RNA–Protein interactions for RNA: ENST00000505066.5

DDR1-256, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 556 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-256ENST00000505066 DDX60Q8IY21 1712 aaKnown RBP20.81■□□□□ 0.92
DDR1-256ENST00000505066 ADM5C9JUS6 153 aa20.8■□□□□ 0.92
DDR1-256ENST00000505066 LRRC37AA6NMS7 1700 aa20.8■□□□□ 0.92
DDR1-256ENST00000505066 ZNF280AP59817 542 aaPredicted RBP20.79■□□□□ 0.92
DDR1-256ENST00000505066 FKBP1BP68106 108 aa20.79■□□□□ 0.92
DDR1-256ENST00000505066 IFIT5Q13325 482 aaKnown RBP20.79■□□□□ 0.92
DDR1-256ENST00000505066 ANGEL2Q5VTE6 544 aaKnown RBP20.79■□□□□ 0.92
DDR1-256ENST00000505066 G2E3Q7L622 706 aa20.79■□□□□ 0.92
DDR1-256ENST00000505066 PLA2G12BQ9BX93 195 aa20.79■□□□□ 0.92
DDR1-256ENST00000505066 EXOSC9Q06265 439 aaKnown RBP20.78■□□□□ 0.92
DDR1-256ENST00000505066 STRIP1Q5VSL9 837 aa20.78■□□□□ 0.92
DDR1-256ENST00000505066 REM2Q8IYK8 340 aaPredicted RBP20.78■□□□□ 0.92
DDR1-256ENST00000505066 FAM9BQ8IZU0 186 aa20.78■□□□□ 0.92
DDR1-256ENST00000505066 ZNF804BA4D1E1 1349 aa20.78■□□□□ 0.92
DDR1-256ENST00000505066 TTLL12Q14166 644 aaPredicted RBP20.77■□□□□ 0.92
DDR1-256ENST00000505066 CDCA5Q96FF9 252 aa20.77■□□□□ 0.92
DDR1-256ENST00000505066 C9orf78Q9NZ63 289 aaPredicted RBP20.77■□□□□ 0.92
DDR1-256ENST00000505066 PITPNM2Q9BZ72 1349 aa20.77■□□□□ 0.91
DDR1-256ENST00000505066 VAMP4O75379 141 aa20.76■□□□□ 0.91
DDR1-256ENST00000505066 EGFRP00533 1210 aa20.76■□□□□ 0.91
DDR1-256ENST00000505066 CCDC57Q2TAC2 916 aa20.76■□□□□ 0.91
DDR1-256ENST00000505066 ABHD8Q96I13 439 aa20.76■□□□□ 0.91
DDR1-256ENST00000505066 FAM161AQ3B820 660 aa20.75■□□□□ 0.91
DDR1-256ENST00000505066 TTLL5Q6EMB2 1281 aa20.75■□□□□ 0.91
DDR1-256ENST00000505066 TSKSQ9UJT2 592 aa20.75■□□□□ 0.91
DDR1-256ENST00000505066 ZNF804AQ7Z570 1209 aa20.74■□□□□ 0.91
DDR1-256ENST00000505066 ZNF609O15014 1411 aa20.73■□□□□ 0.91
DDR1-256ENST00000505066 CCDC85CA6NKD9 419 aa20.73■□□□□ 0.91
DDR1-256ENST00000505066 CSF1RP07333 972 aa20.73■□□□□ 0.91
DDR1-256ENST00000505066 TRPM7Q96QT4 1865 aa20.73■□□□□ 0.91
DDR1-256ENST00000505066 PCNTO95613 3336 aa20.72■□□□□ 0.91
DDR1-256ENST00000505066 KIF23Q02241 960 aaPredicted RBP20.72■□□□□ 0.91
DDR1-256ENST00000505066 CHRNDQ07001 517 aa20.72■□□□□ 0.91
DDR1-256ENST00000505066 SLC4A10Q6U841 1118 aa20.72■□□□□ 0.91
DDR1-256ENST00000505066 GMLQ99445 158 aa20.72■□□□□ 0.91
DDR1-256ENST00000505066 CNNM1Q9NRU3 951 aa20.72■□□□□ 0.91
DDR1-256ENST00000505066 SAGE1Q9NXZ1 904 aa20.72■□□□□ 0.91
DDR1-256ENST00000505066 TAF1P21675 1872 aa20.72■□□□□ 0.91
DDR1-256ENST00000505066 MYO1BO43795 1136 aa20.71■□□□□ 0.91
DDR1-256ENST00000505066 DACT2Q5SW24 774 aa20.71■□□□□ 0.91
DDR1-256ENST00000505066 APOBEC3FQ8IUX4 373 aaKnown RBP20.71■□□□□ 0.91
DDR1-256ENST00000505066 GTF2IP78347 998 aa20.7■□□□□ 0.9
DDR1-256ENST00000505066 DLK2Q6UY11 383 aa20.7■□□□□ 0.9
DDR1-256ENST00000505066 LDHAL6AQ6ZMR3 332 aa20.7■□□□□ 0.9
DDR1-256ENST00000505066 ARMC9Q7Z3E5 817 aa20.7■□□□□ 0.9
DDR1-256ENST00000505066 SRCIN1Q9C0H9 1055 aa20.7■□□□□ 0.9
DDR1-256ENST00000505066 F6X3S4 739 aa20.69■□□□□ 0.9
DDR1-256ENST00000505066 GRM8O00222 908 aa20.69■□□□□ 0.9
DDR1-256ENST00000505066 ALDH1L1O75891 902 aa20.69■□□□□ 0.9
DDR1-256ENST00000505066 SLC10A3P09131 477 aa20.69■□□□□ 0.9
DDR1-256ENST00000505066 DGKZQ13574 1117 aa20.69■□□□□ 0.9
DDR1-256ENST00000505066 DLGAP5Q15398 846 aa20.69■□□□□ 0.9
DDR1-256ENST00000505066 KIAA0825Q8IV33 1275 aa20.69■□□□□ 0.9
DDR1-256ENST00000505066 PLIN1O60240 522 aa20.68■□□□□ 0.9
DDR1-256ENST00000505066 BEND3Q5T5X7 828 aa20.68■□□□□ 0.9
DDR1-256ENST00000505066 LMBR1LQ6UX01 489 aa20.68■□□□□ 0.9
DDR1-256ENST00000505066 ASTN2O75129 1339 aaPredicted RBP20.68■□□□□ 0.9
DDR1-256ENST00000505066 TRPA1O75762 1119 aa20.67■□□□□ 0.9
DDR1-256ENST00000505066 NBPF9Q3BBW0 867 aa20.67■□□□□ 0.9
DDR1-256ENST00000505066 FAM155AB1AL88 458 aaPredicted RBP20.66■□□□□ 0.9
DDR1-256ENST00000505066 WNT10BO00744 389 aa20.66■□□□□ 0.9
DDR1-256ENST00000505066 CASP7P55210 303 aa20.66■□□□□ 0.9
DDR1-256ENST00000505066 CD209Q9NNX6 404 aa20.66■□□□□ 0.9
DDR1-256ENST00000505066 THSD7BQ9C0I4 1608 aa20.66■□□□□ 0.9
DDR1-256ENST00000505066 TAF5LO75529 589 aa20.65■□□□□ 0.9
DDR1-256ENST00000505066 SASH1O94885 1247 aa20.65■□□□□ 0.9
DDR1-256ENST00000505066 RBM5P52756 815 aaKnown RBP eCLIP20.65■□□□□ 0.9
DDR1-256ENST00000505066 HELBQ8NG08 1087 aaPredicted RBP20.65■□□□□ 0.9
DDR1-256ENST00000505066 MXD3Q9BW11 206 aa20.65■□□□□ 0.9
DDR1-256ENST00000505066 MCOLN1Q9GZU1 580 aa20.65■□□□□ 0.9
DDR1-256ENST00000505066 COL4A1P02462 1669 aa20.64■□□□□ 0.9
DDR1-256ENST00000505066 WTIPA6NIX2 430 aaPredicted RBP20.64■□□□□ 0.89
DDR1-256ENST00000505066 TXNRD3Q86VQ6 643 aa20.64■□□□□ 0.89
DDR1-256ENST00000505066 VPS37DQ86XT2 251 aa20.64■□□□□ 0.89
DDR1-256ENST00000505066 RNF186Q9NXI6 227 aa20.64■□□□□ 0.89
DDR1-256ENST00000505066 UBE2Q2LH0YL09 131 aa20.63■□□□□ 0.89
DDR1-256ENST00000505066 FOXO4P98177 505 aa20.63■□□□□ 0.89
DDR1-256ENST00000505066 SREBF2Q12772 1141 aa20.63■□□□□ 0.89
DDR1-256ENST00000505066 C15orf52Q6ZUT6 534 aaKnown RBP20.63■□□□□ 0.89
DDR1-256ENST00000505066 RASAL3Q86YV0 1011 aa20.63■□□□□ 0.89
DDR1-256ENST00000505066 PPP1R12BO60237 982 aaPredicted RBP20.62■□□□□ 0.89
DDR1-256ENST00000505066 FRAT2O75474 233 aaPredicted RBP20.62■□□□□ 0.89
DDR1-256ENST00000505066 SUPT20HL1Q3ZLR7 823 aa20.62■□□□□ 0.89
DDR1-256ENST00000505066 CSRNP1Q96S65 589 aa20.62■□□□□ 0.89
DDR1-256ENST00000505066 ZIC5Q96T25 663 aa20.62■□□□□ 0.89
DDR1-256ENST00000505066 PPP2R3BQ9Y5P8 575 aa20.62■□□□□ 0.89
DDR1-256ENST00000505066 E9PSI1 815 aa20.61■□□□□ 0.89
DDR1-256ENST00000505066 F8W031 263 aaPredicted RBP20.61■□□□□ 0.89
DDR1-256ENST00000505066 MLLT1Q03111 559 aaPredicted RBP20.61■□□□□ 0.89
DDR1-256ENST00000505066 PRAMEF18Q5VWM3 479 aa20.61■□□□□ 0.89
DDR1-256ENST00000505066 KLRK1P26718 216 aa20.6■□□□□ 0.89
DDR1-256ENST00000505066 FKBP1AP62942 108 aaKnown RBP20.6■□□□□ 0.89
DDR1-256ENST00000505066 PRKG1Q13976 671 aa20.6■□□□□ 0.89
DDR1-256ENST00000505066 MROH5Q6ZUA9 1318 aa20.59■□□□□ 0.89
DDR1-256ENST00000505066 IL1R1P14778 569 aa20.59■□□□□ 0.89
DDR1-256ENST00000505066 TNFAIP1Q13829 316 aa20.59■□□□□ 0.89
DDR1-256ENST00000505066 UBE4AQ14139 1066 aa20.59■□□□□ 0.89
DDR1-256ENST00000505066 CAVIN4Q5BKX8 364 aa20.59■□□□□ 0.89
DDR1-256ENST00000505066 SLC10A4Q96EP9 437 aa20.59■□□□□ 0.89
DDR1-256ENST00000505066 DEFB129Q9H1M3 183 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 185.7 ms