RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, human

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1I3-222	ENST00000506018	TAF7L	Q5H9L4	462 aa		13.19	□□□□□ -0.3
NR1I3-222	ENST00000506018	RSBN1L	Q6PCB5	846 aa	Predicted RBP	13.19	□□□□□ -0.3
NR1I3-222	ENST00000506018	SLC4A10	Q6U841	1118 aa		13.19	□□□□□ -0.3
NR1I3-222	ENST00000506018	USP17L1	Q7RTZ2	530 aa		13.19	□□□□□ -0.3
NR1I3-222	ENST00000506018	SAMD7	Q7Z3H4	446 aa		13.19	□□□□□ -0.3
NR1I3-222	ENST00000506018	GLIS2	Q9BZE0	524 aa	Predicted RBP	13.19	□□□□□ -0.3
NR1I3-222	ENST00000506018	SRCIN1	Q9C0H9	1055 aa		13.19	□□□□□ -0.3
NR1I3-222	ENST00000506018	TLL2	Q9Y6L7	1015 aa		13.19	□□□□□ -0.3
NR1I3-222	ENST00000506018	ZNF609	O15014	1411 aa		13.18	□□□□□ -0.3
NR1I3-222	ENST00000506018	WDR33	Q9C0J8	1336 aa	Known RBP	13.18	□□□□□ -0.3
NR1I3-222	ENST00000506018	HIRA	P54198	1017 aa	Predicted RBP	13.18	□□□□□ -0.3
NR1I3-222	ENST00000506018	CCDC57	Q2TAC2	916 aa		13.18	□□□□□ -0.3
NR1I3-222	ENST00000506018	RBM26	Q5T8P6	1007 aa	Known RBP	13.18	□□□□□ -0.3
NR1I3-222	ENST00000506018	BEGAIN	Q9BUH8	593 aa		13.18	□□□□□ -0.3
NR1I3-222	ENST00000506018	COA1	Q9GZY4	146 aa		13.18	□□□□□ -0.3
NR1I3-222	ENST00000506018	ZNF408	Q9H9D4	720 aa		13.18	□□□□□ -0.3
NR1I3-222	ENST00000506018	KCNQ5	Q9NR82	932 aa		13.18	□□□□□ -0.3
NR1I3-222	ENST00000506018	ZNF804B	A4D1E1	1349 aa		13.17	□□□□□ -0.3
NR1I3-222	ENST00000506018	PTPRC	P08575	1304 aa		13.17	□□□□□ -0.3
NR1I3-222	ENST00000506018	MYO3B	Q8WXR4	1341 aa		13.17	□□□□□ -0.3
NR1I3-222	ENST00000506018	SHTN1	A0MZ66	631 aa		13.17	□□□□□ -0.3
NR1I3-222	ENST00000506018	KRT26	Q7Z3Y9	468 aa		13.17	□□□□□ -0.3
NR1I3-222	ENST00000506018	SULF1	Q8IWU6	871 aa		13.17	□□□□□ -0.3
NR1I3-222	ENST00000506018	OGFOD1	Q8N543	542 aa		13.17	□□□□□ -0.3
NR1I3-222	ENST00000506018	FBXW7	Q969H0	707 aa		13.17	□□□□□ -0.3
NR1I3-222	ENST00000506018	USP17L8	P0C7I0	530 aa		13.16	□□□□□ -0.3
NR1I3-222	ENST00000506018	CTCF	P49711	727 aa	Predicted RBP	13.16	□□□□□ -0.3
NR1I3-222	ENST00000506018	MMP14	P50281	582 aa		13.16	□□□□□ -0.3
NR1I3-222	ENST00000506018	GRM1	Q13255	1194 aa		13.16	□□□□□ -0.3
NR1I3-222	ENST00000506018	CST9	Q5W186	159 aa		13.16	□□□□□ -0.3
NR1I3-222	ENST00000506018	TNS4	Q8IZW8	715 aa		13.16	□□□□□ -0.3
NR1I3-222	ENST00000506018	HHIPL1	Q96JK4	782 aa		13.16	□□□□□ -0.3
NR1I3-222	ENST00000506018	CAPNS2	Q96L46	248 aa		13.16	□□□□□ -0.3
NR1I3-222	ENST00000506018	FOXO4	P98177	505 aa		13.15	□□□□□ -0.3
NR1I3-222	ENST00000506018	FMR1	Q06787	632 aa	Known RBP eCLIP	13.15	□□□□□ -0.3
NR1I3-222	ENST00000506018	CHRND	Q07001	517 aa		13.15	□□□□□ -0.3
NR1I3-222	ENST00000506018	COL13A1	Q5TAT6	717 aa	Predicted RBP	13.15	□□□□□ -0.3
NR1I3-222	ENST00000506018	STRIP1	Q5VSL9	837 aa		13.15	□□□□□ -0.3
NR1I3-222	ENST00000506018	LMBR1L	Q6UX01	489 aa		13.15	□□□□□ -0.3
NR1I3-222	ENST00000506018	SAPCD2	Q86UD0	394 aa		13.15	□□□□□ -0.3
NR1I3-222	ENST00000506018	USP48	Q86UV5	1035 aa		13.15	□□□□□ -0.3
NR1I3-222	ENST00000506018		A0A1B0GUL6	1792 aa		13.15	□□□□□ -0.3
NR1I3-222	ENST00000506018	THSD7B	Q9C0I4	1608 aa		13.14	□□□□□ -0.31
NR1I3-222	ENST00000506018	MAP2K2	P36507	400 aa		13.14	□□□□□ -0.31
NR1I3-222	ENST00000506018	ZNF280A	P59817	542 aa	Predicted RBP	13.14	□□□□□ -0.31
NR1I3-222	ENST00000506018	SLFN5	Q08AF3	891 aa		13.14	□□□□□ -0.31
NR1I3-222	ENST00000506018	C2orf69	Q8N8R5	385 aa		13.14	□□□□□ -0.31
NR1I3-222	ENST00000506018	MYOZ2	Q9NPC6	264 aa		13.14	□□□□□ -0.31
NR1I3-222	ENST00000506018	CNNM1	Q9NRU3	951 aa		13.14	□□□□□ -0.31
NR1I3-222	ENST00000506018	WBP1L	Q9NX94	342 aa		13.14	□□□□□ -0.31
NR1I3-222	ENST00000506018	GGA3	Q9NZ52	723 aa		13.14	□□□□□ -0.31
NR1I3-222	ENST00000506018	HDAC9	Q9UKV0	1011 aa		13.14	□□□□□ -0.31
NR1I3-222	ENST00000506018	FOXN1	O15353	648 aa		13.13	□□□□□ -0.31
NR1I3-222	ENST00000506018	CT47B1	P0C2W7	299 aa	Predicted RBP	13.13	□□□□□ -0.31
NR1I3-222	ENST00000506018	TTLL5	Q6EMB2	1281 aa		13.13	□□□□□ -0.31
NR1I3-222	ENST00000506018	CYP4F22	Q6NT55	531 aa		13.13	□□□□□ -0.31
NR1I3-222	ENST00000506018	LDHAL6A	Q6ZMR3	332 aa		13.13	□□□□□ -0.31
NR1I3-222	ENST00000506018	ZNF804A	Q7Z570	1209 aa		13.13	□□□□□ -0.31
NR1I3-222	ENST00000506018	MRPL50	Q8N5N7	158 aa	Known RBP	13.13	□□□□□ -0.31
NR1I3-222	ENST00000506018	PRDM10	Q9NQV6	1147 aa		13.13	□□□□□ -0.31
NR1I3-222	ENST00000506018	PITPNM2	Q9BZ72	1349 aa		13.13	□□□□□ -0.31
NR1I3-222	ENST00000506018	EGFR	P00533	1210 aa		13.12	□□□□□ -0.31
NR1I3-222	ENST00000506018	SCARF1	Q14162	830 aa		13.12	□□□□□ -0.31
NR1I3-222	ENST00000506018	ALDH1L2	Q3SY69	923 aa		13.12	□□□□□ -0.31
NR1I3-222	ENST00000506018	GBA2	Q9HCG7	927 aa	Predicted RBP	13.12	□□□□□ -0.31
NR1I3-222	ENST00000506018	ZNF646	O15015	1829 aa	Predicted RBP	13.11	□□□□□ -0.31
NR1I3-222	ENST00000506018	HUNK	P57058	714 aa		13.11	□□□□□ -0.31
NR1I3-222	ENST00000506018	DACT2	Q5SW24	774 aa		13.11	□□□□□ -0.31
NR1I3-222	ENST00000506018	ANGEL2	Q5VTE6	544 aa	Known RBP	13.11	□□□□□ -0.31
NR1I3-222	ENST00000506018	C15orf52	Q6ZUT6	534 aa	Known RBP	13.11	□□□□□ -0.31
NR1I3-222	ENST00000506018	GML	Q99445	158 aa		13.11	□□□□□ -0.31
NR1I3-222	ENST00000506018	ADM5	C9JUS6	153 aa		13.1	□□□□□ -0.31
NR1I3-222	ENST00000506018	CA12	O43570	354 aa		13.1	□□□□□ -0.31
NR1I3-222	ENST00000506018	PLIN1	O60240	522 aa		13.1	□□□□□ -0.31
NR1I3-222	ENST00000506018	TAF5L	O75529	589 aa		13.1	□□□□□ -0.31
NR1I3-222	ENST00000506018	GTF2I	P78347	998 aa		13.1	□□□□□ -0.31
NR1I3-222	ENST00000506018	NOG	Q13253	232 aa		13.1	□□□□□ -0.31
NR1I3-222	ENST00000506018	TXNRD3	Q86VQ6	643 aa		13.1	□□□□□ -0.31
NR1I3-222	ENST00000506018	HELB	Q8NG08	1087 aa	Predicted RBP	13.1	□□□□□ -0.31
NR1I3-222	ENST00000506018	SSH1	Q8WYL5	1049 aa		13.1	□□□□□ -0.31
NR1I3-222	ENST00000506018	CD209	Q9NNX6	404 aa		13.1	□□□□□ -0.31
NR1I3-222	ENST00000506018	SMC4	Q9NTJ3	1288 aa		13.1	□□□□□ -0.31
NR1I3-222	ENST00000506018	UTY	O14607	1347 aa		13.1	□□□□□ -0.31
NR1I3-222	ENST00000506018	WTIP	A6NIX2	430 aa	Predicted RBP	13.09	□□□□□ -0.31
NR1I3-222	ENST00000506018	NF2	P35240	595 aa		13.09	□□□□□ -0.31
NR1I3-222	ENST00000506018	EPHA10	Q5JZY3	1008 aa		13.09	□□□□□ -0.31
NR1I3-222	ENST00000506018	CCDC102A	Q96A19	550 aa		13.09	□□□□□ -0.31
NR1I3-222	ENST00000506018	SUCLG2	Q96I99	432 aa		13.09	□□□□□ -0.31
NR1I3-222	ENST00000506018	ZNF594	Q96JF6	807 aa	Predicted RBP	13.09	□□□□□ -0.31
NR1I3-222	ENST00000506018	ECM29	Q5VYK3	1845 aa		13.09	□□□□□ -0.31
NR1I3-222	ENST00000506018	MROH5	Q6ZUA9	1318 aa		13.09	□□□□□ -0.31
NR1I3-222	ENST00000506018	AKAP11	Q9UKA4	1901 aa		13.09	□□□□□ -0.31
NR1I3-222	ENST00000506018	NBPF7	P0C2Y1	421 aa	Predicted RBP	13.08	□□□□□ -0.31
NR1I3-222	ENST00000506018	LBX1	P52954	281 aa		13.08	□□□□□ -0.31
NR1I3-222	ENST00000506018	BRPF1	P55201	1214 aa	Predicted RBP	13.08	□□□□□ -0.31
NR1I3-222	ENST00000506018	FKBP1B	P68106	108 aa		13.08	□□□□□ -0.31
NR1I3-222	ENST00000506018	UBE4A	Q14139	1066 aa		13.08	□□□□□ -0.31
NR1I3-222	ENST00000506018	RGMB	Q6NW40	437 aa		13.08	□□□□□ -0.31
NR1I3-222	ENST00000506018	CDCA5	Q96FF9	252 aa		13.08	□□□□□ -0.31
NR1I3-222	ENST00000506018	HDAC5	Q9UQL6	1122 aa		13.08	□□□□□ -0.31

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