RNA–Protein interactions for RNA: ENST00000504044.1

NFKB1-204, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2

Gene NFKB1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-204ENST00000504044 UBE4AQ14139 1066 aa22.42■■□□□ 1.18
NFKB1-204ENST00000504044 ATF7IPQ6VMQ6 1270 aa22.42■■□□□ 1.18
NFKB1-204ENST00000504044 OGFOD1Q8N543 542 aa22.42■■□□□ 1.18
NFKB1-204ENST00000504044 HELBQ8NG08 1087 aaPredicted RBP22.42■■□□□ 1.18
NFKB1-204ENST00000504044 KCNQ5Q9NR82 932 aa22.42■■□□□ 1.18
NFKB1-204ENST00000504044 USP17L8P0C7I0 530 aa22.41■■□□□ 1.18
NFKB1-204ENST00000504044 ZKSCAN2Q63HK3 967 aa22.41■■□□□ 1.18
NFKB1-204ENST00000504044 INTS3Q68E01 1043 aaKnown RBP22.41■■□□□ 1.18
NFKB1-204ENST00000504044 CDC37L1Q7L3B6 337 aa22.41■■□□□ 1.18
NFKB1-204ENST00000504044 ANKRD44Q8N8A2 993 aa22.41■■□□□ 1.18
NFKB1-204ENST00000504044 HTRA3P83110 453 aa22.4■■□□□ 1.18
NFKB1-204ENST00000504044 KIF4BQ2VIQ3 1234 aa22.4■■□□□ 1.18
NFKB1-204ENST00000504044 METTL24Q5JXM2 366 aa22.4■■□□□ 1.18
NFKB1-204ENST00000504044 TTLL5Q6EMB2 1281 aa22.4■■□□□ 1.18
NFKB1-204ENST00000504044 DNAJC5GQ8N7S2 189 aa22.4■■□□□ 1.18
NFKB1-204ENST00000504044 PGAP2Q9UHJ9 254 aa22.4■■□□□ 1.18
NFKB1-204ENST00000504044 ADAMTSL1Q8N6G6 1762 aa22.4■■□□□ 1.18
NFKB1-204ENST00000504044 TBC1D10BQ4KMP7 808 aaPredicted RBP22.39■■□□□ 1.17
NFKB1-204ENST00000504044 RBM26Q5T8P6 1007 aaKnown RBP22.39■■□□□ 1.17
NFKB1-204ENST00000504044 TRPM4Q8TD43 1214 aa22.39■■□□□ 1.17
NFKB1-204ENST00000504044 DCPSQ96C86 337 aaKnown RBP22.39■■□□□ 1.17
NFKB1-204ENST00000504044 CD209Q9NNX6 404 aa22.39■■□□□ 1.17
NFKB1-204ENST00000504044 HDAC9Q9UKV0 1011 aa22.39■■□□□ 1.17
NFKB1-204ENST00000504044 BCAR3O75815 825 aa22.38■■□□□ 1.17
NFKB1-204ENST00000504044 TRIM27P14373 513 aa22.38■■□□□ 1.17
NFKB1-204ENST00000504044 SAMD7Q7Z3H4 446 aa22.38■■□□□ 1.17
NFKB1-204ENST00000504044 TXNRD3Q86VQ6 643 aa22.38■■□□□ 1.17
NFKB1-204ENST00000504044 FBXO3Q9UK99 471 aa22.38■■□□□ 1.17
NFKB1-204ENST00000504044 SPEF2Q9C093 1822 aa22.38■■□□□ 1.17
NFKB1-204ENST00000504044 ZNF280AP59817 542 aaPredicted RBP22.37■■□□□ 1.17
NFKB1-204ENST00000504044 DACT2Q5SW24 774 aa22.37■■□□□ 1.17
NFKB1-204ENST00000504044 VPS37DQ86XT2 251 aa22.37■■□□□ 1.17
NFKB1-204ENST00000504044 FTSJ3Q8IY81 847 aaKnown RBP22.37■■□□□ 1.17
NFKB1-204ENST00000504044 RIPOR2Q9Y4F9 1068 aa22.37■■□□□ 1.17
NFKB1-204ENST00000504044 WTIPA6NIX2 430 aaPredicted RBP22.36■■□□□ 1.17
NFKB1-204ENST00000504044 KLRK1P26718 216 aa22.36■■□□□ 1.17
NFKB1-204ENST00000504044 HIRAP54198 1017 aaPredicted RBP22.36■■□□□ 1.17
NFKB1-204ENST00000504044 GTF2IP78347 998 aa22.36■■□□□ 1.17
NFKB1-204ENST00000504044 CAVIN4Q5BKX8 364 aa22.36■■□□□ 1.17
NFKB1-204ENST00000504044 PUS3Q9BZE2 481 aaKnown RBP22.36■■□□□ 1.17
NFKB1-204ENST00000504044 ABT1Q9ULW3 272 aaKnown RBP22.36■■□□□ 1.17
NFKB1-204ENST00000504044 SULF1Q8IWU6 871 aa22.35■■□□□ 1.17
NFKB1-204ENST00000504044 GMLQ99445 158 aa22.35■■□□□ 1.17
NFKB1-204ENST00000504044 MYOZ2Q9NPC6 264 aa22.35■■□□□ 1.17
NFKB1-204ENST00000504044 LRRFIP2Q9Y608 721 aaKnown RBP22.35■■□□□ 1.17
NFKB1-204ENST00000504044 SHTN1A0MZ66 631 aa22.34■■□□□ 1.17
NFKB1-204ENST00000504044 PDE8BO95263 885 aa22.34■■□□□ 1.17
NFKB1-204ENST00000504044 IFIT1P09914 478 aaKnown RBP22.34■■□□□ 1.17
NFKB1-204ENST00000504044 IL1R1P14778 569 aa22.34■■□□□ 1.17
NFKB1-204ENST00000504044 HIBADHP31937 336 aaKnown RBP22.34■■□□□ 1.17
NFKB1-204ENST00000504044 CLUAP1Q96AJ1 413 aa22.34■■□□□ 1.17
NFKB1-204ENST00000504044 MEIS3Q99687 375 aa22.34■■□□□ 1.17
NFKB1-204ENST00000504044 EYA2O00167 538 aa22.33■■□□□ 1.17
NFKB1-204ENST00000504044 FKBP1AP62942 108 aaKnown RBP22.33■■□□□ 1.17
NFKB1-204ENST00000504044 LRRC24Q50LG9 513 aa22.33■■□□□ 1.17
NFKB1-204ENST00000504044 KRT26Q7Z3Y9 468 aa22.33■■□□□ 1.17
NFKB1-204ENST00000504044 JMYQ8N9B5 988 aa22.33■■□□□ 1.17
NFKB1-204ENST00000504044 GLIS2Q9BZE0 524 aaPredicted RBP22.33■■□□□ 1.17
NFKB1-204ENST00000504044 SNAP23O00161 211 aa22.32■■□□□ 1.16
NFKB1-204ENST00000504044 FRAT2O75474 233 aaPredicted RBP22.32■■□□□ 1.16
NFKB1-204ENST00000504044 CIAO1O76071 339 aa22.32■■□□□ 1.16
NFKB1-204ENST00000504044 CELF2O95319 508 aaKnown RBP22.32■■□□□ 1.16
NFKB1-204ENST00000504044 MS4A1P11836 297 aa22.32■■□□□ 1.16
NFKB1-204ENST00000504044 PUM3Q15397 648 aaKnown RBP22.32■■□□□ 1.16
NFKB1-204ENST00000504044 MKRN1Q9UHC7 482 aaKnown RBP22.32■■□□□ 1.16
NFKB1-204ENST00000504044 IRS2Q9Y4H2 1338 aa22.31■■□□□ 1.16
NFKB1-204ENST00000504044 CNTNAP1P78357 1384 aa22.31■■□□□ 1.16
NFKB1-204ENST00000504044 TRAF5O00463 557 aa22.31■■□□□ 1.16
NFKB1-204ENST00000504044 SASH1O94885 1247 aa22.31■■□□□ 1.16
NFKB1-204ENST00000504044 GNAI2P04899 355 aa22.31■■□□□ 1.16
NFKB1-204ENST00000504044 DEFB115Q30KQ5 88 aa22.31■■□□□ 1.16
NFKB1-204ENST00000504044 GGA3Q9NZ52 723 aa22.31■■□□□ 1.16
NFKB1-204ENST00000504044 SLC5A1P13866 664 aa22.3■■□□□ 1.16
NFKB1-204ENST00000504044 ECE1P42892 770 aa22.3■■□□□ 1.16
NFKB1-204ENST00000504044 PTPN12Q05209 780 aaKnown RBP22.3■■□□□ 1.16
NFKB1-204ENST00000504044 SCARF1Q14162 830 aa22.3■■□□□ 1.16
NFKB1-204ENST00000504044 USP48Q86UV5 1035 aa22.3■■□□□ 1.16
NFKB1-204ENST00000504044 DZIP1LQ8IYY4 767 aaKnown RBP22.3■■□□□ 1.16
NFKB1-204ENST00000504044 KLHDC4Q8TBB5 520 aa22.3■■□□□ 1.16
NFKB1-204ENST00000504044 ZNF408Q9H9D4 720 aa22.3■■□□□ 1.16
NFKB1-204ENST00000504044 CEP126Q9P2H0 1117 aa22.3■■□□□ 1.16
NFKB1-204ENST00000504044 PITPNM2Q9BZ72 1349 aa22.3■■□□□ 1.16
NFKB1-204ENST00000504044 RASSF10A6NK89 507 aa22.29■■□□□ 1.16
NFKB1-204ENST00000504044 EGFRP00533 1210 aa22.29■■□□□ 1.16
NFKB1-204ENST00000504044 IL15P40933 162 aaPredicted RBP22.29■■□□□ 1.16
NFKB1-204ENST00000504044 RFX5P48382 616 aaPredicted RBP22.29■■□□□ 1.16
NFKB1-204ENST00000504044 PAXIP1Q6ZW49 1069 aaPredicted RBP22.29■■□□□ 1.16
NFKB1-204ENST00000504044 KIAA0825Q8IV33 1275 aa22.29■■□□□ 1.16
NFKB1-204ENST00000504044 SRGAP3O43295 1099 aa22.28■■□□□ 1.16
NFKB1-204ENST00000504044 GYG1P46976 350 aa22.28■■□□□ 1.16
NFKB1-204ENST00000504044 ANGEL2Q5VTE6 544 aaKnown RBP22.28■■□□□ 1.16
NFKB1-204ENST00000504044 TDRD7Q8NHU6 1098 aaKnown RBP22.28■■□□□ 1.16
NFKB1-204ENST00000504044 LPIN2Q92539 896 aa22.28■■□□□ 1.16
NFKB1-204ENST00000504044 FAM84BQ96KN1 310 aaPredicted RBP22.28■■□□□ 1.16
NFKB1-204ENST00000504044 SCN9AQ15858 1988 aa22.28■■□□□ 1.16
NFKB1-204ENST00000504044 MYO1BO43795 1136 aa22.27■■□□□ 1.16
NFKB1-204ENST00000504044 TMEM57Q8N5G2 664 aa22.27■■□□□ 1.16
NFKB1-204ENST00000504044 VGLL2Q8N8G2 317 aa22.27■■□□□ 1.16
NFKB1-204ENST00000504044 TBC1D22AQ8WUA7 517 aa22.27■■□□□ 1.16
NFKB1-204ENST00000504044 MXD3Q9BW11 206 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms