RNA–Protein interactions for RNA: ENST00000504701.5

CDC42SE2-207, Transcript of CDC42 small effector 2, humanhuman

TSL 4

Gene CDC42SE2, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-207ENST00000504701 USP17L4A6NCW7 530 aa28.79■■■□□ 2.2
CDC42SE2-207ENST00000504701 CHRNDQ07001 517 aa28.79■■■□□ 2.2
CDC42SE2-207ENST00000504701 USP17L1Q7RTZ2 530 aa28.79■■■□□ 2.2
CDC42SE2-207ENST00000504701 PODNQ7Z5L7 613 aa28.79■■■□□ 2.2
CDC42SE2-207ENST00000504701 HELBQ8NG08 1087 aaPredicted RBP28.79■■■□□ 2.2
CDC42SE2-207ENST00000504701 ZNF804BA4D1E1 1349 aa28.78■■■□□ 2.2
CDC42SE2-207ENST00000504701 ANKRD18BA2A2Z9 1011 aa28.78■■■□□ 2.2
CDC42SE2-207ENST00000504701 GRM8O00222 908 aa28.78■■■□□ 2.2
CDC42SE2-207ENST00000504701 TAF5LO75529 589 aa28.78■■■□□ 2.2
CDC42SE2-207ENST00000504701 ZNF280AP59817 542 aaPredicted RBP28.78■■■□□ 2.2
CDC42SE2-207ENST00000504701 LMBR1LQ6UX01 489 aa28.78■■■□□ 2.2
CDC42SE2-207ENST00000504701 FBXW7Q969H0 707 aa28.78■■■□□ 2.2
CDC42SE2-207ENST00000504701 ZNF594Q96JF6 807 aaPredicted RBP28.78■■■□□ 2.2
CDC42SE2-207ENST00000504701 SCAF8Q9UPN6 1271 aaKnown RBP28.78■■■□□ 2.2
CDC42SE2-207ENST00000504701 MRPL50Q8N5N7 158 aaKnown RBP28.77■■■□□ 2.2
CDC42SE2-207ENST00000504701 AGBL3Q8NEM8 1001 aa28.77■■■□□ 2.2
CDC42SE2-207ENST00000504701 CDCA7LQ96GN5 454 aa28.77■■■□□ 2.2
CDC42SE2-207ENST00000504701 LEMD3Q9Y2U8 911 aa28.77■■■□□ 2.2
CDC42SE2-207ENST00000504701 CAPN15O75808 1086 aa28.76■■■□□ 2.19
CDC42SE2-207ENST00000504701 DACT2Q5SW24 774 aa28.76■■■□□ 2.19
CDC42SE2-207ENST00000504701 AIDAQ96BJ3 306 aa28.76■■■□□ 2.19
CDC42SE2-207ENST00000504701 DCPSQ96C86 337 aaKnown RBP28.75■■■□□ 2.19
CDC42SE2-207ENST00000504701 IRS2Q9Y4H2 1338 aa28.74■■■□□ 2.19
CDC42SE2-207ENST00000504701 LBX1P52954 281 aa28.74■■■□□ 2.19
CDC42SE2-207ENST00000504701 IFIT5Q13325 482 aaKnown RBP28.74■■■□□ 2.19
CDC42SE2-207ENST00000504701 SCARF1Q14162 830 aa28.74■■■□□ 2.19
CDC42SE2-207ENST00000504701 KAZALD1Q96I82 304 aa28.74■■■□□ 2.19
CDC42SE2-207ENST00000504701 SUCLG2Q96I99 432 aa28.74■■■□□ 2.19
CDC42SE2-207ENST00000504701 SRCIN1Q9C0H9 1055 aa28.74■■■□□ 2.19
CDC42SE2-207ENST00000504701 ANKRD2Q9GZV1 360 aa28.74■■■□□ 2.19
CDC42SE2-207ENST00000504701 MYOZ2Q9NPC6 264 aa28.74■■■□□ 2.19
CDC42SE2-207ENST00000504701 USP17L8P0C7I0 530 aa28.73■■■□□ 2.19
CDC42SE2-207ENST00000504701 HSPA8P11142 646 aaKnown RBP28.73■■■□□ 2.19
CDC42SE2-207ENST00000504701 ECE1P42892 770 aa28.73■■■□□ 2.19
CDC42SE2-207ENST00000504701 CTCFP49711 727 aaPredicted RBP28.73■■■□□ 2.19
CDC42SE2-207ENST00000504701 SLFN5Q08AF3 891 aa28.73■■■□□ 2.19
CDC42SE2-207ENST00000504701 ANGEL2Q5VTE6 544 aaKnown RBP28.73■■■□□ 2.19
CDC42SE2-207ENST00000504701 COA1Q9GZY4 146 aa28.73■■■□□ 2.19
CDC42SE2-207ENST00000504701 C9orf78Q9NZ63 289 aaPredicted RBP28.73■■■□□ 2.19
CDC42SE2-207ENST00000504701 E9PSI1 815 aa28.72■■■□□ 2.19
CDC42SE2-207ENST00000504701 ALDH1L1O75891 902 aa28.72■■■□□ 2.19
CDC42SE2-207ENST00000504701 NBPF7P0C2Y1 421 aaPredicted RBP28.72■■■□□ 2.19
CDC42SE2-207ENST00000504701 SSH1Q8WYL5 1049 aa28.72■■■□□ 2.19
CDC42SE2-207ENST00000504701 ZIC5Q96T25 663 aa28.72■■■□□ 2.19
CDC42SE2-207ENST00000504701 KCNJ4P48050 445 aa28.71■■■□□ 2.19
CDC42SE2-207ENST00000504701 HUNKP57058 714 aa28.7■■■□□ 2.18
CDC42SE2-207ENST00000504701 MAP2K1Q02750 393 aaPredicted RBP28.7■■■□□ 2.18
CDC42SE2-207ENST00000504701 TSKSQ9UJT2 592 aa28.7■■■□□ 2.18
CDC42SE2-207ENST00000504701 NBPF9Q3BBW0 867 aa28.69■■■□□ 2.18
CDC42SE2-207ENST00000504701 SULF1Q8IWU6 871 aa28.69■■■□□ 2.18
CDC42SE2-207ENST00000504701 CDCA5Q96FF9 252 aa28.69■■■□□ 2.18
CDC42SE2-207ENST00000504701 GBA2Q9HCG7 927 aaPredicted RBP28.69■■■□□ 2.18
CDC42SE2-207ENST00000504701 PLIN1O60240 522 aa28.68■■■□□ 2.18
CDC42SE2-207ENST00000504701 GTF2IP78347 998 aa28.68■■■□□ 2.18
CDC42SE2-207ENST00000504701 STRIP1Q5VSL9 837 aa28.68■■■□□ 2.18
CDC42SE2-207ENST00000504701 PRDM10Q9NQV6 1147 aa28.68■■■□□ 2.18
CDC42SE2-207ENST00000504701 CCDC57Q2TAC2 916 aa28.67■■■□□ 2.18
CDC42SE2-207ENST00000504701 TTLL5Q6EMB2 1281 aa28.67■■■□□ 2.18
CDC42SE2-207ENST00000504701 HHIPL1Q96JK4 782 aa28.67■■■□□ 2.18
CDC42SE2-207ENST00000504701 PUS3Q9BZE2 481 aaKnown RBP28.67■■■□□ 2.18
CDC42SE2-207ENST00000504701 CD209Q9NNX6 404 aa28.67■■■□□ 2.18
CDC42SE2-207ENST00000504701 TAF7LQ5H9L4 462 aa28.66■■■□□ 2.18
CDC42SE2-207ENST00000504701 PRAMEF18Q5VWM3 479 aa28.66■■■□□ 2.18
CDC42SE2-207ENST00000504701 SASH1O94885 1247 aa28.65■■■□□ 2.18
CDC42SE2-207ENST00000504701 LDHAL6AQ6ZMR3 332 aa28.65■■■□□ 2.18
CDC42SE2-207ENST00000504701 KIAA0825Q8IV33 1275 aa28.65■■■□□ 2.18
CDC42SE2-207ENST00000504701 JAG2Q9Y219 1238 aa28.65■■■□□ 2.18
CDC42SE2-207ENST00000504701 UTYO14607 1347 aa28.65■■■□□ 2.18
CDC42SE2-207ENST00000504701 CERS5Q8N5B7 392 aa28.64■■■□□ 2.18
CDC42SE2-207ENST00000504701 BICC1Q9H694 974 aaKnown RBP28.64■■■□□ 2.18
CDC42SE2-207ENST00000504701 CNNM1Q9NRU3 951 aa28.64■■■□□ 2.18
CDC42SE2-207ENST00000504701 WNT10BO00744 389 aa28.63■■■□□ 2.17
CDC42SE2-207ENST00000504701 MAP2K2P36507 400 aa28.63■■■□□ 2.17
CDC42SE2-207ENST00000504701 ANKRD44Q8N8A2 993 aa28.63■■■□□ 2.17
CDC42SE2-207ENST00000504701 C2orf69Q8N8R5 385 aa28.63■■■□□ 2.17
CDC42SE2-207ENST00000504701 FAM155AB1AL88 458 aaPredicted RBP28.62■■■□□ 2.17
CDC42SE2-207ENST00000504701 C15orf52Q6ZUT6 534 aaKnown RBP28.62■■■□□ 2.17
CDC42SE2-207ENST00000504701 MOB2Q70IA6 237 aa28.62■■■□□ 2.17
CDC42SE2-207ENST00000504701 TRMT2AQ8IZ69 625 aaKnown RBP28.62■■■□□ 2.17
CDC42SE2-207ENST00000504701 PCDHAC2Q9Y5I4 1007 aa28.62■■■□□ 2.17
CDC42SE2-207ENST00000504701 RGMBQ6NW40 437 aa28.61■■■□□ 2.17
CDC42SE2-207ENST00000504701 PTPRCP08575 1304 aa28.61■■■□□ 2.17
CDC42SE2-207ENST00000504701 MYO3BQ8WXR4 1341 aa28.61■■■□□ 2.17
CDC42SE2-207ENST00000504701 PITPNM2Q9BZ72 1349 aa28.6■■■□□ 2.17
CDC42SE2-207ENST00000504701 OGFOD1Q8N543 542 aa28.59■■■□□ 2.17
CDC42SE2-207ENST00000504701 PAPPA2Q9BXP8 1791 aa28.58■■■□□ 2.17
CDC42SE2-207ENST00000504701 IL1R1P14778 569 aa28.58■■■□□ 2.17
CDC42SE2-207ENST00000504701 RABL6Q3YEC7 729 aaPredicted RBP28.58■■■□□ 2.17
CDC42SE2-207ENST00000504701 KLHDC4Q8TBB5 520 aa28.58■■■□□ 2.17
CDC42SE2-207ENST00000504701 BEGAINQ9BUH8 593 aa28.58■■■□□ 2.17
CDC42SE2-207ENST00000504701 USP44Q9H0E7 712 aa28.58■■■□□ 2.17
CDC42SE2-207ENST00000504701 SMC4Q9NTJ3 1288 aa28.58■■■□□ 2.17
CDC42SE2-207ENST00000504701 F8W031 263 aaPredicted RBP28.57■■■□□ 2.16
CDC42SE2-207ENST00000504701 CCER2I3L3R5 266 aa28.57■■■□□ 2.16
CDC42SE2-207ENST00000504701 ZNF157P51786 506 aaPredicted RBP28.57■■■□□ 2.16
CDC42SE2-207ENST00000504701 BRPF1P55201 1214 aaPredicted RBP28.57■■■□□ 2.16
CDC42SE2-207ENST00000504701 LRRC24Q50LG9 513 aa28.57■■■□□ 2.16
CDC42SE2-207ENST00000504701 ZNF804AQ7Z570 1209 aa28.57■■■□□ 2.16
CDC42SE2-207ENST00000504701 ZBED3Q96IU2 234 aaPredicted RBP28.57■■■□□ 2.16
CDC42SE2-207ENST00000504701 GYG1P46976 350 aa28.56■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms