RNA–Protein interactions for RNA: ENST00000504526.1

TRAPPC11-203, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-203ENST00000504526 MROH5Q6ZUA9 1318 aa26.54■■□□□ 1.84
TRAPPC11-203ENST00000504526 TRIM27P14373 513 aa26.53■■□□□ 1.84
TRAPPC11-203ENST00000504526 DNAJC5GQ8N7S2 189 aa26.53■■□□□ 1.84
TRAPPC11-203ENST00000504526 CREBZFQ9NS37 354 aa26.53■■□□□ 1.84
TRAPPC11-203ENST00000504526 PGAP2Q9UHJ9 254 aa26.53■■□□□ 1.84
TRAPPC11-203ENST00000504526 RIPOR2Q9Y4F9 1068 aa26.52■■□□□ 1.84
TRAPPC11-203ENST00000504526 PSME4Q14997 1843 aa26.51■■□□□ 1.83
TRAPPC11-203ENST00000504526 MYO3BQ8WXR4 1341 aa26.51■■□□□ 1.83
TRAPPC11-203ENST00000504526 PLIN1O60240 522 aa26.51■■□□□ 1.83
TRAPPC11-203ENST00000504526 GNAI3P08754 354 aa26.51■■□□□ 1.83
TRAPPC11-203ENST00000504526 KLRK1P26718 216 aa26.51■■□□□ 1.83
TRAPPC11-203ENST00000504526 HTRA3P83110 453 aa26.51■■□□□ 1.83
TRAPPC11-203ENST00000504526 UBE4AQ14139 1066 aa26.51■■□□□ 1.83
TRAPPC11-203ENST00000504526 STRIP1Q5VSL9 837 aa26.51■■□□□ 1.83
TRAPPC11-203ENST00000504526 ZKSCAN2Q63HK3 967 aa26.51■■□□□ 1.83
TRAPPC11-203ENST00000504526 PUS3Q9BZE2 481 aaKnown RBP26.51■■□□□ 1.83
TRAPPC11-203ENST00000504526 A0A1B0GUL6 1792 aa26.51■■□□□ 1.83
TRAPPC11-203ENST00000504526 IRS2Q9Y4H2 1338 aa26.5■■□□□ 1.83
TRAPPC11-203ENST00000504526 ZNF804AQ7Z570 1209 aa26.5■■□□□ 1.83
TRAPPC11-203ENST00000504526 TRPM4Q8TD43 1214 aa26.5■■□□□ 1.83
TRAPPC11-203ENST00000504526 SHTN1A0MZ66 631 aa26.49■■□□□ 1.83
TRAPPC11-203ENST00000504526 HIRAP54198 1017 aaPredicted RBP26.49■■□□□ 1.83
TRAPPC11-203ENST00000504526 KLRG1Q96E93 195 aa26.49■■□□□ 1.83
TRAPPC11-203ENST00000504526 GMLQ99445 158 aa26.49■■□□□ 1.83
TRAPPC11-203ENST00000504526 CD209Q9NNX6 404 aa26.49■■□□□ 1.83
TRAPPC11-203ENST00000504526 TMEM88BA6NKF7 163 aa26.48■■□□□ 1.83
TRAPPC11-203ENST00000504526 SNAP23O00161 211 aa26.48■■□□□ 1.83
TRAPPC11-203ENST00000504526 ZNF280AP59817 542 aaPredicted RBP26.48■■□□□ 1.83
TRAPPC11-203ENST00000504526 DACT2Q5SW24 774 aa26.48■■□□□ 1.83
TRAPPC11-203ENST00000504526 SAMD7Q7Z3H4 446 aa26.48■■□□□ 1.83
TRAPPC11-203ENST00000504526 MEIS3Q99687 375 aa26.48■■□□□ 1.83
TRAPPC11-203ENST00000504526 CEP350Q5VT06 3117 aa26.47■■□□□ 1.83
TRAPPC11-203ENST00000504526 USP17L8P0C7I0 530 aa26.47■■□□□ 1.83
TRAPPC11-203ENST00000504526 MMP14P50281 582 aa26.47■■□□□ 1.83
TRAPPC11-203ENST00000504526 TBC1D10BQ4KMP7 808 aaPredicted RBP26.47■■□□□ 1.83
TRAPPC11-203ENST00000504526 METTL24Q5JXM2 366 aa26.47■■□□□ 1.83
TRAPPC11-203ENST00000504526 TTLL5Q6EMB2 1281 aa26.47■■□□□ 1.83
TRAPPC11-203ENST00000504526 FBXO3Q9UK99 471 aa26.47■■□□□ 1.83
TRAPPC11-203ENST00000504526 LRRFIP2Q9Y608 721 aaKnown RBP26.47■■□□□ 1.83
TRAPPC11-203ENST00000504526 RFX5P48382 616 aaPredicted RBP26.46■■□□□ 1.83
TRAPPC11-203ENST00000504526 KIF4BQ2VIQ3 1234 aa26.46■■□□□ 1.83
TRAPPC11-203ENST00000504526 LRRC24Q50LG9 513 aa26.46■■□□□ 1.83
TRAPPC11-203ENST00000504526 FBXW7Q969H0 707 aa26.46■■□□□ 1.83
TRAPPC11-203ENST00000504526 CLUAP1Q96AJ1 413 aa26.46■■□□□ 1.83
TRAPPC11-203ENST00000504526 IL1R1P14778 569 aa26.45■■□□□ 1.82
TRAPPC11-203ENST00000504526 CDC37L1Q7L3B6 337 aa26.45■■□□□ 1.82
TRAPPC11-203ENST00000504526 KLHDC4Q8TBB5 520 aa26.45■■□□□ 1.82
TRAPPC11-203ENST00000504526 EYA2O00167 538 aa26.44■■□□□ 1.82
TRAPPC11-203ENST00000504526 GTF2IP78347 998 aa26.44■■□□□ 1.82
TRAPPC11-203ENST00000504526 PTPN12Q05209 780 aaKnown RBP26.44■■□□□ 1.82
TRAPPC11-203ENST00000504526 RBM26Q5T8P6 1007 aaKnown RBP26.44■■□□□ 1.82
TRAPPC11-203ENST00000504526 OGFOD1Q8N543 542 aa26.44■■□□□ 1.82
TRAPPC11-203ENST00000504526 PDE8BO95263 885 aa26.43■■□□□ 1.82
TRAPPC11-203ENST00000504526 EGFRP00533 1210 aa26.42■■□□□ 1.82
TRAPPC11-203ENST00000504526 VGLL2Q8N8G2 317 aa26.42■■□□□ 1.82
TRAPPC11-203ENST00000504526 TNNQ9UQP3 1299 aa26.42■■□□□ 1.82
TRAPPC11-203ENST00000504526 CIAO1O76071 339 aa26.41■■□□□ 1.82
TRAPPC11-203ENST00000504526 HIBADHP31937 336 aaKnown RBP26.41■■□□□ 1.82
TRAPPC11-203ENST00000504526 FTSJ3Q8IY81 847 aaKnown RBP26.41■■□□□ 1.82
TRAPPC11-203ENST00000504526 DCPSQ96C86 337 aaKnown RBP26.41■■□□□ 1.82
TRAPPC11-203ENST00000504526 MYOZ2Q9NPC6 264 aa26.41■■□□□ 1.82
TRAPPC11-203ENST00000504526 FKBP1AP62942 108 aaKnown RBP26.4■■□□□ 1.82
TRAPPC11-203ENST00000504526 MTX1Q13505 466 aa26.4■■□□□ 1.82
TRAPPC11-203ENST00000504526 DZIP1LQ8IYY4 767 aaKnown RBP26.4■■□□□ 1.82
TRAPPC11-203ENST00000504526 TMEM57Q8N5G2 664 aa26.4■■□□□ 1.82
TRAPPC11-203ENST00000504526 JMYQ8N9B5 988 aa26.4■■□□□ 1.82
TRAPPC11-203ENST00000504526 GLIS2Q9BZE0 524 aaPredicted RBP26.4■■□□□ 1.82
TRAPPC11-203ENST00000504526 HDAC9Q9UKV0 1011 aa26.4■■□□□ 1.82
TRAPPC11-203ENST00000504526 TRAF5O00463 557 aa26.39■■□□□ 1.82
TRAPPC11-203ENST00000504526 SASH1O94885 1247 aa26.39■■□□□ 1.82
TRAPPC11-203ENST00000504526 GNAI2P04899 355 aa26.39■■□□□ 1.82
TRAPPC11-203ENST00000504526 PUM3Q15397 648 aaKnown RBP26.39■■□□□ 1.82
TRAPPC11-203ENST00000504526 CAVIN4Q5BKX8 364 aa26.39■■□□□ 1.82
TRAPPC11-203ENST00000504526 FAM84BQ96KN1 310 aaPredicted RBP26.39■■□□□ 1.82
TRAPPC11-203ENST00000504526 MXD3Q9BW11 206 aa26.39■■□□□ 1.82
TRAPPC11-203ENST00000504526 ZNF646O15015 1829 aaPredicted RBP26.39■■□□□ 1.81
TRAPPC11-203ENST00000504526 IFIT1P09914 478 aaKnown RBP26.38■■□□□ 1.81
TRAPPC11-203ENST00000504526 GYG1P46976 350 aa26.38■■□□□ 1.81
TRAPPC11-203ENST00000504526 TDRD7Q8NHU6 1098 aaKnown RBP26.38■■□□□ 1.81
TRAPPC11-203ENST00000504526 COPRSQ9NQ92 184 aa26.38■■□□□ 1.81
TRAPPC11-203ENST00000504526 ATG9AQ7Z3C6 839 aa26.37■■□□□ 1.81
TRAPPC11-203ENST00000504526 KRT26Q7Z3Y9 468 aa26.37■■□□□ 1.81
TRAPPC11-203ENST00000504526 VPS37DQ86XT2 251 aa26.37■■□□□ 1.81
TRAPPC11-203ENST00000504526 GGA3Q9NZ52 723 aa26.37■■□□□ 1.81
TRAPPC11-203ENST00000504526 FAM205AQ6ZU69 1335 aa26.37■■□□□ 1.81
TRAPPC11-203ENST00000504526 CNTNAP1P78357 1384 aa26.36■■□□□ 1.81
TRAPPC11-203ENST00000504526 IL15P40933 162 aaPredicted RBP26.36■■□□□ 1.81
TRAPPC11-203ENST00000504526 SCARF1Q14162 830 aa26.36■■□□□ 1.81
TRAPPC11-203ENST00000504526 FBXO33Q7Z6M2 555 aa26.36■■□□□ 1.81
TRAPPC11-203ENST00000504526 USP48Q86UV5 1035 aa26.36■■□□□ 1.81
TRAPPC11-203ENST00000504526 KIAA0825Q8IV33 1275 aa26.36■■□□□ 1.81
TRAPPC11-203ENST00000504526 SIL1Q9H173 461 aa26.36■■□□□ 1.81
TRAPPC11-203ENST00000504526 SRGAP3O43295 1099 aa26.35■■□□□ 1.81
TRAPPC11-203ENST00000504526 MS4A1P11836 297 aa26.35■■□□□ 1.81
TRAPPC11-203ENST00000504526 FGFR2P21802 821 aa26.35■■□□□ 1.81
TRAPPC11-203ENST00000504526 FMR1Q06787 632 aaKnown RBP eCLIP26.35■■□□□ 1.81
TRAPPC11-203ENST00000504526 CST9Q5W186 159 aa26.35■■□□□ 1.81
TRAPPC11-203ENST00000504526 SULF1Q8IWU6 871 aa26.35■■□□□ 1.81
TRAPPC11-203ENST00000504526 LPIN2Q92539 896 aa26.35■■□□□ 1.81
TRAPPC11-203ENST00000504526 CEP126Q9P2H0 1117 aa26.35■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms