RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 UFL1O94874 794 aa14.79□□□□□ -0.04
PDLIM5-208ENST00000504489 ATG9AQ7Z3C6 839 aa14.79□□□□□ -0.04
PDLIM5-208ENST00000504489 EYA3Q99504 573 aa14.79□□□□□ -0.04
PDLIM5-208ENST00000504489 RNF181Q9P0P0 153 aa14.79□□□□□ -0.04
PDLIM5-208ENST00000504489 COL4A5P29400 1685 aa14.78□□□□□ -0.04
PDLIM5-208ENST00000504489 ZNF804BA4D1E1 1349 aa14.78□□□□□ -0.04
PDLIM5-208ENST00000504489 ZC3H4Q9UPT8 1303 aaKnown RBP14.78□□□□□ -0.04
PDLIM5-208ENST00000504489 HMMRO75330 724 aa14.78□□□□□ -0.04
PDLIM5-208ENST00000504489 TAF5LO75529 589 aa14.78□□□□□ -0.04
PDLIM5-208ENST00000504489 IL15P40933 162 aaPredicted RBP14.78□□□□□ -0.04
PDLIM5-208ENST00000504489 KIAA2012Q0VF49 1180 aa14.78□□□□□ -0.04
PDLIM5-208ENST00000504489 METTL24Q5JXM2 366 aa14.78□□□□□ -0.04
PDLIM5-208ENST00000504489 SIRT2Q8IXJ6 389 aa14.78□□□□□ -0.04
PDLIM5-208ENST00000504489 HELBQ8NG08 1087 aaPredicted RBP14.78□□□□□ -0.04
PDLIM5-208ENST00000504489 SIL1Q9H173 461 aa14.78□□□□□ -0.04
PDLIM5-208ENST00000504489 NOP58Q9Y2X3 529 aaKnown RBP14.78□□□□□ -0.04
PDLIM5-208ENST00000504489 PPIP5K2O43314 1243 aa14.77□□□□□ -0.05
PDLIM5-208ENST00000504489 PDE8BO95263 885 aa14.77□□□□□ -0.05
PDLIM5-208ENST00000504489 UBE4AQ14139 1066 aa14.77□□□□□ -0.05
PDLIM5-208ENST00000504489 AOC3Q16853 763 aa14.77□□□□□ -0.05
PDLIM5-208ENST00000504489 WASHC4Q2M389 1173 aa14.77□□□□□ -0.05
PDLIM5-208ENST00000504489 VGLL2Q8N8G2 317 aa14.77□□□□□ -0.05
PDLIM5-208ENST00000504489 ZC3H12CQ9C0D7 883 aaKnown RBP14.77□□□□□ -0.05
PDLIM5-208ENST00000504489 MED23Q9ULK4 1368 aa14.76□□□□□ -0.05
PDLIM5-208ENST00000504489 WTIPA6NIX2 430 aaPredicted RBP14.76□□□□□ -0.05
PDLIM5-208ENST00000504489 KCNJ4P48050 445 aa14.76□□□□□ -0.05
PDLIM5-208ENST00000504489 G3BP1Q13283 466 aaKnown RBP eCLIP14.76□□□□□ -0.05
PDLIM5-208ENST00000504489 C15orf52Q6ZUT6 534 aaKnown RBP14.76□□□□□ -0.05
PDLIM5-208ENST00000504489 LARGE2Q8N3Y3 721 aa14.76□□□□□ -0.05
PDLIM5-208ENST00000504489 CEP126Q9P2H0 1117 aa14.76□□□□□ -0.05
PDLIM5-208ENST00000504489 IRS2Q9Y4H2 1338 aa14.75□□□□□ -0.05
PDLIM5-208ENST00000504489 RIMBP2O15034 1052 aa14.75□□□□□ -0.05
PDLIM5-208ENST00000504489 SURF6O75683 361 aaKnown RBP14.75□□□□□ -0.05
PDLIM5-208ENST00000504489 EXOC6Q8TAG9 804 aa14.75□□□□□ -0.05
PDLIM5-208ENST00000504489 JDP2Q8WYK2 163 aa14.75□□□□□ -0.05
PDLIM5-208ENST00000504489 PCDHB15Q9Y5E8 787 aa14.75□□□□□ -0.05
PDLIM5-208ENST00000504489 SCN4AP35499 1836 aa14.75□□□□□ -0.05
PDLIM5-208ENST00000504489 FZD9O00144 591 aa14.74□□□□□ -0.05
PDLIM5-208ENST00000504489 SNAP23O00161 211 aa14.74□□□□□ -0.05
PDLIM5-208ENST00000504489 MNX1P50219 401 aaPredicted RBP14.74□□□□□ -0.05
PDLIM5-208ENST00000504489 NIM1KQ8IY84 436 aa14.74□□□□□ -0.05
PDLIM5-208ENST00000504489 GPR101Q96P66 508 aaPredicted RBP14.74□□□□□ -0.05
PDLIM5-208ENST00000504489 GABBR2O75899 941 aa14.73□□□□□ -0.05
PDLIM5-208ENST00000504489 SASH1O94885 1247 aa14.73□□□□□ -0.05
PDLIM5-208ENST00000504489 FGFR2P21802 821 aa14.73□□□□□ -0.05
PDLIM5-208ENST00000504489 PUM3Q15397 648 aaKnown RBP14.73□□□□□ -0.05
PDLIM5-208ENST00000504489 HSP90AB4PQ58FF6 505 aa14.73□□□□□ -0.05
PDLIM5-208ENST00000504489 TXNRD3Q86VQ6 643 aa14.73□□□□□ -0.05
PDLIM5-208ENST00000504489 ZNRF3Q9ULT6 936 aa14.73□□□□□ -0.05
PDLIM5-208ENST00000504489 AKAP11Q9UKA4 1901 aa14.72□□□□□ -0.05
PDLIM5-208ENST00000504489 WDR90Q96KV7 1748 aa14.72□□□□□ -0.05
PDLIM5-208ENST00000504489 KLRK1P26718 216 aa14.72□□□□□ -0.05
PDLIM5-208ENST00000504489 IRX6P78412 446 aaPredicted RBP14.72□□□□□ -0.05
PDLIM5-208ENST00000504489 TFCP2Q12800 502 aa14.72□□□□□ -0.05
PDLIM5-208ENST00000504489 OS9Q13438 667 aaPredicted RBP14.72□□□□□ -0.05
PDLIM5-208ENST00000504489 LPIN2Q92539 896 aa14.72□□□□□ -0.05
PDLIM5-208ENST00000504489 AKAP2Q9Y2D5 859 aa14.72□□□□□ -0.05
PDLIM5-208ENST00000504489 G3V3G9 751 aa14.71□□□□□ -0.05
PDLIM5-208ENST00000504489 ECE2O60344 883 aa14.71□□□□□ -0.05
PDLIM5-208ENST00000504489 IFIT1P09914 478 aaKnown RBP14.71□□□□□ -0.05
PDLIM5-208ENST00000504489 SLC5A1P13866 664 aa14.71□□□□□ -0.05
PDLIM5-208ENST00000504489 ATP2B3Q16720 1220 aa14.71□□□□□ -0.05
PDLIM5-208ENST00000504489 DOK7Q18PE1 504 aa14.71□□□□□ -0.05
PDLIM5-208ENST00000504489 DCAF8Q5TAQ9 597 aa14.71□□□□□ -0.05
PDLIM5-208ENST00000504489 PODNQ7Z5L7 613 aa14.71□□□□□ -0.05
PDLIM5-208ENST00000504489 ERC1Q8IUD2 1116 aa14.71□□□□□ -0.05
PDLIM5-208ENST00000504489 COA1Q9GZY4 146 aa14.71□□□□□ -0.05
PDLIM5-208ENST00000504489 DBNDD1Q9H9R9 158 aa14.71□□□□□ -0.05
PDLIM5-208ENST00000504489 GPR108Q9NPR9 543 aa14.71□□□□□ -0.05
PDLIM5-208ENST00000504489 EXOC6BQ9Y2D4 811 aa14.71□□□□□ -0.05
PDLIM5-208ENST00000504489 MYO5AQ9Y4I1 1855 aaKnown RBP14.7□□□□□ -0.06
PDLIM5-208ENST00000504489 YDJCA8MPS7 323 aa14.7□□□□□ -0.06
PDLIM5-208ENST00000504489 RAB11FIP3O75154 756 aa14.7□□□□□ -0.06
PDLIM5-208ENST00000504489 YY1P25490 414 aa14.7□□□□□ -0.06
PDLIM5-208ENST00000504489 EIF6P56537 245 aaKnown RBP14.7□□□□□ -0.06
PDLIM5-208ENST00000504489 DPY19L2Q6NUT2 758 aa14.7□□□□□ -0.06
PDLIM5-208ENST00000504489 ZNF804AQ7Z570 1209 aa14.7□□□□□ -0.06
PDLIM5-208ENST00000504489 FAM84BQ96KN1 310 aaPredicted RBP14.7□□□□□ -0.06
PDLIM5-208ENST00000504489 DCTPP1Q9H773 170 aa14.7□□□□□ -0.06
PDLIM5-208ENST00000504489 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.7□□□□□ -0.06
PDLIM5-208ENST00000504489 POLR2AP24928 1970 aaKnown RBP14.7□□□□□ -0.06
PDLIM5-208ENST00000504489 ZNF609O15014 1411 aa14.69□□□□□ -0.06
PDLIM5-208ENST00000504489 GLTPD2A6NH11 291 aa14.69□□□□□ -0.06
PDLIM5-208ENST00000504489 CXCL9Q07325 125 aa14.69□□□□□ -0.06
PDLIM5-208ENST00000504489 HDAC1Q13547 482 aaPredicted RBP14.69□□□□□ -0.06
PDLIM5-208ENST00000504489 FBXO33Q7Z6M2 555 aa14.69□□□□□ -0.06
PDLIM5-208ENST00000504489 CD209Q9NNX6 404 aa14.69□□□□□ -0.06
PDLIM5-208ENST00000504489 ZNF541Q9H0D2 1346 aa14.68□□□□□ -0.06
PDLIM5-208ENST00000504489 A0A1B0GUL7 405 aa14.68□□□□□ -0.06
PDLIM5-208ENST00000504489 IL1R1P14778 569 aa14.68□□□□□ -0.06
PDLIM5-208ENST00000504489 HIBADHP31937 336 aaKnown RBP14.68□□□□□ -0.06
PDLIM5-208ENST00000504489 GYG1P46976 350 aa14.68□□□□□ -0.06
PDLIM5-208ENST00000504489 TIMM10P62072 90 aa14.68□□□□□ -0.06
PDLIM5-208ENST00000504489 TNIP1Q15025 636 aa14.68□□□□□ -0.06
PDLIM5-208ENST00000504489 CAVIN4Q5BKX8 364 aa14.68□□□□□ -0.06
PDLIM5-208ENST00000504489 CIAPIN1Q6FI81 312 aa14.68□□□□□ -0.06
PDLIM5-208ENST00000504489 KIF1BPQ96EK5 621 aa14.68□□□□□ -0.06
PDLIM5-208ENST00000504489 KDM2BQ8NHM5 1336 aa14.67□□□□□ -0.06
PDLIM5-208ENST00000504489 RAD17O75943 681 aa14.67□□□□□ -0.06
PDLIM5-208ENST00000504489 GPC2Q8N158 579 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms