RNA–Protein interactions for RNA: ENST00000504073.1

SGCA-204, Transcript of sarcoglycan alpha, humanhuman

TSL 5

Gene SGCA, Length 696 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-204ENST00000504073 GRIN3BO60391 1043 aa18.32■□□□□ 0.52
SGCA-204ENST00000504073 FGFR2P21802 821 aa18.32■□□□□ 0.52
SGCA-204ENST00000504073 ATP2B4P23634 1241 aa18.32■□□□□ 0.52
SGCA-204ENST00000504073 CC2D2BQ6DHV5 1058 aa18.32■□□□□ 0.52
SGCA-204ENST00000504073 HELBQ8NG08 1087 aaPredicted RBP18.32■□□□□ 0.52
SGCA-204ENST00000504073 ZNF512BQ96KM6 892 aaPredicted RBP18.32■□□□□ 0.52
SGCA-204ENST00000504073 TAF5LO75529 589 aa18.31■□□□□ 0.52
SGCA-204ENST00000504073 SDSP20132 328 aa18.31■□□□□ 0.52
SGCA-204ENST00000504073 TLR7Q9NYK1 1049 aaKnown RBP18.31■□□□□ 0.52
SGCA-204ENST00000504073 ATP6V0A2Q9Y487 856 aa18.31■□□□□ 0.52
SGCA-204ENST00000504073 ZNF804BA4D1E1 1349 aa18.3■□□□□ 0.52
SGCA-204ENST00000504073 GSPT1P15170 499 aaKnown RBP18.3■□□□□ 0.52
SGCA-204ENST00000504073 TGFB2P61812 414 aa18.3■□□□□ 0.52
SGCA-204ENST00000504073 TSHZ3Q63HK5 1081 aa18.3■□□□□ 0.52
SGCA-204ENST00000504073 RUFY2Q8WXA3 655 aa18.3■□□□□ 0.52
SGCA-204ENST00000504073 BACH2Q9BYV9 841 aa18.3■□□□□ 0.52
SGCA-204ENST00000504073 BOLA2Q9H3K6 86 aa18.3■□□□□ 0.52
SGCA-204ENST00000504073 GGA1Q9UJY5 639 aa18.3■□□□□ 0.52
SGCA-204ENST00000504073 AK9Q5TCS8 1911 aa18.29■□□□□ 0.52
SGCA-204ENST00000504073 ARAP2Q8WZ64 1704 aa18.29■□□□□ 0.52
SGCA-204ENST00000504073 TTF1Q15361 905 aaPredicted RBP18.29■□□□□ 0.52
SGCA-204ENST00000504073 HAUS7Q99871 368 aa18.29■□□□□ 0.52
SGCA-204ENST00000504073 NSFL1CQ9UNZ2 370 aaKnown RBP18.29■□□□□ 0.52
SGCA-204ENST00000504073 TAF1P21675 1872 aa18.29■□□□□ 0.52
SGCA-204ENST00000504073 SEMA3EO15041 775 aa18.28■□□□□ 0.52
SGCA-204ENST00000504073 SOGA3Q5TF21 947 aa18.28■□□□□ 0.52
SGCA-204ENST00000504073 DNAJC2Q99543 621 aaKnown RBP18.28■□□□□ 0.52
SGCA-204ENST00000504073 PODXL2Q9NZ53 605 aa18.28■□□□□ 0.52
SGCA-204ENST00000504073 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.28■□□□□ 0.52
SGCA-204ENST00000504073 FRAT2O75474 233 aaPredicted RBP18.27■□□□□ 0.52
SGCA-204ENST00000504073 ADORA1P30542 326 aa18.27■□□□□ 0.52
SGCA-204ENST00000504073 C8orf34Q49A92 452 aa18.27■□□□□ 0.52
SGCA-204ENST00000504073 CCDC102BQ68D86 513 aa18.27■□□□□ 0.52
SGCA-204ENST00000504073 ZNF804AQ7Z570 1209 aa18.27■□□□□ 0.52
SGCA-204ENST00000504073 TTLL6Q8N841 843 aa18.27■□□□□ 0.52
SGCA-204ENST00000504073 EYA3Q99504 573 aa18.27■□□□□ 0.52
SGCA-204ENST00000504073 FSD1Q9BTV5 496 aa18.27■□□□□ 0.52
SGCA-204ENST00000504073 DIAPH3Q9NSV4 1193 aa18.27■□□□□ 0.52
SGCA-204ENST00000504073 CD2APQ9Y5K6 639 aa18.27■□□□□ 0.52
SGCA-204ENST00000504073 RFX7Q2KHR2 1363 aa18.27■□□□□ 0.51
SGCA-204ENST00000504073 UFL1O94874 794 aa18.26■□□□□ 0.51
SGCA-204ENST00000504073 ARID4AP29374 1257 aaPredicted RBP18.26■□□□□ 0.51
SGCA-204ENST00000504073 ZSCAN25Q6NSZ9 544 aa18.26■□□□□ 0.51
SGCA-204ENST00000504073 MPNDQ8N594 471 aa18.26■□□□□ 0.51
SGCA-204ENST00000504073 SUPT20HQ8NEM7 779 aa18.26■□□□□ 0.51
SGCA-204ENST00000504073 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.26■□□□□ 0.51
SGCA-204ENST00000504073 PAG1Q9NWQ8 432 aa18.26■□□□□ 0.51
SGCA-204ENST00000504073 A0A1B0GUL6 1792 aa18.26■□□□□ 0.51
SGCA-204ENST00000504073 COL11A2P13942 1736 aaPredicted RBP18.26■□□□□ 0.51
SGCA-204ENST00000504073 CAPN15O75808 1086 aa18.25■□□□□ 0.51
SGCA-204ENST00000504073 REC8O95072 547 aa18.25■□□□□ 0.51
SGCA-204ENST00000504073 HIBADHP31937 336 aaKnown RBP18.25■□□□□ 0.51
SGCA-204ENST00000504073 FKBP4Q02790 459 aaKnown RBP eCLIP18.25■□□□□ 0.51
SGCA-204ENST00000504073 PRPF40BQ6NWY9 871 aaKnown RBP18.25■□□□□ 0.51
SGCA-204ENST00000504073 DPP8Q6V1X1 898 aaPredicted RBP18.25■□□□□ 0.51
SGCA-204ENST00000504073 C15orf52Q6ZUT6 534 aaKnown RBP18.25■□□□□ 0.51
SGCA-204ENST00000504073 DENND2AQ9ULE3 1009 aa18.25■□□□□ 0.51
SGCA-204ENST00000504073 LRRC37AA6NMS7 1700 aa18.24■□□□□ 0.51
SGCA-204ENST00000504073 KIF13BQ9NQT8 1826 aa18.24■□□□□ 0.51
SGCA-204ENST00000504073 C6orf229H3BNL8 230 aa18.24■□□□□ 0.51
SGCA-204ENST00000504073 CHRNA5P30532 468 aa18.24■□□□□ 0.51
SGCA-204ENST00000504073 GPSM2P81274 684 aa18.24■□□□□ 0.51
SGCA-204ENST00000504073 TBC1D9Q6ZT07 1266 aa18.24■□□□□ 0.51
SGCA-204ENST00000504073 PIM2Q9P1W9 311 aa18.24■□□□□ 0.51
SGCA-204ENST00000504073 G3V3G9 751 aa18.23■□□□□ 0.51
SGCA-204ENST00000504073 ZBTB22O15209 634 aa18.23■□□□□ 0.51
SGCA-204ENST00000504073 IGSF3O75054 1194 aa18.23■□□□□ 0.51
SGCA-204ENST00000504073 MAP4K4O95819 1239 aaPredicted RBP18.23■□□□□ 0.51
SGCA-204ENST00000504073 ZFYP08048 801 aaPredicted RBP18.23■□□□□ 0.51
SGCA-204ENST00000504073 PHKA1P46020 1223 aa18.23■□□□□ 0.51
SGCA-204ENST00000504073 DCAF8Q5TAQ9 597 aa18.23■□□□□ 0.51
SGCA-204ENST00000504073 KBTBD3Q8NAB2 608 aa18.23■□□□□ 0.51
SGCA-204ENST00000504073 DLEC1Q9Y238 1755 aa18.22■□□□□ 0.51
SGCA-204ENST00000504073 MED23Q9ULK4 1368 aa18.22■□□□□ 0.51
SGCA-204ENST00000504073 GOLIM4O00461 696 aa18.22■□□□□ 0.51
SGCA-204ENST00000504073 WASHC4Q2M389 1173 aa18.22■□□□□ 0.51
SGCA-204ENST00000504073 ZGPATQ8N5A5 531 aaKnown RBP18.22■□□□□ 0.51
SGCA-204ENST00000504073 SPATA5Q8NB90 893 aa18.22■□□□□ 0.51
SGCA-204ENST00000504073 ZC3H12CQ9C0D7 883 aaKnown RBP18.22■□□□□ 0.51
SGCA-204ENST00000504073 PDS5AQ29RF7 1337 aaKnown RBP18.22■□□□□ 0.51
SGCA-204ENST00000504073 DPEP1P16444 411 aa18.21■□□□□ 0.51
SGCA-204ENST00000504073 CHMLP26374 656 aa18.21■□□□□ 0.51
SGCA-204ENST00000504073 BCAMP50895 628 aa18.21■□□□□ 0.51
SGCA-204ENST00000504073 MFAP1P55081 439 aaKnown RBP18.21■□□□□ 0.51
SGCA-204ENST00000504073 CCDC93Q567U6 631 aa18.21■□□□□ 0.51
SGCA-204ENST00000504073 KIAA1211Q6ZU35 1233 aa18.21■□□□□ 0.51
SGCA-204ENST00000504073 FBXO33Q7Z6M2 555 aa18.21■□□□□ 0.51
SGCA-204ENST00000504073 RTKN2Q8IZC4 609 aa18.21■□□□□ 0.51
SGCA-204ENST00000504073 TBC1D16Q8TBP0 767 aa18.21■□□□□ 0.51
SGCA-204ENST00000504073 FAM84BQ96KN1 310 aaPredicted RBP18.21■□□□□ 0.51
SGCA-204ENST00000504073 RAD50Q92878 1312 aa18.21■□□□□ 0.51
SGCA-204ENST00000504073 CACNA1SQ13698 1873 aa18.2■□□□□ 0.5
SGCA-204ENST00000504073 COL4A1P02462 1669 aa18.2■□□□□ 0.5
SGCA-204ENST00000504073 GYG1P46976 350 aa18.2■□□□□ 0.5
SGCA-204ENST00000504073 MAP3K12Q12852 859 aa18.2■□□□□ 0.5
SGCA-204ENST00000504073 DALRD3Q5D0E6 543 aaKnown RBP18.2■□□□□ 0.5
SGCA-204ENST00000504073 TMED8Q6PL24 325 aaPredicted RBP18.2■□□□□ 0.5
SGCA-204ENST00000504073 DNAJC5GQ8N7S2 189 aa18.2■□□□□ 0.5
SGCA-204ENST00000504073 KIF3CO14782 793 aa18.19■□□□□ 0.5
SGCA-204ENST00000504073 EPB41L2O43491 1005 aaKnown RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms