RNA–Protein interactions for RNA: ENST00000504012.1

LINC01340-201, Transcript of long intergenic non-protein coding RNA 1340, humanhuman

TSL 3 BASIC

Gene LINC01340, Length 724 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01340-201ENST00000504012 ESYT1Q9BSJ8 1104 aa6.87□□□□□ -1.31
LINC01340-201ENST00000504012 CARD6Q9BX69 1037 aa6.87□□□□□ -1.31
LINC01340-201ENST00000504012 API5Q9BZZ5 524 aaKnown RBP6.87□□□□□ -1.31
LINC01340-201ENST00000504012 ATP6V0A4Q9HBG4 840 aa6.87□□□□□ -1.31
LINC01340-201ENST00000504012 PDE11AQ9HCR9 933 aa6.87□□□□□ -1.31
LINC01340-201ENST00000504012 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.87□□□□□ -1.31
LINC01340-201ENST00000504012 SH2B1Q9NRF2 756 aaPredicted RBP6.87□□□□□ -1.31
LINC01340-201ENST00000504012 TRMT1Q9NXH9 659 aaKnown RBP6.87□□□□□ -1.31
LINC01340-201ENST00000504012 MYO6Q9UM54 1294 aa6.87□□□□□ -1.31
LINC01340-201ENST00000504012 LIMCH1Q9UPQ0 1083 aa6.87□□□□□ -1.31
LINC01340-201ENST00000504012 TBC1D2BQ9UPU7 963 aa6.87□□□□□ -1.31
LINC01340-201ENST00000504012 MRFAP1Q9Y605 127 aa6.87□□□□□ -1.31
LINC01340-201ENST00000504012 TCHHQ07283 1943 aa6.87□□□□□ -1.31
LINC01340-201ENST00000504012 IQGAP2Q13576 1575 aa6.86□□□□□ -1.31
LINC01340-201ENST00000504012 DUOX2Q9NRD8 1548 aa6.86□□□□□ -1.31
LINC01340-201ENST00000504012 IFT140Q96RY7 1462 aa6.86□□□□□ -1.31
LINC01340-201ENST00000504012 ASXL2Q76L83 1435 aa6.86□□□□□ -1.31
LINC01340-201ENST00000504012 MAP3K5Q99683 1374 aa6.86□□□□□ -1.31
LINC01340-201ENST00000504012 URI1O94763 535 aaPredicted RBP6.86□□□□□ -1.31
LINC01340-201ENST00000504012 GNAI3P08754 354 aa6.86□□□□□ -1.31
LINC01340-201ENST00000504012 PPP2R3AQ06190 1150 aa6.86□□□□□ -1.31
LINC01340-201ENST00000504012 CCDC96Q2M329 555 aa6.86□□□□□ -1.31
LINC01340-201ENST00000504012 CWC27Q6UX04 472 aaKnown RBP6.86□□□□□ -1.31
LINC01340-201ENST00000504012 HOMER1Q86YM7 354 aa6.86□□□□□ -1.31
LINC01340-201ENST00000504012 RBM12BQ8IXT5 1001 aaKnown RBP6.86□□□□□ -1.31
LINC01340-201ENST00000504012 RPUSD2Q8IZ73 545 aaKnown RBP6.86□□□□□ -1.31
LINC01340-201ENST00000504012 HS6ST3Q8IZP7 471 aa6.86□□□□□ -1.31
LINC01340-201ENST00000504012 KCNB2Q92953 911 aa6.86□□□□□ -1.31
LINC01340-201ENST00000504012 JPH2Q9BR39 696 aaPredicted RBP6.86□□□□□ -1.31
LINC01340-201ENST00000504012 UBA5Q9GZZ9 404 aa6.86□□□□□ -1.31
LINC01340-201ENST00000504012 NAT10Q9H0A0 1025 aaKnown RBP6.86□□□□□ -1.31
LINC01340-201ENST00000504012 ANO10Q9NW15 660 aa6.86□□□□□ -1.31
LINC01340-201ENST00000504012 CHCHD3Q9NX63 227 aaKnown RBP6.86□□□□□ -1.31
LINC01340-201ENST00000504012 SMC3Q9UQE7 1217 aa6.86□□□□□ -1.31
LINC01340-201ENST00000504012 MTMR6Q9Y217 621 aa6.86□□□□□ -1.31
LINC01340-201ENST00000504012 FAN1Q9Y2M0 1017 aa6.86□□□□□ -1.31
LINC01340-201ENST00000504012 CEP152O94986 1710 aa6.86□□□□□ -1.31
LINC01340-201ENST00000504012 GPATCH8Q9UKJ3 1502 aaKnown RBP6.86□□□□□ -1.31
LINC01340-201ENST00000504012 TROQ12816 1431 aaPredicted RBP6.85□□□□□ -1.31
LINC01340-201ENST00000504012 NSD2O96028 1365 aa6.85□□□□□ -1.31
LINC01340-201ENST00000504012 AOX1Q06278 1338 aa6.85□□□□□ -1.31
LINC01340-201ENST00000504012 RPGRIP1LQ68CZ1 1315 aa6.85□□□□□ -1.31
LINC01340-201ENST00000504012 H7C1W4 665 aa6.85□□□□□ -1.31
LINC01340-201ENST00000504012 LIN7AO14910 233 aaPredicted RBP6.85□□□□□ -1.31
LINC01340-201ENST00000504012 ZEB2O60315 1214 aa6.85□□□□□ -1.31
LINC01340-201ENST00000504012 MARCH6O60337 910 aa6.85□□□□□ -1.31
LINC01340-201ENST00000504012 IMPDH2P12268 514 aa6.85□□□□□ -1.31
LINC01340-201ENST00000504012 EZRP15311 586 aaKnown RBP6.85□□□□□ -1.31
LINC01340-201ENST00000504012 SFPQP23246 707 aaKnown RBP eCLIP6.85□□□□□ -1.31
LINC01340-201ENST00000504012 PAX7P23759 505 aa6.85□□□□□ -1.31
LINC01340-201ENST00000504012 SLC8A1P32418 973 aa6.85□□□□□ -1.31
LINC01340-201ENST00000504012 AMPHP49418 695 aa6.85□□□□□ -1.31
LINC01340-201ENST00000504012 LMNB2Q03252 620 aa6.85□□□□□ -1.31
LINC01340-201ENST00000504012 IFFO1Q0D2I5 559 aa6.85□□□□□ -1.31
LINC01340-201ENST00000504012 IRF5Q13568 498 aa6.85□□□□□ -1.31
LINC01340-201ENST00000504012 DCTN1Q14203 1278 aa6.85□□□□□ -1.31
LINC01340-201ENST00000504012 CDCA2Q69YH5 1023 aaPredicted RBP6.85□□□□□ -1.31
LINC01340-201ENST00000504012 WDR93Q6P2C0 686 aa6.85□□□□□ -1.31
LINC01340-201ENST00000504012 CPLX2Q6PUV4 134 aaKnown RBP6.85□□□□□ -1.31
LINC01340-201ENST00000504012 SRGAP1Q7Z6B7 1085 aa6.85□□□□□ -1.31
LINC01340-201ENST00000504012 PABPN1Q86U42 306 aaKnown RBP eCLIP6.85□□□□□ -1.31
LINC01340-201ENST00000504012 MRPL50Q8N5N7 158 aaKnown RBP6.85□□□□□ -1.31
LINC01340-201ENST00000504012 LRRN4CLQ8ND94 238 aa6.85□□□□□ -1.31
LINC01340-201ENST00000504012 MICAL1Q8TDZ2 1067 aa6.85□□□□□ -1.31
LINC01340-201ENST00000504012 HOOK2Q96ED9 719 aa6.85□□□□□ -1.31
LINC01340-201ENST00000504012 SAAL1Q96ER3 474 aa6.85□□□□□ -1.31
LINC01340-201ENST00000504012 CCDC34Q96HJ3 373 aa6.85□□□□□ -1.31
LINC01340-201ENST00000504012 TTC14Q96N46 770 aa6.85□□□□□ -1.31
LINC01340-201ENST00000504012 MMTAG2Q9BU76 263 aaKnown RBP6.85□□□□□ -1.31
LINC01340-201ENST00000504012 CFDP1Q9UEE9 299 aaPredicted RBP6.85□□□□□ -1.31
LINC01340-201ENST00000504012 PPME1Q9Y570 386 aa6.85□□□□□ -1.31
LINC01340-201ENST00000504012 ARHGEF5Q12774 1597 aa6.85□□□□□ -1.31
LINC01340-201ENST00000504012 NEURL4Q96JN8 1562 aa6.85□□□□□ -1.31
LINC01340-201ENST00000504012 RAD54L2Q9Y4B4 1467 aa6.85□□□□□ -1.31
LINC01340-201ENST00000504012 UNC13BO14795 1591 aa6.84□□□□□ -1.31
LINC01340-201ENST00000504012 SHTN1A0MZ66 631 aa6.84□□□□□ -1.31
LINC01340-201ENST00000504012 GOLGA6L4A6NEF3 574 aa6.84□□□□□ -1.31
LINC01340-201ENST00000504012 PDLIM1O00151 329 aa6.84□□□□□ -1.31
LINC01340-201ENST00000504012 FIBPO43427 364 aa6.84□□□□□ -1.31
LINC01340-201ENST00000504012 AHCYL1O43865 530 aa6.84□□□□□ -1.31
LINC01340-201ENST00000504012 PPFIA3O75145 1194 aa6.84□□□□□ -1.31
LINC01340-201ENST00000504012 RASSF9O75901 435 aa6.84□□□□□ -1.31
LINC01340-201ENST00000504012 CDKL5O76039 1030 aa6.84□□□□□ -1.31
LINC01340-201ENST00000504012 KIAA0754O94854 1291 aa6.84□□□□□ -1.31
LINC01340-201ENST00000504012 PRPF6O94906 941 aaKnown RBP6.84□□□□□ -1.31
LINC01340-201ENST00000504012 HSPA4P34932 840 aa6.84□□□□□ -1.31
LINC01340-201ENST00000504012 LIG3P49916 1009 aa6.84□□□□□ -1.31
LINC01340-201ENST00000504012 CCNHP51946 323 aaPredicted RBP6.84□□□□□ -1.31
LINC01340-201ENST00000504012 DNM1Q05193 864 aaKnown RBP6.84□□□□□ -1.31
LINC01340-201ENST00000504012 PPFIA1Q13136 1202 aa6.84□□□□□ -1.31
LINC01340-201ENST00000504012 PLEKHO1Q53GL0 409 aaPredicted RBP6.84□□□□□ -1.31
LINC01340-201ENST00000504012 C1QTNF12Q5T7M4 302 aa6.84□□□□□ -1.31
LINC01340-201ENST00000504012 ATL3Q6DD88 541 aa6.84□□□□□ -1.31
LINC01340-201ENST00000504012 TTC19Q6DKK2 380 aaPredicted RBP6.84□□□□□ -1.31
LINC01340-201ENST00000504012 NBPF15Q8N660 670 aa6.84□□□□□ -1.31
LINC01340-201ENST00000504012 ZNF513Q8N8E2 541 aaPredicted RBP6.84□□□□□ -1.31
LINC01340-201ENST00000504012 OSBPL9Q96SU4 736 aa6.84□□□□□ -1.31
LINC01340-201ENST00000504012 CARD14Q9BXL6 1004 aa6.84□□□□□ -1.31
LINC01340-201ENST00000504012 STK31Q9BXU1 1019 aa6.84□□□□□ -1.31
LINC01340-201ENST00000504012 TM6SF1Q9BZW5 370 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms