8NCL4 622 aa4.84□□□□□ -1.63
TRAPPC11-205ENST00000506426 NEDD1Q8NHV4 660 aa4.84□□□□□ -1.63
TRAPPC11-205ENST00000506426 ZNF837Q96EG3 531 aaPredicted RBP4.84□□□□□ -1.63
TRAPPC11-205ENST00000506426 SEC16BQ96JE7 1060 aa4.84□□□□□ -1.63
TRAPPC11-205ENST00000506426 TMEM74Q96NL1 305 aa4.84□□□□□ -1.63
TRAPPC11-205ENST00000506426 PSMG3-AS1Q96PY0 264 aa4.84□□□□□ -1.63
TRAPPC11-205ENST00000506426 PUS7Q96PZ0 661 aaKnown RBP4.84□□□□□ -1.63
TRAPPC11-205ENST00000506426 SLC30A3Q99726 388 aa4.84□□□□□ -1.63
TRAPPC11-205ENST00000506426 ZKSCAN3Q9BRR0 538 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms