RNA–Protein interactions for RNA: ENST00000505589.1

NEDD9-210, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-210ENST00000505589 WNT10BO00744 389 aa12.77□□□□□ -0.37
NEDD9-210ENST00000505589 PPP1R12BO60237 982 aaPredicted RBP12.77□□□□□ -0.37
NEDD9-210ENST00000505589 NEXNQ0ZGT2 675 aa12.77□□□□□ -0.37
NEDD9-210ENST00000505589 SLC10A4Q96EP9 437 aa12.77□□□□□ -0.37
NEDD9-210ENST00000505589 MYD88Q99836 296 aa12.77□□□□□ -0.37
NEDD9-210ENST00000505589 PAPPA2Q9BXP8 1791 aa12.76□□□□□ -0.37
NEDD9-210ENST00000505589 ZEB1P37275 1124 aaPredicted RBP12.76□□□□□ -0.37
NEDD9-210ENST00000505589 GNAI1P63096 354 aa12.76□□□□□ -0.37
NEDD9-210ENST00000505589 NBPF9Q3BBW0 867 aa12.76□□□□□ -0.37
NEDD9-210ENST00000505589 CCDC30Q5VVM6 783 aa12.76□□□□□ -0.37
NEDD9-210ENST00000505589 TTLL5Q6EMB2 1281 aa12.76□□□□□ -0.37
NEDD9-210ENST00000505589 METTL22Q9BUU2 404 aaPredicted RBP12.76□□□□□ -0.37
NEDD9-210ENST00000505589 ANKRD2Q9GZV1 360 aa12.76□□□□□ -0.37
NEDD9-210ENST00000505589 TRIM35Q9UPQ4 493 aa12.76□□□□□ -0.37
NEDD9-210ENST00000505589 TNRC18O15417 2968 aaPredicted RBP12.75□□□□□ -0.37
NEDD9-210ENST00000505589 MYO1BO43795 1136 aa12.75□□□□□ -0.37
NEDD9-210ENST00000505589 ASTN2O75129 1339 aaPredicted RBP12.75□□□□□ -0.37
NEDD9-210ENST00000505589 ZBTB48P10074 688 aaPredicted RBP12.75□□□□□ -0.37
NEDD9-210ENST00000505589 IGHMBP2P38935 993 aaKnown RBP12.75□□□□□ -0.37
NEDD9-210ENST00000505589 CCT4P50991 539 aaKnown RBP12.75□□□□□ -0.37
NEDD9-210ENST00000505589 KRT24Q2M2I5 525 aa12.75□□□□□ -0.37
NEDD9-210ENST00000505589 SUPT20HL1Q3ZLR7 823 aa12.75□□□□□ -0.37
NEDD9-210ENST00000505589 ZNF428Q96B54 188 aa12.75□□□□□ -0.37
NEDD9-210ENST00000505589 MED23Q9ULK4 1368 aa12.75□□□□□ -0.37
NEDD9-210ENST00000505589 MINPP1Q9UNW1 487 aa12.75□□□□□ -0.37
NEDD9-210ENST00000505589 PPP2R3BQ9Y5P8 575 aa12.75□□□□□ -0.37
NEDD9-210ENST00000505589 TAF1P21675 1872 aa12.74□□□□□ -0.37
NEDD9-210ENST00000505589 DACT2Q5SW24 774 aa12.74□□□□□ -0.37
NEDD9-210ENST00000505589 LDLRAD1Q5T700 205 aa12.74□□□□□ -0.37
NEDD9-210ENST00000505589 FBXW7Q969H0 707 aa12.74□□□□□ -0.37
NEDD9-210ENST00000505589 ERO1AQ96HE7 468 aa12.74□□□□□ -0.37
NEDD9-210ENST00000505589 IFT57Q9NWB7 429 aa12.74□□□□□ -0.37
NEDD9-210ENST00000505589 PTPN12Q05209 780 aaKnown RBP12.73□□□□□ -0.37
NEDD9-210ENST00000505589 SPRYD7Q5W111 196 aa12.73□□□□□ -0.37
NEDD9-210ENST00000505589 MOB2Q70IA6 237 aa12.73□□□□□ -0.37
NEDD9-210ENST00000505589 CCDC146Q8IYE0 955 aa12.73□□□□□ -0.37
NEDD9-210ENST00000505589 ANGEL1Q9UNK9 670 aaKnown RBP12.73□□□□□ -0.37
NEDD9-210ENST00000505589 MYBBP1AQ9BQG0 1328 aaKnown RBP12.72□□□□□ -0.37
NEDD9-210ENST00000505589 WDHD1O75717 1129 aaPredicted RBP12.72□□□□□ -0.37
NEDD9-210ENST00000505589 CTSWP56202 376 aa12.72□□□□□ -0.37
NEDD9-210ENST00000505589 MAP3K11Q16584 847 aa12.72□□□□□ -0.37
NEDD9-210ENST00000505589 PRAMEF18Q5VWM3 479 aa12.72□□□□□ -0.37
NEDD9-210ENST00000505589 KSR2Q6VAB6 950 aa12.72□□□□□ -0.37
NEDD9-210ENST00000505589 NBPF11Q86T75 865 aa12.72□□□□□ -0.37
NEDD9-210ENST00000505589 TTLL11Q8NHH1 800 aa12.72□□□□□ -0.37
NEDD9-210ENST00000505589 CCDC85AQ96PX6 553 aaPredicted RBP12.72□□□□□ -0.37
NEDD9-210ENST00000505589 MPHOSPH8Q99549 860 aa12.72□□□□□ -0.37
NEDD9-210ENST00000505589 PHAXQ9H814 394 aaKnown RBP12.72□□□□□ -0.37
NEDD9-210ENST00000505589 MBIPQ9NS73 344 aa12.72□□□□□ -0.37
NEDD9-210ENST00000505589 TRIM17Q9Y577 477 aa12.72□□□□□ -0.37
NEDD9-210ENST00000505589 KCNJ4P48050 445 aa12.71□□□□□ -0.37
NEDD9-210ENST00000505589 DLGAP5Q15398 846 aa12.71□□□□□ -0.37
NEDD9-210ENST00000505589 IFNL1Q8IU54 200 aa12.71□□□□□ -0.37
NEDD9-210ENST00000505589 TMEM106CQ9BVX2 250 aa12.71□□□□□ -0.37
NEDD9-210ENST00000505589 DEFB129Q9H1M3 183 aa12.71□□□□□ -0.37
NEDD9-210ENST00000505589 COL1A1P02452 1464 aaPredicted RBP12.71□□□□□ -0.38
NEDD9-210ENST00000505589 ZNF804BA4D1E1 1349 aa12.7□□□□□ -0.38
NEDD9-210ENST00000505589 ZNF853P0CG23 659 aa12.7□□□□□ -0.38
NEDD9-210ENST00000505589 IREB2P48200 963 aaKnown RBP12.7□□□□□ -0.38
NEDD9-210ENST00000505589 MKRN3Q13064 507 aaKnown RBP12.7□□□□□ -0.38
NEDD9-210ENST00000505589 MTMR14Q8NCE2 650 aa12.7□□□□□ -0.38
NEDD9-210ENST00000505589 STK31Q9BXU1 1019 aa12.7□□□□□ -0.38
NEDD9-210ENST00000505589 ADAMTS8Q9UP79 889 aa12.7□□□□□ -0.38
NEDD9-210ENST00000505589 MAP3K2Q9Y2U5 619 aa12.7□□□□□ -0.38
NEDD9-210ENST00000505589 SCN9AQ15858 1988 aa12.69□□□□□ -0.38
NEDD9-210ENST00000505589 ELL2O00472 640 aaPredicted RBP12.69□□□□□ -0.38
NEDD9-210ENST00000505589 GTF2IP78347 998 aa12.69□□□□□ -0.38
NEDD9-210ENST00000505589 PRKG1Q13976 671 aa12.69□□□□□ -0.38
NEDD9-210ENST00000505589 HABP4Q5JVS0 413 aaKnown RBP12.69□□□□□ -0.38
NEDD9-210ENST00000505589 OTOP1Q7RTM1 612 aa12.69□□□□□ -0.38
NEDD9-210ENST00000505589 KIAA0825Q8IV33 1275 aa12.69□□□□□ -0.38
NEDD9-210ENST00000505589 EFCC1Q9HA90 598 aa12.69□□□□□ -0.38
NEDD9-210ENST00000505589 PI4KAP2A4QPH2 592 aa12.68□□□□□ -0.38
NEDD9-210ENST00000505589 FKBP1AP62942 108 aaKnown RBP12.68□□□□□ -0.38
NEDD9-210ENST00000505589 SP3Q02447 781 aa12.68□□□□□ -0.38
NEDD9-210ENST00000505589 TNFAIP1Q13829 316 aa12.68□□□□□ -0.38
NEDD9-210ENST00000505589 ANKRD13AQ8IZ07 590 aa12.68□□□□□ -0.38
NEDD9-210ENST00000505589 PI4KAP1Q8N8J0 262 aa12.68□□□□□ -0.38
NEDD9-210ENST00000505589 GREM2Q9H772 168 aa12.68□□□□□ -0.38
NEDD9-210ENST00000505589 PTPN22Q9Y2R2 807 aa12.68□□□□□ -0.38
NEDD9-210ENST00000505589 PPP4R3CPQ6ZMV5 832 aa12.67□□□□□ -0.38
NEDD9-210ENST00000505589 ZBED3Q96IU2 234 aaPredicted RBP12.67□□□□□ -0.38
NEDD9-210ENST00000505589 PLA2G12BQ9BX93 195 aa12.67□□□□□ -0.38
NEDD9-210ENST00000505589 MYH16Q9H6N6 1097 aa12.67□□□□□ -0.38
NEDD9-210ENST00000505589 CD209Q9NNX6 404 aa12.67□□□□□ -0.38
NEDD9-210ENST00000505589 SCAF8Q9UPN6 1271 aaKnown RBP12.67□□□□□ -0.38
NEDD9-210ENST00000505589 PSME4Q14997 1843 aa12.67□□□□□ -0.38
NEDD9-210ENST00000505589 H7C1W4 665 aa12.66□□□□□ -0.38
NEDD9-210ENST00000505589 SASH1O94885 1247 aa12.66□□□□□ -0.38
NEDD9-210ENST00000505589 ITGA6P23229 1130 aa12.66□□□□□ -0.38
NEDD9-210ENST00000505589 ZNF804AQ7Z570 1209 aa12.66□□□□□ -0.38
NEDD9-210ENST00000505589 JARID2Q92833 1246 aaPredicted RBP12.66□□□□□ -0.38
NEDD9-210ENST00000505589 WNK4Q96J92 1243 aa12.66□□□□□ -0.38
NEDD9-210ENST00000505589 ANKRD18BA2A2Z9 1011 aa12.65□□□□□ -0.38
NEDD9-210ENST00000505589 TESPA1A2RU30 521 aaPredicted RBP12.65□□□□□ -0.38
NEDD9-210ENST00000505589 C15orf52Q6ZUT6 534 aaKnown RBP12.65□□□□□ -0.38
NEDD9-210ENST00000505589 ARMC5Q96C12 935 aa12.65□□□□□ -0.38
NEDD9-210ENST00000505589 MXD3Q9BW11 206 aa12.65□□□□□ -0.38
NEDD9-210ENST00000505589 ZFYVE28Q9HCC9 887 aa12.65□□□□□ -0.38
NEDD9-210ENST00000505589 NEURL1BA8MQ27 555 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms