RNA–Protein interactions for RNA: ENST00000504974.1

RFC1-209, Transcript of replication factor C subunit 1, humanhuman

TSL 5

Gene RFC1, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-209ENST00000504974 PDE12Q6L8Q7 609 aaKnown RBP5.48□□□□□ -1.53
RFC1-209ENST00000504974 TXNDC11Q6PKC3 985 aa5.48□□□□□ -1.53
RFC1-209ENST00000504974 NPAS4Q8IUM7 802 aa5.48□□□□□ -1.53
RFC1-209ENST00000504974 LACRTQ9GZZ8 138 aa5.48□□□□□ -1.53
RFC1-209ENST00000504974 EFCC1Q9HA90 598 aa5.48□□□□□ -1.53
RFC1-209ENST00000504974 CNTN3Q9P232 1028 aa5.48□□□□□ -1.53
RFC1-209ENST00000504974 KANSL3Q9P2N6 904 aa5.48□□□□□ -1.53
RFC1-209ENST00000504974 FOXD3Q9UJU5 478 aaPredicted RBP5.48□□□□□ -1.53
RFC1-209ENST00000504974 PHACTR2O75167 634 aa5.47□□□□□ -1.53
RFC1-209ENST00000504974 TNFRSF21O75509 655 aa5.47□□□□□ -1.53
RFC1-209ENST00000504974 ALX3O95076 343 aa5.47□□□□□ -1.53
RFC1-209ENST00000504974 ELNP15502 786 aa5.47□□□□□ -1.53
RFC1-209ENST00000504974 NRG1Q02297 640 aaPredicted RBP5.47□□□□□ -1.53
RFC1-209ENST00000504974 MBTPS1Q14703 1052 aa5.47□□□□□ -1.53
RFC1-209ENST00000504974 EAPPQ56P03 285 aaPredicted RBP5.47□□□□□ -1.53
RFC1-209ENST00000504974 WFDC8Q8IUA0 241 aa5.47□□□□□ -1.53
RFC1-209ENST00000504974 IL22RA1Q8N6P7 574 aa5.47□□□□□ -1.53
RFC1-209ENST00000504974 GIPC2Q8TF65 315 aa5.47□□□□□ -1.53
RFC1-209ENST00000504974 ABI2Q9NYB9 513 aaPredicted RBP5.47□□□□□ -1.53
RFC1-209ENST00000504974 USP21Q9UK80 565 aa5.47□□□□□ -1.53
RFC1-209ENST00000504974 PNMA6FA0A0J9YX94 578 aa5.46□□□□□ -1.54
RFC1-209ENST00000504974 NEFLP07196 543 aa5.46□□□□□ -1.54
RFC1-209ENST00000504974 RBM25P49756 843 aaKnown RBP5.46□□□□□ -1.54
RFC1-209ENST00000504974 RAC1P63000 192 aa5.46□□□□□ -1.54
RFC1-209ENST00000504974 NKAPLQ5M9Q1 402 aa5.46□□□□□ -1.54
RFC1-209ENST00000504974 SNX29Q8TEQ0 813 aa5.46□□□□□ -1.54
RFC1-209ENST00000504974 ZNF428Q96B54 188 aa5.46□□□□□ -1.54
RFC1-209ENST00000504974 RASSF4Q9H2L5 321 aa5.46□□□□□ -1.54
RFC1-209ENST00000504974 FRRS1LQ9P0K9 344 aa5.46□□□□□ -1.54
RFC1-209ENST00000504974 EIF1AYO14602 144 aaKnown RBP5.45□□□□□ -1.54
RFC1-209ENST00000504974 GHRHP01286 108 aa5.45□□□□□ -1.54
RFC1-209ENST00000504974 IGHA2P01877 340 aa5.45□□□□□ -1.54
RFC1-209ENST00000504974 POLR3DP05423 398 aaPredicted RBP5.45□□□□□ -1.54
RFC1-209ENST00000504974 LDHBP07195 334 aaKnown RBP5.45□□□□□ -1.54
RFC1-209ENST00000504974 CES1P23141 567 aa5.45□□□□□ -1.54
RFC1-209ENST00000504974 IREB2P48200 963 aaKnown RBP5.45□□□□□ -1.54
RFC1-209ENST00000504974 ATP2B2Q01814 1243 aa5.45□□□□□ -1.54
RFC1-209ENST00000504974 TAGLNQ01995 201 aaKnown RBP5.45□□□□□ -1.54
RFC1-209ENST00000504974 ADGRE1Q14246 886 aa5.45□□□□□ -1.54
RFC1-209ENST00000504974 DSC3Q14574 896 aa5.45□□□□□ -1.54
RFC1-209ENST00000504974 FOXD4L6Q3SYB3 417 aaPredicted RBP5.45□□□□□ -1.54
RFC1-209ENST00000504974 FOXD4L3Q6VB84 417 aaPredicted RBP5.45□□□□□ -1.54
RFC1-209ENST00000504974 C1orf127Q8N9H9 656 aa5.45□□□□□ -1.54
RFC1-209ENST00000504974 OR13H1Q8NG92 308 aa5.45□□□□□ -1.54
RFC1-209ENST00000504974 ALKBH8Q96BT7 664 aaKnown RBP5.45□□□□□ -1.54
RFC1-209ENST00000504974 HHIPQ96QV1 700 aa5.45□□□□□ -1.54
RFC1-209ENST00000504974 SETDB2Q96T68 719 aa5.45□□□□□ -1.54
RFC1-209ENST00000504974 SH2B1Q9NRF2 756 aaPredicted RBP5.45□□□□□ -1.54
RFC1-209ENST00000504974 LINC01387J3KSC0 135 aa5.44□□□□□ -1.54
RFC1-209ENST00000504974 EREGO14944 169 aa5.44□□□□□ -1.54
RFC1-209ENST00000504974 CPNE3O75131 537 aaKnown RBP5.44□□□□□ -1.54
RFC1-209ENST00000504974 NOS3P29474 1203 aa5.44□□□□□ -1.54
RFC1-209ENST00000504974 FMR1Q06787 632 aaKnown RBP eCLIP5.44□□□□□ -1.54
RFC1-209ENST00000504974 PCSK7Q16549 785 aa5.44□□□□□ -1.54
RFC1-209ENST00000504974 ZNF326Q5BKZ1 582 aaKnown RBP5.44□□□□□ -1.54
RFC1-209ENST00000504974 USPL1Q5W0Q7 1092 aa5.44□□□□□ -1.54
RFC1-209ENST00000504974 CEP135Q66GS9 1140 aa5.44□□□□□ -1.54
RFC1-209ENST00000504974 XKR5Q6UX68 686 aa5.44□□□□□ -1.54
RFC1-209ENST00000504974 FBXO11Q86XK2 927 aa5.44□□□□□ -1.54
RFC1-209ENST00000504974 AGGF1Q8N302 714 aaeCLIP5.44□□□□□ -1.54
RFC1-209ENST00000504974 LENG1Q96BZ8 264 aaPredicted RBP5.44□□□□□ -1.54
RFC1-209ENST00000504974 CSRNP1Q96S65 589 aa5.44□□□□□ -1.54
RFC1-209ENST00000504974 CARD10Q9BWT7 1032 aa5.44□□□□□ -1.54
RFC1-209ENST00000504974 C11orf16Q9NQ32 467 aa5.44□□□□□ -1.54
RFC1-209ENST00000504974 WWC3Q9ULE0 1092 aa5.44□□□□□ -1.54
RFC1-209ENST00000504974 C9orf172C9J069 976 aa5.43□□□□□ -1.54
RFC1-209ENST00000504974 DDX3YO15523 660 aaKnown RBP5.43□□□□□ -1.54
RFC1-209ENST00000504974 SETDB1Q15047 1291 aa5.43□□□□□ -1.54
RFC1-209ENST00000504974 ENOX2Q16206 610 aaKnown RBP5.43□□□□□ -1.54
RFC1-209ENST00000504974 NCAPG2Q86XI2 1143 aa5.43□□□□□ -1.54
RFC1-209ENST00000504974 GALNT11Q8NCW6 608 aa5.43□□□□□ -1.54
RFC1-209ENST00000504974 WFDC12Q8WWY7 111 aa5.43□□□□□ -1.54
RFC1-209ENST00000504974 TTC9Q92623 222 aa5.43□□□□□ -1.54
RFC1-209ENST00000504974 TP53INP1Q96A56 240 aa5.43□□□□□ -1.54
RFC1-209ENST00000504974 POP1Q99575 1024 aaKnown RBP5.43□□□□□ -1.54
RFC1-209ENST00000504974 ZFYVE28Q9HCC9 887 aa5.43□□□□□ -1.54
RFC1-209ENST00000504974 KCNK4Q9NYG8 393 aa5.43□□□□□ -1.54
RFC1-209ENST00000504974 AMOTL2Q9Y2J4 779 aa5.43□□□□□ -1.54
RFC1-209ENST00000504974 DLL1O00548 723 aa5.42□□□□□ -1.54
RFC1-209ENST00000504974 DYRK3O43781 588 aa5.42□□□□□ -1.54
RFC1-209ENST00000504974 SOX18P35713 384 aa5.42□□□□□ -1.54
RFC1-209ENST00000504974 HYAL2Q12891 473 aa5.42□□□□□ -1.54
RFC1-209ENST00000504974 HGSNATQ68CP4 663 aa5.42□□□□□ -1.54
RFC1-209ENST00000504974 FBXO33Q7Z6M2 555 aa5.42□□□□□ -1.54
RFC1-209ENST00000504974 TXNRD3Q86VQ6 643 aa5.42□□□□□ -1.54
RFC1-209ENST00000504974 MEGF10Q96KG7 1140 aa5.42□□□□□ -1.54
RFC1-209ENST00000504974 NACC1Q96RE7 527 aa5.42□□□□□ -1.54
RFC1-209ENST00000504974 CHRDQ9H2X0 955 aa5.42□□□□□ -1.54
RFC1-209ENST00000504974 GADD45BO75293 160 aaPredicted RBP5.41□□□□□ -1.54
RFC1-209ENST00000504974 WISP1O95388 367 aa5.41□□□□□ -1.54
RFC1-209ENST00000504974 ZNF16P17020 682 aaPredicted RBP5.41□□□□□ -1.54
RFC1-209ENST00000504974 XPCQ01831 940 aaPredicted RBP5.41□□□□□ -1.54
RFC1-209ENST00000504974 COL19A1Q14993 1142 aa5.41□□□□□ -1.54
RFC1-209ENST00000504974 PRSS36Q5K4E3 855 aa5.41□□□□□ -1.54
RFC1-209ENST00000504974 XP32Q5T750 250 aa5.41□□□□□ -1.54
RFC1-209ENST00000504974 ALG1LQ6GMV1 187 aa5.41□□□□□ -1.54
RFC1-209ENST00000504974 NPM2Q86SE8 214 aaKnown RBP5.41□□□□□ -1.54
RFC1-209ENST00000504974 CEP120Q8N960 986 aa5.41□□□□□ -1.54
RFC1-209ENST00000504974 EPS8L3Q8TE67 593 aaKnown RBP5.41□□□□□ -1.54
RFC1-209ENST00000504974 PMEPA1Q969W9 287 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms