RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 PARD3BQ8TEW8 1205 aa4.29□□□□□ -1.72
PCDH11X-208ENST00000504220 USP33Q8TEY7 942 aa4.29□□□□□ -1.72
PCDH11X-208ENST00000504220 KIAA1522Q9P206 1035 aaPredicted RBP4.29□□□□□ -1.72
PCDH11X-208ENST00000504220 GPRASP1Q5JY77 1395 aa4.29□□□□□ -1.72
PCDH11X-208ENST00000504220 CDK12Q9NYV4 1490 aaPredicted RBP4.29□□□□□ -1.72
PCDH11X-208ENST00000504220 SGSM2O43147 1006 aa4.29□□□□□ -1.72
PCDH11X-208ENST00000504220 SMARCA1P28370 1054 aa4.29□□□□□ -1.72
PCDH11X-208ENST00000504220 EXOSC9Q06265 439 aaKnown RBP4.29□□□□□ -1.72
PCDH11X-208ENST00000504220 PLPP6Q8IY26 295 aa4.29□□□□□ -1.72
PCDH11X-208ENST00000504220 ANKIB1Q9P2G1 1089 aa4.29□□□□□ -1.72
PCDH11X-208ENST00000504220 ATP6V1DQ9Y5K8 247 aa4.29□□□□□ -1.72
PCDH11X-208ENST00000504220 MAP4K4O95819 1239 aaPredicted RBP4.28□□□□□ -1.72
PCDH11X-208ENST00000504220 TEFQ10587 303 aa4.28□□□□□ -1.72
PCDH11X-208ENST00000504220 C10orf67Q8IYJ2 551 aa4.28□□□□□ -1.72
PCDH11X-208ENST00000504220 SMARCE1Q969G3 411 aa4.28□□□□□ -1.72
PCDH11X-208ENST00000504220 NEUROD6Q96NK8 337 aa4.28□□□□□ -1.72
PCDH11X-208ENST00000504220 C19orf44Q9H6X5 657 aa4.28□□□□□ -1.72
PCDH11X-208ENST00000504220 ATP7BP35670 1465 aa4.28□□□□□ -1.72
PCDH11X-208ENST00000504220 RALGAPBQ86X10 1494 aa4.28□□□□□ -1.72
PCDH11X-208ENST00000504220 CCDC7Q96M83 1385 aa4.28□□□□□ -1.72
PCDH11X-208ENST00000504220 EIF3FO00303 357 aaPredicted RBP4.28□□□□□ -1.72
PCDH11X-208ENST00000504220 IFIT2P09913 472 aaKnown RBP4.28□□□□□ -1.72
PCDH11X-208ENST00000504220 FBLN1P23142 703 aa4.28□□□□□ -1.72
PCDH11X-208ENST00000504220 NUCB2P80303 420 aa4.28□□□□□ -1.72
PCDH11X-208ENST00000504220 TSR1Q2NL82 804 aaKnown RBP4.28□□□□□ -1.72
PCDH11X-208ENST00000504220 MCTP2Q6DN12 878 aa4.28□□□□□ -1.72
PCDH11X-208ENST00000504220 ZNF662Q6ZS27 426 aa4.28□□□□□ -1.72
PCDH11X-208ENST00000504220 C3orf20Q8ND61 904 aa4.28□□□□□ -1.72
PCDH11X-208ENST00000504220 LMO7Q8WWI1 1683 aa4.28□□□□□ -1.72
PCDH11X-208ENST00000504220 IBSPP21815 317 aaPredicted RBP4.28□□□□□ -1.72
PCDH11X-208ENST00000504220 HSPA1LP34931 641 aa4.28□□□□□ -1.72
PCDH11X-208ENST00000504220 NLRP6P59044 892 aa4.28□□□□□ -1.72
PCDH11X-208ENST00000504220 STK3Q13188 491 aa4.28□□□□□ -1.72
PCDH11X-208ENST00000504220 CWC27Q6UX04 472 aaKnown RBP4.28□□□□□ -1.72
PCDH11X-208ENST00000504220 NEK11Q8NG66 645 aa4.28□□□□□ -1.72
PCDH11X-208ENST00000504220 NACC2Q96BF6 587 aa4.28□□□□□ -1.72
PCDH11X-208ENST00000504220 CCDC34Q96HJ3 373 aa4.28□□□□□ -1.72
PCDH11X-208ENST00000504220 PUF60Q9UHX1 559 aaKnown RBP4.28□□□□□ -1.72
PCDH11X-208ENST00000504220 N6AMT1Q9Y5N5 214 aa4.28□□□□□ -1.72
PCDH11X-208ENST00000504220 EIF3AQ14152 1382 aaKnown RBP4.27□□□□□ -1.73
PCDH11X-208ENST00000504220 MAP3K13O43283 966 aa4.27□□□□□ -1.73
PCDH11X-208ENST00000504220 DIAPH1O60610 1272 aaKnown RBP4.27□□□□□ -1.73
PCDH11X-208ENST00000504220 H2AFXP16104 143 aaPredicted RBP4.27□□□□□ -1.73
PCDH11X-208ENST00000504220 CYP11B2P19099 503 aa4.27□□□□□ -1.73
PCDH11X-208ENST00000504220 ICA1Q05084 483 aa4.27□□□□□ -1.73
PCDH11X-208ENST00000504220 IQCF2Q8IXL9 164 aa4.27□□□□□ -1.73
PCDH11X-208ENST00000504220 ABTB2Q8N961 1025 aa4.27□□□□□ -1.73
PCDH11X-208ENST00000504220 SNX21Q969T3 373 aa4.27□□□□□ -1.73
PCDH11X-208ENST00000504220 NUDT16Q96DE0 195 aaKnown RBP4.27□□□□□ -1.73
PCDH11X-208ENST00000504220 TBC1D32Q96NH3 1257 aa4.27□□□□□ -1.73
PCDH11X-208ENST00000504220 COL14A1Q05707 1796 aaKnown RBP4.27□□□□□ -1.73
PCDH11X-208ENST00000504220 JCADQ9P266 1359 aa4.27□□□□□ -1.73
PCDH11X-208ENST00000504220 ADAMTS2O95450 1211 aa4.27□□□□□ -1.73
PCDH11X-208ENST00000504220 EIF4BP23588 611 aaKnown RBP4.27□□□□□ -1.73
PCDH11X-208ENST00000504220 NAP1L1P55209 391 aaKnown RBP4.27□□□□□ -1.73
PCDH11X-208ENST00000504220 ZNF362Q5T0B9 420 aaPredicted RBP4.27□□□□□ -1.73
PCDH11X-208ENST00000504220 WLSQ5T9L3 541 aa4.27□□□□□ -1.73
PCDH11X-208ENST00000504220 PACS1Q6VY07 963 aa4.27□□□□□ -1.73
PCDH11X-208ENST00000504220 FILIP1Q7Z7B0 1213 aa4.27□□□□□ -1.73
PCDH11X-208ENST00000504220 TMEM151BQ8IW70 566 aa4.27□□□□□ -1.73
PCDH11X-208ENST00000504220 KCTD17Q8N5Z5 321 aa4.27□□□□□ -1.73
PCDH11X-208ENST00000504220 BAG1Q99933 345 aaPredicted RBP4.27□□□□□ -1.73
PCDH11X-208ENST00000504220 CENPOQ9BU64 300 aa4.27□□□□□ -1.73
PCDH11X-208ENST00000504220 ZNF510Q9Y2H8 683 aa4.27□□□□□ -1.73
PCDH11X-208ENST00000504220 SPO11Q9Y5K1 396 aa4.27□□□□□ -1.73
PCDH11X-208ENST00000504220 ABCC6O95255 1503 aa4.27□□□□□ -1.73
PCDH11X-208ENST00000504220 SOS2Q07890 1332 aaPredicted RBP4.27□□□□□ -1.73
PCDH11X-208ENST00000504220 TMEM221A6NGB7 291 aa4.27□□□□□ -1.73
PCDH11X-208ENST00000504220 FYB1O15117 783 aa4.27□□□□□ -1.73
PCDH11X-208ENST00000504220 RPS6KA5O75582 802 aa4.27□□□□□ -1.73
PCDH11X-208ENST00000504220 SURF6O75683 361 aaKnown RBP4.27□□□□□ -1.73
PCDH11X-208ENST00000504220 MAGEA9P43362 315 aa4.27□□□□□ -1.73
PCDH11X-208ENST00000504220 ZC3H6P61129 1189 aaKnown RBP4.27□□□□□ -1.73
PCDH11X-208ENST00000504220 AKAP17AQ02040 695 aaKnown RBP4.27□□□□□ -1.73
PCDH11X-208ENST00000504220 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.27□□□□□ -1.73
PCDH11X-208ENST00000504220 MEX3CQ5U5Q3 659 aaKnown RBP4.27□□□□□ -1.73
PCDH11X-208ENST00000504220 INTS3Q68E01 1043 aaKnown RBP4.27□□□□□ -1.73
PCDH11X-208ENST00000504220 FERMT3Q86UX7 667 aa4.27□□□□□ -1.73
PCDH11X-208ENST00000504220 MYLK4Q86YV6 388 aaPredicted RBP4.27□□□□□ -1.73
PCDH11X-208ENST00000504220 TTC30BQ8N4P2 665 aa4.27□□□□□ -1.73
PCDH11X-208ENST00000504220 MYOM1P52179 1685 aa4.27□□□□□ -1.73
PCDH11X-208ENST00000504220 PNPLA6Q8IY17 1366 aa4.26□□□□□ -1.73
PCDH11X-208ENST00000504220 SPATA31A6Q5VVP1 1343 aa4.26□□□□□ -1.73
PCDH11X-208ENST00000504220 A0A1B0GVG6 124 aa4.26□□□□□ -1.73
PCDH11X-208ENST00000504220 CYP2E1P05181 493 aaPredicted RBP4.26□□□□□ -1.73
PCDH11X-208ENST00000504220 RPL13P26373 211 aaKnown RBP4.26□□□□□ -1.73
PCDH11X-208ENST00000504220 MRPL12P52815 198 aaKnown RBP4.26□□□□□ -1.73
PCDH11X-208ENST00000504220 NSUN2Q08J23 767 aaKnown RBP eCLIP4.26□□□□□ -1.73
PCDH11X-208ENST00000504220 CCDC73Q6ZRK6 1079 aa4.26□□□□□ -1.73
PCDH11X-208ENST00000504220 GIMAP1Q8WWP7 306 aa4.26□□□□□ -1.73
PCDH11X-208ENST00000504220 SYTL4Q96C24 671 aaPredicted RBP4.26□□□□□ -1.73
PCDH11X-208ENST00000504220 COG3Q96JB2 828 aa4.26□□□□□ -1.73
PCDH11X-208ENST00000504220 AGBL1Q96MI9 1066 aa4.26□□□□□ -1.73
PCDH11X-208ENST00000504220 ORAI2Q96SN7 254 aa4.26□□□□□ -1.73
PCDH11X-208ENST00000504220 SLAIN2Q9P270 581 aa4.26□□□□□ -1.73
PCDH11X-208ENST00000504220 NSFL1CQ9UNZ2 370 aaKnown RBP4.26□□□□□ -1.73
PCDH11X-208ENST00000504220 PLEKHH1Q9ULM0 1364 aa4.26□□□□□ -1.73
PCDH11X-208ENST00000504220 COL18A1P39060 1754 aa4.26□□□□□ -1.73
PCDH11X-208ENST00000504220 PIK3C2AO00443 1686 aa4.26□□□□□ -1.73
PCDH11X-208ENST00000504220 SPDYE3A6NKU9 549 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms