RNA–Protein interactions for RNA: ENST00000502664.5

GYPB-202, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPB, Length 521 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-202ENST00000502664 GPTP24298 496 aa6.86□□□□□ -1.31
GYPB-202ENST00000502664 DCTN1Q14203 1278 aa6.86□□□□□ -1.31
GYPB-202ENST00000502664 PKDCCQ504Y2 493 aa6.86□□□□□ -1.31
GYPB-202ENST00000502664 PRPF38BQ5VTL8 546 aaKnown RBP6.86□□□□□ -1.31
GYPB-202ENST00000502664 SUSD4Q5VX71 490 aa6.86□□□□□ -1.31
GYPB-202ENST00000502664 TREML4Q6UXN2 200 aa6.86□□□□□ -1.31
GYPB-202ENST00000502664 NPM2Q86SE8 214 aaKnown RBP6.86□□□□□ -1.31
GYPB-202ENST00000502664 USP48Q86UV5 1035 aa6.86□□□□□ -1.31
GYPB-202ENST00000502664 NIM1KQ8IY84 436 aa6.86□□□□□ -1.31
GYPB-202ENST00000502664 EMID1Q96A84 441 aaPredicted RBP6.86□□□□□ -1.31
GYPB-202ENST00000502664 HHIPL1Q96JK4 782 aa6.86□□□□□ -1.31
GYPB-202ENST00000502664 TMUB1Q9BVT8 246 aa6.86□□□□□ -1.31
GYPB-202ENST00000502664 YDJCA8MPS7 323 aa6.85□□□□□ -1.31
GYPB-202ENST00000502664 PPEF1O14829 653 aaPredicted RBP6.85□□□□□ -1.31
GYPB-202ENST00000502664 U2SURPO15042 1029 aaKnown RBP6.85□□□□□ -1.31
GYPB-202ENST00000502664 MAP3K7O43318 606 aa6.85□□□□□ -1.31
GYPB-202ENST00000502664 TRPA1O75762 1119 aa6.85□□□□□ -1.31
GYPB-202ENST00000502664 RAD17O75943 681 aa6.85□□□□□ -1.31
GYPB-202ENST00000502664 HOXA10P31260 410 aaPredicted RBP6.85□□□□□ -1.31
GYPB-202ENST00000502664 PRSS12P56730 875 aa6.85□□□□□ -1.31
GYPB-202ENST00000502664 HUNKP57058 714 aa6.85□□□□□ -1.31
GYPB-202ENST00000502664 KIF23Q02241 960 aaPredicted RBP6.85□□□□□ -1.31
GYPB-202ENST00000502664 CNGB1Q14028 1251 aaPredicted RBP6.85□□□□□ -1.31
GYPB-202ENST00000502664 CC2D1BQ5T0F9 858 aaKnown RBP6.85□□□□□ -1.31
GYPB-202ENST00000502664 TTLL7Q6ZT98 887 aa6.85□□□□□ -1.31
GYPB-202ENST00000502664 MCM10Q7L590 875 aa6.85□□□□□ -1.31
GYPB-202ENST00000502664 TATDN2Q93075 761 aa6.85□□□□□ -1.31
GYPB-202ENST00000502664 RNF186Q9NXI6 227 aa6.85□□□□□ -1.31
GYPB-202ENST00000502664 MIS18AQ9NYP9 233 aa6.85□□□□□ -1.31
GYPB-202ENST00000502664 ZNF652Q9Y2D9 606 aa6.85□□□□□ -1.31
GYPB-202ENST00000502664 KNSTRNQ9Y448 316 aa6.85□□□□□ -1.31
GYPB-202ENST00000502664 RIC1Q4ADV7 1423 aa6.84□□□□□ -1.31
GYPB-202ENST00000502664 ASTN2O75129 1339 aaPredicted RBP6.84□□□□□ -1.31
GYPB-202ENST00000502664 ADM5C9JUS6 153 aa6.84□□□□□ -1.31
GYPB-202ENST00000502664 SNRPA1P09661 255 aaKnown RBP6.84□□□□□ -1.31
GYPB-202ENST00000502664 GTF2E1P29083 439 aaPredicted RBP6.84□□□□□ -1.31
GYPB-202ENST00000502664 NOGQ13253 232 aa6.84□□□□□ -1.31
GYPB-202ENST00000502664 NBR1Q14596 966 aa6.84□□□□□ -1.31
GYPB-202ENST00000502664 GAS2L2Q8NHY3 880 aa6.84□□□□□ -1.31
GYPB-202ENST00000502664 RPGRQ92834 1020 aaKnown RBP6.84□□□□□ -1.31
GYPB-202ENST00000502664 ZNF428Q96B54 188 aa6.84□□□□□ -1.31
GYPB-202ENST00000502664 ZNRF3Q9ULT6 936 aa6.84□□□□□ -1.31
GYPB-202ENST00000502664 PER1O15534 1290 aaPredicted RBP6.83□□□□□ -1.32
GYPB-202ENST00000502664 NTSR2O95665 410 aa6.83□□□□□ -1.32
GYPB-202ENST00000502664 PRKAR2BP31323 418 aa6.83□□□□□ -1.32
GYPB-202ENST00000502664 SLC19A1P41440 591 aa6.83□□□□□ -1.32
GYPB-202ENST00000502664 COPS2P61201 443 aa6.83□□□□□ -1.32
GYPB-202ENST00000502664 CC2D2BQ6DHV5 1058 aa6.83□□□□□ -1.32
GYPB-202ENST00000502664 RGMBQ6NW40 437 aa6.83□□□□□ -1.32
GYPB-202ENST00000502664 CDC37L1Q7L3B6 337 aa6.83□□□□□ -1.32
GYPB-202ENST00000502664 CRAMP1Q96RY5 1269 aa6.83□□□□□ -1.32
GYPB-202ENST00000502664 CSRNP1Q96S65 589 aa6.83□□□□□ -1.32
GYPB-202ENST00000502664 RSPH6AQ9H0K4 717 aa6.83□□□□□ -1.32
GYPB-202ENST00000502664 ZBTB3Q9H5J0 574 aa6.83□□□□□ -1.32
GYPB-202ENST00000502664 KCNQ5Q9NR82 932 aa6.83□□□□□ -1.32
GYPB-202ENST00000502664 CNOT7Q9UIV1 285 aaKnown RBP6.83□□□□□ -1.32
GYPB-202ENST00000502664 PNMA3Q9UL41 463 aa6.83□□□□□ -1.32
GYPB-202ENST00000502664 ATP6V0A2Q9Y487 856 aa6.83□□□□□ -1.32
GYPB-202ENST00000502664 COL4A1P02462 1669 aa6.83□□□□□ -1.32
GYPB-202ENST00000502664 NUP98P52948 1817 aa6.83□□□□□ -1.32
GYPB-202ENST00000502664 MKI67P46013 3256 aaKnown RBP6.82□□□□□ -1.32
GYPB-202ENST00000502664 DUOX1Q9NRD9 1551 aa6.82□□□□□ -1.32
GYPB-202ENST00000502664 ABCC4O15439 1325 aa6.82□□□□□ -1.32
GYPB-202ENST00000502664 KIF7Q2M1P5 1343 aa6.82□□□□□ -1.32
GYPB-202ENST00000502664 RNF40O75150 1001 aa6.82□□□□□ -1.32
GYPB-202ENST00000502664 EIF4G2P78344 907 aaKnown RBP eCLIP6.82□□□□□ -1.32
GYPB-202ENST00000502664 TBC1D10BQ4KMP7 808 aaPredicted RBP6.82□□□□□ -1.32
GYPB-202ENST00000502664 RBM17Q96I25 401 aaKnown RBP6.82□□□□□ -1.32
GYPB-202ENST00000502664 BCL2L13Q9BXK5 485 aa6.82□□□□□ -1.32
GYPB-202ENST00000502664 RTFDC1Q9BY42 306 aaPredicted RBP6.82□□□□□ -1.32
GYPB-202ENST00000502664 GBA2Q9HCG7 927 aaPredicted RBP6.82□□□□□ -1.32
GYPB-202ENST00000502664 SCAF8Q9UPN6 1271 aaKnown RBP6.82□□□□□ -1.32
GYPB-202ENST00000502664 TAF1P21675 1872 aa6.81□□□□□ -1.32
GYPB-202ENST00000502664 MAP3K15Q6ZN16 1313 aa6.81□□□□□ -1.32
GYPB-202ENST00000502664 MYL6BP14649 208 aa6.81□□□□□ -1.32
GYPB-202ENST00000502664 ZNF157P51786 506 aaPredicted RBP6.81□□□□□ -1.32
GYPB-202ENST00000502664 PRR20EP86478 221 aa6.81□□□□□ -1.32
GYPB-202ENST00000502664 PRR20CP86479 221 aa6.81□□□□□ -1.32
GYPB-202ENST00000502664 PRR20DP86480 221 aa6.81□□□□□ -1.32
GYPB-202ENST00000502664 PRR20BP86481 221 aa6.81□□□□□ -1.32
GYPB-202ENST00000502664 PRR20AP86496 221 aa6.81□□□□□ -1.32
GYPB-202ENST00000502664 KIAA2012Q0VF49 1180 aa6.81□□□□□ -1.32
GYPB-202ENST00000502664 RBM26Q5T8P6 1007 aaKnown RBP6.81□□□□□ -1.32
GYPB-202ENST00000502664 MOB2Q70IA6 237 aa6.81□□□□□ -1.32
GYPB-202ENST00000502664 CTU1Q7Z7A3 348 aaKnown RBP6.81□□□□□ -1.32
GYPB-202ENST00000502664 ZNF34Q8IZ26 560 aa6.81□□□□□ -1.32
GYPB-202ENST00000502664 ZC3H15Q8WU90 426 aaKnown RBP6.81□□□□□ -1.32
GYPB-202ENST00000502664 THUMPD2Q9BTF0 503 aaKnown RBP6.81□□□□□ -1.32
GYPB-202ENST00000502664 NYXQ9GZU5 481 aa6.81□□□□□ -1.32
GYPB-202ENST00000502664 SAGE1Q9NXZ1 904 aa6.81□□□□□ -1.32
GYPB-202ENST00000502664 RRP7AQ9Y3A4 280 aaKnown RBP6.81□□□□□ -1.32
GYPB-202ENST00000502664 LAMB4A4D0S4 1761 aa6.8□□□□□ -1.32
GYPB-202ENST00000502664 LAMB2P55268 1798 aa6.8□□□□□ -1.32
GYPB-202ENST00000502664 ERVV-1B6SEH8 477 aa6.8□□□□□ -1.32
GYPB-202ENST00000502664 RNF223E7ERA6 249 aa6.8□□□□□ -1.32
GYPB-202ENST00000502664 PSMD14O00487 310 aa6.8□□□□□ -1.32
GYPB-202ENST00000502664 TBC1D8O95759 1140 aa6.8□□□□□ -1.32
GYPB-202ENST00000502664 SLC10A3P09131 477 aa6.8□□□□□ -1.32
GYPB-202ENST00000502664 HABP4Q5JVS0 413 aaKnown RBP6.8□□□□□ -1.32
GYPB-202ENST00000502664 PDE4DIPQ5VU43 2346 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms