RNA–Protein interactions for RNA: ENST00000502870.1

HERC6-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 4

Gene HERC6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-204ENST00000502870 HTTP42858 3142 aa23.37■■□□□ 1.33
HERC6-204ENST00000502870 OTOP1Q7RTM1 612 aa23.37■■□□□ 1.33
HERC6-204ENST00000502870 ERO1AQ96HE7 468 aa23.37■■□□□ 1.33
HERC6-204ENST00000502870 CDC5LQ99459 802 aaKnown RBP23.37■■□□□ 1.33
HERC6-204ENST00000502870 R3HDMLQ9H3Y0 253 aa23.37■■□□□ 1.33
HERC6-204ENST00000502870 LAMB1P07942 1786 aa23.37■■□□□ 1.33
HERC6-204ENST00000502870 COL1A1P02452 1464 aaPredicted RBP23.36■■□□□ 1.33
HERC6-204ENST00000502870 POTEFA5A3E0 1075 aa23.36■■□□□ 1.33
HERC6-204ENST00000502870 PCCAP05165 728 aaPredicted RBP23.36■■□□□ 1.33
HERC6-204ENST00000502870 PRKG1Q13976 671 aa23.36■■□□□ 1.33
HERC6-204ENST00000502870 DACT2Q5SW24 774 aa23.36■■□□□ 1.33
HERC6-204ENST00000502870 LDLRAD1Q5T700 205 aa23.36■■□□□ 1.33
HERC6-204ENST00000502870 STRIP1Q5VSL9 837 aa23.36■■□□□ 1.33
HERC6-204ENST00000502870 CCDC191Q8NCU4 936 aa23.36■■□□□ 1.33
HERC6-204ENST00000502870 FBXW7Q969H0 707 aa23.36■■□□□ 1.33
HERC6-204ENST00000502870 ANGEL1Q9UNK9 670 aaKnown RBP23.36■■□□□ 1.33
HERC6-204ENST00000502870 MKI67P46013 3256 aaKnown RBP23.36■■□□□ 1.33
HERC6-204ENST00000502870 ZNF646O15015 1829 aaPredicted RBP23.36■■□□□ 1.33
HERC6-204ENST00000502870 ZBTB48P10074 688 aaPredicted RBP23.35■■□□□ 1.33
HERC6-204ENST00000502870 IFNL1Q8IU54 200 aa23.35■■□□□ 1.33
HERC6-204ENST00000502870 CEP290O15078 2479 aa23.35■■□□□ 1.33
HERC6-204ENST00000502870 MYH3P11055 1940 aa23.34■■□□□ 1.33
HERC6-204ENST00000502870 SASH1O94885 1247 aa23.34■■□□□ 1.33
HERC6-204ENST00000502870 NEUROD2Q15784 382 aa23.34■■□□□ 1.33
HERC6-204ENST00000502870 OTUD7BQ6GQQ9 843 aa23.34■■□□□ 1.33
HERC6-204ENST00000502870 SLC10A4Q96EP9 437 aa23.34■■□□□ 1.33
HERC6-204ENST00000502870 CCDC85AQ96PX6 553 aaPredicted RBP23.34■■□□□ 1.33
HERC6-204ENST00000502870 SPEF2Q9C093 1822 aa23.33■■□□□ 1.33
HERC6-204ENST00000502870 FXR1P51114 621 aaKnown RBP eCLIP23.33■■□□□ 1.33
HERC6-204ENST00000502870 MYD88Q99836 296 aa23.33■■□□□ 1.33
HERC6-204ENST00000502870 COA1Q9GZY4 146 aa23.33■■□□□ 1.33
HERC6-204ENST00000502870 CWC25Q9NXE8 425 aaPredicted RBP23.33■■□□□ 1.33
HERC6-204ENST00000502870 PTPN22Q9Y2R2 807 aa23.33■■□□□ 1.33
HERC6-204ENST00000502870 DUSP27Q5VZP5 1158 aa23.32■■□□□ 1.32
HERC6-204ENST00000502870 UNCXA6NJT0 531 aa23.31■■□□□ 1.32
HERC6-204ENST00000502870 PPP1R12BO60237 982 aaPredicted RBP23.31■■□□□ 1.32
HERC6-204ENST00000502870 ARMC5Q96C12 935 aa23.31■■□□□ 1.32
HERC6-204ENST00000502870 TMEM106CQ9BVX2 250 aa23.31■■□□□ 1.32
HERC6-204ENST00000502870 MXD3Q9BW11 206 aa23.31■■□□□ 1.32
HERC6-204ENST00000502870 BSDC1Q9NW68 430 aaPredicted RBP23.3■■□□□ 1.32
HERC6-204ENST00000502870 ECM29Q5VYK3 1845 aa23.3■■□□□ 1.32
HERC6-204ENST00000502870 CENPFP49454 3210 aa23.29■■□□□ 1.32
HERC6-204ENST00000502870 CCT4P50991 539 aaKnown RBP23.29■■□□□ 1.32
HERC6-204ENST00000502870 MAP3K11Q16584 847 aa23.29■■□□□ 1.32
HERC6-204ENST00000502870 WNK4Q96J92 1243 aa23.29■■□□□ 1.32
HERC6-204ENST00000502870 EFCC1Q9HA90 598 aa23.29■■□□□ 1.32
HERC6-204ENST00000502870 DDX58O95786 925 aaKnown RBP23.28■■□□□ 1.32
HERC6-204ENST00000502870 TTLL5Q6EMB2 1281 aa23.28■■□□□ 1.32
HERC6-204ENST00000502870 MINPP1Q9UNW1 487 aa23.28■■□□□ 1.32
HERC6-204ENST00000502870 PPP2R3BQ9Y5P8 575 aa23.28■■□□□ 1.32
HERC6-204ENST00000502870 TRIOBPQ9H2D6 2365 aa23.27■■□□□ 1.32
HERC6-204ENST00000502870 IGF2BP3O00425 579 aaKnown RBP eCLIP23.27■■□□□ 1.32
HERC6-204ENST00000502870 CTSWP56202 376 aa23.27■■□□□ 1.32
HERC6-204ENST00000502870 ARHGEF6Q15052 776 aa23.27■■□□□ 1.32
HERC6-204ENST00000502870 KIAA0825Q8IV33 1275 aa23.27■■□□□ 1.32
HERC6-204ENST00000502870 DEFB129Q9H1M3 183 aa23.27■■□□□ 1.32
HERC6-204ENST00000502870 LEMD3Q9Y2U8 911 aa23.27■■□□□ 1.32
HERC6-204ENST00000502870 EN2P19622 333 aaPredicted RBP23.26■■□□□ 1.31
HERC6-204ENST00000502870 CD99L2Q8TCZ2 262 aa23.26■■□□□ 1.31
HERC6-204ENST00000502870 CHMP4AQ9BY43 222 aa23.26■■□□□ 1.31
HERC6-204ENST00000502870 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.26■■□□□ 1.31
HERC6-204ENST00000502870 TRIM35Q9UPQ4 493 aa23.26■■□□□ 1.31
HERC6-204ENST00000502870 SP3Q02447 781 aa23.25■■□□□ 1.31
HERC6-204ENST00000502870 CRHR2Q13324 411 aa23.25■■□□□ 1.31
HERC6-204ENST00000502870 DLGAP5Q15398 846 aa23.25■■□□□ 1.31
HERC6-204ENST00000502870 SUPT20HL1Q3ZLR7 823 aa23.25■■□□□ 1.31
HERC6-204ENST00000502870 CCDC146Q8IYE0 955 aa23.25■■□□□ 1.31
HERC6-204ENST00000502870 JARID2Q92833 1246 aaPredicted RBP23.25■■□□□ 1.31
HERC6-204ENST00000502870 ZBED3Q96IU2 234 aaPredicted RBP23.25■■□□□ 1.31
HERC6-204ENST00000502870 METTL22Q9BUU2 404 aaPredicted RBP23.25■■□□□ 1.31
HERC6-204ENST00000502870 PHAXQ9H814 394 aaKnown RBP23.25■■□□□ 1.31
HERC6-204ENST00000502870 MYO1BO43795 1136 aa23.24■■□□□ 1.31
HERC6-204ENST00000502870 IREB2P48200 963 aaKnown RBP23.24■■□□□ 1.31
HERC6-204ENST00000502870 NBPF11Q86T75 865 aa23.24■■□□□ 1.31
HERC6-204ENST00000502870 RUNDC1Q96C34 613 aa23.24■■□□□ 1.31
HERC6-204ENST00000502870 WTIPA6NIX2 430 aaPredicted RBP23.23■■□□□ 1.31
HERC6-204ENST00000502870 TTLL11Q8NHH1 800 aa23.23■■□□□ 1.31
HERC6-204ENST00000502870 CLMNQ96JQ2 1002 aa23.23■■□□□ 1.31
HERC6-204ENST00000502870 ANKRD2Q9GZV1 360 aa23.23■■□□□ 1.31
HERC6-204ENST00000502870 FZD1Q9UP38 647 aa23.23■■□□□ 1.31
HERC6-204ENST00000502870 IGHMBP2P38935 993 aaKnown RBP23.22■■□□□ 1.31
HERC6-204ENST00000502870 RALBP1Q15311 655 aa23.22■■□□□ 1.31
HERC6-204ENST00000502870 GREM2Q9H772 168 aa23.22■■□□□ 1.31
HERC6-204ENST00000502870 MBIPQ9NS73 344 aa23.22■■□□□ 1.31
HERC6-204ENST00000502870 COLQQ9Y215 455 aaPredicted RBP23.22■■□□□ 1.31
HERC6-204ENST00000502870 ZNF804BA4D1E1 1349 aa23.22■■□□□ 1.31
HERC6-204ENST00000502870 GTF2IP78347 998 aa23.21■■□□□ 1.31
HERC6-204ENST00000502870 ZNF333Q96JL9 665 aa23.21■■□□□ 1.31
HERC6-204ENST00000502870 SSC5DA1L4H1 1573 aa23.2■■□□□ 1.3
HERC6-204ENST00000502870 KCNJ4P48050 445 aa23.2■■□□□ 1.3
HERC6-204ENST00000502870 SLC9C1Q4G0N8 1177 aa23.2■■□□□ 1.3
HERC6-204ENST00000502870 TXNRD3Q86VQ6 643 aa23.2■■□□□ 1.3
HERC6-204ENST00000502870 ANKRD13AQ8IZ07 590 aa23.2■■□□□ 1.3
HERC6-204ENST00000502870 MTMR14Q8NCE2 650 aa23.2■■□□□ 1.3
HERC6-204ENST00000502870 NEXNQ0ZGT2 675 aa23.19■■□□□ 1.3
HERC6-204ENST00000502870 SLC4A8Q2Y0W8 1093 aa23.19■■□□□ 1.3
HERC6-204ENST00000502870 BRCA2P51587 3418 aa23.18■■□□□ 1.3
HERC6-204ENST00000502870 WDR43Q15061 677 aaKnown RBP eCLIP23.18■■□□□ 1.3
HERC6-204ENST00000502870 MAP3K2Q9Y2U5 619 aa23.18■■□□□ 1.3
HERC6-204ENST00000502870 TESPA1A2RU30 521 aaPredicted RBP23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms