RNA–Protein interactions for RNA: ENST00000506409.1

MED28-204, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 347 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-204ENST00000506409 TRPM4Q8TD43 1214 aa19.5■□□□□ 0.71
MED28-204ENST00000506409 A0A1B0GUL6 1792 aa19.49■□□□□ 0.71
MED28-204ENST00000506409 PSME4Q14997 1843 aa19.49■□□□□ 0.71
MED28-204ENST00000506409 TRIM27P14373 513 aa19.49■□□□□ 0.71
MED28-204ENST00000506409 ATF7IPQ6VMQ6 1270 aa19.49■□□□□ 0.71
MED28-204ENST00000506409 PUS3Q9BZE2 481 aaKnown RBP19.49■□□□□ 0.71
MED28-204ENST00000506409 HIRAP54198 1017 aaPredicted RBP19.48■□□□□ 0.71
MED28-204ENST00000506409 INTS3Q68E01 1043 aaKnown RBP19.48■□□□□ 0.71
MED28-204ENST00000506409 C15orf52Q6ZUT6 534 aaKnown RBP19.48■□□□□ 0.71
MED28-204ENST00000506409 SAMD7Q7Z3H4 446 aa19.48■□□□□ 0.71
MED28-204ENST00000506409 AGBL3Q8NEM8 1001 aa19.48■□□□□ 0.71
MED28-204ENST00000506409 ZC3H15Q8WU90 426 aaKnown RBP19.48■□□□□ 0.71
MED28-204ENST00000506409 CREBZFQ9NS37 354 aa19.48■□□□□ 0.71
MED28-204ENST00000506409 HDAC5Q9UQL6 1122 aa19.48■□□□□ 0.71
MED28-204ENST00000506409 ZNF609O15014 1411 aa19.48■□□□□ 0.71
MED28-204ENST00000506409 TBC1D10BQ4KMP7 808 aaPredicted RBP19.47■□□□□ 0.71
MED28-204ENST00000506409 FBXW7Q969H0 707 aa19.47■□□□□ 0.71
MED28-204ENST00000506409 KLRG1Q96E93 195 aa19.47■□□□□ 0.71
MED28-204ENST00000506409 RIPOR2Q9Y4F9 1068 aa19.47■□□□□ 0.71
MED28-204ENST00000506409 MROH5Q6ZUA9 1318 aa19.47■□□□□ 0.71
MED28-204ENST00000506409 IRS2Q9Y4H2 1338 aa19.47■□□□□ 0.71
MED28-204ENST00000506409 RBM26Q5T8P6 1007 aaKnown RBP19.46■□□□□ 0.71
MED28-204ENST00000506409 STRIP1Q5VSL9 837 aa19.46■□□□□ 0.71
MED28-204ENST00000506409 KLHDC4Q8TBB5 520 aa19.46■□□□□ 0.71
MED28-204ENST00000506409 MEIS3Q99687 375 aa19.46■□□□□ 0.71
MED28-204ENST00000506409 CD209Q9NNX6 404 aa19.46■□□□□ 0.71
MED28-204ENST00000506409 PGAP2Q9UHJ9 254 aa19.46■□□□□ 0.71
MED28-204ENST00000506409 TMEM88BA6NKF7 163 aa19.45■□□□□ 0.7
MED28-204ENST00000506409 EGFRP00533 1210 aa19.45■□□□□ 0.7
MED28-204ENST00000506409 UBE4AQ14139 1066 aa19.45■□□□□ 0.7
MED28-204ENST00000506409 LRRC24Q50LG9 513 aa19.45■□□□□ 0.7
MED28-204ENST00000506409 DACT2Q5SW24 774 aa19.45■□□□□ 0.7
MED28-204ENST00000506409 ZKSCAN2Q63HK3 967 aa19.45■□□□□ 0.7
MED28-204ENST00000506409 ZNF804AQ7Z570 1209 aa19.45■□□□□ 0.7
MED28-204ENST00000506409 CLUAP1Q96AJ1 413 aa19.45■□□□□ 0.7
MED28-204ENST00000506409 GMLQ99445 158 aa19.45■□□□□ 0.7
MED28-204ENST00000506409 TNNQ9UQP3 1299 aa19.45■□□□□ 0.7
MED28-204ENST00000506409 LRRFIP2Q9Y608 721 aaKnown RBP19.45■□□□□ 0.7
MED28-204ENST00000506409 GNAI3P08754 354 aa19.44■□□□□ 0.7
MED28-204ENST00000506409 USP17L8P0C7I0 530 aa19.44■□□□□ 0.7
MED28-204ENST00000506409 ZNF280AP59817 542 aaPredicted RBP19.44■□□□□ 0.7
MED28-204ENST00000506409 KIF4BQ2VIQ3 1234 aa19.44■□□□□ 0.7
MED28-204ENST00000506409 METTL24Q5JXM2 366 aa19.44■□□□□ 0.7
MED28-204ENST00000506409 TTLL5Q6EMB2 1281 aa19.44■□□□□ 0.7
MED28-204ENST00000506409 MYO3BQ8WXR4 1341 aa19.44■□□□□ 0.7
MED28-204ENST00000506409 TRAF5O00463 557 aa19.43■□□□□ 0.7
MED28-204ENST00000506409 RFX5P48382 616 aaPredicted RBP19.43■□□□□ 0.7
MED28-204ENST00000506409 GTF2IP78347 998 aa19.43■□□□□ 0.7
MED28-204ENST00000506409 MXD3Q9BW11 206 aa19.43■□□□□ 0.7
MED28-204ENST00000506409 FMR1Q06787 632 aaKnown RBP eCLIP19.42■□□□□ 0.7
MED28-204ENST00000506409 CDC37L1Q7L3B6 337 aa19.42■□□□□ 0.7
MED28-204ENST00000506409 GLIS2Q9BZE0 524 aaPredicted RBP19.42■□□□□ 0.7
MED28-204ENST00000506409 ZNF646O15015 1829 aaPredicted RBP19.41■□□□□ 0.7
MED28-204ENST00000506409 EYA2O00167 538 aa19.41■□□□□ 0.7
MED28-204ENST00000506409 IL1R1P14778 569 aa19.41■□□□□ 0.7
MED28-204ENST00000506409 PTPN12Q05209 780 aaKnown RBP19.41■□□□□ 0.7
MED28-204ENST00000506409 OGFOD1Q8N543 542 aa19.41■□□□□ 0.7
MED28-204ENST00000506409 MYOZ2Q9NPC6 264 aa19.41■□□□□ 0.7
MED28-204ENST00000506409 PDE8BO95263 885 aa19.4■□□□□ 0.7
MED28-204ENST00000506409 TMEM57Q8N5G2 664 aa19.4■□□□□ 0.7
MED28-204ENST00000506409 VGLL2Q8N8G2 317 aa19.4■□□□□ 0.7
MED28-204ENST00000506409 DCPSQ96C86 337 aaKnown RBP19.4■□□□□ 0.7
MED28-204ENST00000506409 MKRN1Q9UHC7 482 aaKnown RBP19.4■□□□□ 0.7
MED28-204ENST00000506409 HIBADHP31937 336 aaKnown RBP19.39■□□□□ 0.69
MED28-204ENST00000506409 GYG1P46976 350 aa19.39■□□□□ 0.69
MED28-204ENST00000506409 KRT26Q7Z3Y9 468 aa19.39■□□□□ 0.69
MED28-204ENST00000506409 FTSJ3Q8IY81 847 aaKnown RBP19.39■□□□□ 0.69
MED28-204ENST00000506409 JMYQ8N9B5 988 aa19.39■□□□□ 0.69
MED28-204ENST00000506409 SIL1Q9H173 461 aa19.39■□□□□ 0.69
MED28-204ENST00000506409 GGA3Q9NZ52 723 aa19.39■□□□□ 0.69
MED28-204ENST00000506409 ABT1Q9ULW3 272 aaKnown RBP19.39■□□□□ 0.69
MED28-204ENST00000506409 CNTNAP1P78357 1384 aa19.38■□□□□ 0.69
MED28-204ENST00000506409 SCARF1Q14162 830 aa19.38■□□□□ 0.69
MED28-204ENST00000506409 CST9Q5W186 159 aa19.38■□□□□ 0.69
MED28-204ENST00000506409 USP48Q86UV5 1035 aa19.38■□□□□ 0.69
MED28-204ENST00000506409 KIAA0825Q8IV33 1275 aa19.38■□□□□ 0.69
MED28-204ENST00000506409 FAM84BQ96KN1 310 aaPredicted RBP19.38■□□□□ 0.69
MED28-204ENST00000506409 FBXO3Q9UK99 471 aa19.38■□□□□ 0.69
MED28-204ENST00000506409 TRPM7Q96QT4 1865 aa19.37■□□□□ 0.69
MED28-204ENST00000506409 ASTN2O75129 1339 aaPredicted RBP19.37■□□□□ 0.69
MED28-204ENST00000506409 CELF2O95319 508 aaKnown RBP19.37■□□□□ 0.69
MED28-204ENST00000506409 GNAI2P04899 355 aa19.37■□□□□ 0.69
MED28-204ENST00000506409 MMP14P50281 582 aa19.37■□□□□ 0.69
MED28-204ENST00000506409 PUM3Q15397 648 aaKnown RBP19.37■□□□□ 0.69
MED28-204ENST00000506409 ATG9AQ7Z3C6 839 aa19.37■□□□□ 0.69
MED28-204ENST00000506409 VPS37DQ86XT2 251 aa19.37■□□□□ 0.69
MED28-204ENST00000506409 DZIP1LQ8IYY4 767 aaKnown RBP19.37■□□□□ 0.69
MED28-204ENST00000506409 HDAC9Q9UKV0 1011 aa19.37■□□□□ 0.69
MED28-204ENST00000506409 SRGAP3O43295 1099 aa19.36■□□□□ 0.69
MED28-204ENST00000506409 CIAO1O76071 339 aa19.36■□□□□ 0.69
MED28-204ENST00000506409 SASH1O94885 1247 aa19.36■□□□□ 0.69
MED28-204ENST00000506409 CAVIN4Q5BKX8 364 aa19.36■□□□□ 0.69
MED28-204ENST00000506409 ANGEL2Q5VTE6 544 aaKnown RBP19.36■□□□□ 0.69
MED28-204ENST00000506409 SULF1Q8IWU6 871 aa19.36■□□□□ 0.69
MED28-204ENST00000506409 CERS5Q8N5B7 392 aa19.36■□□□□ 0.69
MED28-204ENST00000506409 TDRD7Q8NHU6 1098 aaKnown RBP19.36■□□□□ 0.69
MED28-204ENST00000506409 ZNF408Q9H9D4 720 aa19.36■□□□□ 0.69
MED28-204ENST00000506409 JAG2Q9Y219 1238 aa19.36■□□□□ 0.69
MED28-204ENST00000506409 RASSF10A6NK89 507 aa19.35■□□□□ 0.69
MED28-204ENST00000506409 ADM5C9JUS6 153 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms