RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 HELBQ8NG08 1087 aaPredicted RBP21.26■□□□□ 0.99
PDLIM7-215ENST00000506161 ZNF609O15014 1411 aa21.25■□□□□ 0.99
PDLIM7-215ENST00000506161 IGHMBP2P38935 993 aaKnown RBP21.25■□□□□ 0.99
PDLIM7-215ENST00000506161 ECE1P42892 770 aa21.25■□□□□ 0.99
PDLIM7-215ENST00000506161 CHRNDQ07001 517 aa21.25■□□□□ 0.99
PDLIM7-215ENST00000506161 PAXIP1Q6ZW49 1069 aaPredicted RBP21.25■□□□□ 0.99
PDLIM7-215ENST00000506161 GMLQ99445 158 aa21.25■□□□□ 0.99
PDLIM7-215ENST00000506161 TAF5LO75529 589 aa21.24■□□□□ 0.99
PDLIM7-215ENST00000506161 ALDH1L1O75891 902 aa21.24■□□□□ 0.99
PDLIM7-215ENST00000506161 RBM26Q5T8P6 1007 aaKnown RBP21.24■□□□□ 0.99
PDLIM7-215ENST00000506161 CAPNS2Q96L46 248 aa21.24■□□□□ 0.99
PDLIM7-215ENST00000506161 SRCIN1Q9C0H9 1055 aa21.24■□□□□ 0.99
PDLIM7-215ENST00000506161 RSBN1LQ6PCB5 846 aaPredicted RBP21.23■□□□□ 0.99
PDLIM7-215ENST00000506161 MIER1Q8N108 512 aa21.23■□□□□ 0.99
PDLIM7-215ENST00000506161 CHMP3Q9Y3E7 222 aa21.23■□□□□ 0.99
PDLIM7-215ENST00000506161 ANKRD18BA2A2Z9 1011 aa21.22■□□□□ 0.99
PDLIM7-215ENST00000506161 H7C1D1 291 aa21.22■□□□□ 0.99
PDLIM7-215ENST00000506161 RPS12P25398 132 aaKnown RBP21.22■□□□□ 0.99
PDLIM7-215ENST00000506161 GRM1Q13255 1194 aa21.22■□□□□ 0.99
PDLIM7-215ENST00000506161 ZNF804BA4D1E1 1349 aa21.22■□□□□ 0.99
PDLIM7-215ENST00000506161 UTYO14607 1347 aa21.22■□□□□ 0.99
PDLIM7-215ENST00000506161 G3V3G9 751 aa21.21■□□□□ 0.99
PDLIM7-215ENST00000506161 DCAF8Q5TAQ9 597 aa21.21■□□□□ 0.99
PDLIM7-215ENST00000506161 CYP4F22Q6NT55 531 aa21.21■□□□□ 0.99
PDLIM7-215ENST00000506161 USP48Q86UV5 1035 aa21.21■□□□□ 0.99
PDLIM7-215ENST00000506161 MPHOSPH8Q99549 860 aa21.21■□□□□ 0.99
PDLIM7-215ENST00000506161 PUS3Q9BZE2 481 aaKnown RBP21.21■□□□□ 0.99
PDLIM7-215ENST00000506161 C9orf78Q9NZ63 289 aaPredicted RBP21.21■□□□□ 0.99
PDLIM7-215ENST00000506161 ADM5C9JUS6 153 aa21.2■□□□□ 0.98
PDLIM7-215ENST00000506161 IFIT5Q13325 482 aaKnown RBP21.2■□□□□ 0.98
PDLIM7-215ENST00000506161 KIF4BQ2VIQ3 1234 aa21.2■□□□□ 0.98
PDLIM7-215ENST00000506161 DACT2Q5SW24 774 aa21.2■□□□□ 0.98
PDLIM7-215ENST00000506161 ANKRD44Q8N8A2 993 aa21.2■□□□□ 0.98
PDLIM7-215ENST00000506161 ZC3H15Q8WU90 426 aaKnown RBP21.2■□□□□ 0.98
PDLIM7-215ENST00000506161 LEMD3Q9Y2U8 911 aa21.2■□□□□ 0.98
PDLIM7-215ENST00000506161 USP17L3A6NCW0 530 aa21.19■□□□□ 0.98
PDLIM7-215ENST00000506161 USP17L4A6NCW7 530 aa21.19■□□□□ 0.98
PDLIM7-215ENST00000506161 CELF2O95319 508 aaKnown RBP21.19■□□□□ 0.98
PDLIM7-215ENST00000506161 ZNF280AP59817 542 aaPredicted RBP21.19■□□□□ 0.98
PDLIM7-215ENST00000506161 USP17L1Q7RTZ2 530 aa21.19■□□□□ 0.98
PDLIM7-215ENST00000506161 PODNQ7Z5L7 613 aa21.19■□□□□ 0.98
PDLIM7-215ENST00000506161 BICC1Q9H694 974 aaKnown RBP21.19■□□□□ 0.98
PDLIM7-215ENST00000506161 SCAF8Q9UPN6 1271 aaKnown RBP21.19■□□□□ 0.98
PDLIM7-215ENST00000506161 TSKSQ9UJT2 592 aa21.18■□□□□ 0.98
PDLIM7-215ENST00000506161 TLL2Q9Y6L7 1015 aa21.18■□□□□ 0.98
PDLIM7-215ENST00000506161 PTPRCP08575 1304 aa21.18■□□□□ 0.98
PDLIM7-215ENST00000506161 AGBL3Q8NEM8 1001 aa21.17■□□□□ 0.98
PDLIM7-215ENST00000506161 MCOLN1Q9GZU1 580 aa21.17■□□□□ 0.98
PDLIM7-215ENST00000506161 ANKRD2Q9GZV1 360 aa21.17■□□□□ 0.98
PDLIM7-215ENST00000506161 USP44Q9H0E7 712 aa21.17■□□□□ 0.98
PDLIM7-215ENST00000506161 ZNF408Q9H9D4 720 aa21.17■□□□□ 0.98
PDLIM7-215ENST00000506161 SMC4Q9NTJ3 1288 aa21.17■□□□□ 0.98
PDLIM7-215ENST00000506161 GGA3Q9NZ52 723 aa21.17■□□□□ 0.98
PDLIM7-215ENST00000506161 ECM29Q5VYK3 1845 aa21.16■□□□□ 0.98
PDLIM7-215ENST00000506161 MAP2K2P36507 400 aa21.16■□□□□ 0.98
PDLIM7-215ENST00000506161 ALDH1L2Q3SY69 923 aa21.16■□□□□ 0.98
PDLIM7-215ENST00000506161 RABL6Q3YEC7 729 aaPredicted RBP21.16■□□□□ 0.98
PDLIM7-215ENST00000506161 CDC37L1Q7L3B6 337 aa21.16■□□□□ 0.98
PDLIM7-215ENST00000506161 COA1Q9GZY4 146 aa21.16■□□□□ 0.98
PDLIM7-215ENST00000506161 ARAP2Q8WZ64 1704 aa21.15■□□□□ 0.98
PDLIM7-215ENST00000506161 CA12O43570 354 aa21.15■□□□□ 0.98
PDLIM7-215ENST00000506161 PLIN1O60240 522 aa21.15■□□□□ 0.98
PDLIM7-215ENST00000506161 SAPCD2Q86UD0 394 aa21.15■□□□□ 0.98
PDLIM7-215ENST00000506161 KLHDC4Q8TBB5 520 aa21.15■□□□□ 0.98
PDLIM7-215ENST00000506161 FBXW7Q969H0 707 aa21.15■□□□□ 0.98
PDLIM7-215ENST00000506161 CD209Q9NNX6 404 aa21.15■□□□□ 0.98
PDLIM7-215ENST00000506161 CCDC57Q2TAC2 916 aa21.14■□□□□ 0.97
PDLIM7-215ENST00000506161 LDHAL6AQ6ZMR3 332 aa21.14■□□□□ 0.97
PDLIM7-215ENST00000506161 KRT26Q7Z3Y9 468 aa21.14■□□□□ 0.97
PDLIM7-215ENST00000506161 CERS5Q8N5B7 392 aa21.14■□□□□ 0.97
PDLIM7-215ENST00000506161 TNNQ9UQP3 1299 aa21.14■□□□□ 0.97
PDLIM7-215ENST00000506161 AOC2O75106 756 aa21.13■□□□□ 0.97
PDLIM7-215ENST00000506161 USP17L8P0C7I0 530 aa21.13■□□□□ 0.97
PDLIM7-215ENST00000506161 GTF2IP78347 998 aa21.13■□□□□ 0.97
PDLIM7-215ENST00000506161 SCARF1Q14162 830 aa21.13■□□□□ 0.97
PDLIM7-215ENST00000506161 NBPF9Q3BBW0 867 aa21.13■□□□□ 0.97
PDLIM7-215ENST00000506161 LRRC24Q50LG9 513 aa21.13■□□□□ 0.97
PDLIM7-215ENST00000506161 ANGEL2Q5VTE6 544 aaKnown RBP21.13■□□□□ 0.97
PDLIM7-215ENST00000506161 C15orf52Q6ZUT6 534 aaKnown RBP21.13■□□□□ 0.97
PDLIM7-215ENST00000506161 MYOZ2Q9NPC6 264 aa21.13■□□□□ 0.97
PDLIM7-215ENST00000506161 NOB1Q9ULX3 412 aaKnown RBP21.13■□□□□ 0.97
PDLIM7-215ENST00000506161 JAG2Q9Y219 1238 aa21.13■□□□□ 0.97
PDLIM7-215ENST00000506161 PCDHAC2Q9Y5I4 1007 aa21.13■□□□□ 0.97
PDLIM7-215ENST00000506161 KCNJ4P48050 445 aa21.12■□□□□ 0.97
PDLIM7-215ENST00000506161 STRIP1Q5VSL9 837 aa21.12■□□□□ 0.97
PDLIM7-215ENST00000506161 DIEXFQ68CQ4 756 aaKnown RBP21.12■□□□□ 0.97
PDLIM7-215ENST00000506161 ZIC5Q96T25 663 aa21.12■□□□□ 0.97
PDLIM7-215ENST00000506161 CNNM1Q9NRU3 951 aa21.12■□□□□ 0.97
PDLIM7-215ENST00000506161 RIPOR2Q9Y4F9 1068 aa21.12■□□□□ 0.97
PDLIM7-215ENST00000506161 RARSP54136 660 aaKnown RBP21.11■□□□□ 0.97
PDLIM7-215ENST00000506161 AOX1Q06278 1338 aa21.1■□□□□ 0.97
PDLIM7-215ENST00000506161 RFX5P48382 616 aaPredicted RBP21.1■□□□□ 0.97
PDLIM7-215ENST00000506161 TAF7LQ5H9L4 462 aa21.1■□□□□ 0.97
PDLIM7-215ENST00000506161 TTLL5Q6EMB2 1281 aa21.1■□□□□ 0.97
PDLIM7-215ENST00000506161 KIAA0825Q8IV33 1275 aa21.1■□□□□ 0.97
PDLIM7-215ENST00000506161 DCPSQ96C86 337 aaKnown RBP21.1■□□□□ 0.97
PDLIM7-215ENST00000506161 MYH13Q9UKX3 1938 aa21.1■□□□□ 0.97
PDLIM7-215ENST00000506161 SASH1O94885 1247 aa21.09■□□□□ 0.97
PDLIM7-215ENST00000506161 DGKZQ13574 1117 aa21.09■□□□□ 0.97
PDLIM7-215ENST00000506161 PRAMEF18Q5VWM3 479 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms