RNA–Protein interactions for RNA: ENST00000502575.1

PDE4D-209, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-209ENST00000502575 PDE4DQ08499 809 aa11.64□□□□□ -0.55
PDE4D-209ENST00000502575 DCTN1Q14203 1278 aa11.64□□□□□ -0.55
PDE4D-209ENST00000502575 MCM10Q7L590 875 aa11.64□□□□□ -0.55
PDE4D-209ENST00000502575 ZNF526Q8TF50 670 aaPredicted RBP11.64□□□□□ -0.55
PDE4D-209ENST00000502575 AAASQ9NRG9 546 aa11.64□□□□□ -0.55
PDE4D-209ENST00000502575 PRAMEF22A3QJZ6 481 aa11.63□□□□□ -0.55
PDE4D-209ENST00000502575 GIGYF1O75420 1035 aaPredicted RBP11.63□□□□□ -0.55
PDE4D-209ENST00000502575 TM4SF1P30408 202 aa11.63□□□□□ -0.55
PDE4D-209ENST00000502575 CHRNA5P30532 468 aa11.63□□□□□ -0.55
PDE4D-209ENST00000502575 C1QTNF8P60827 252 aa11.63□□□□□ -0.55
PDE4D-209ENST00000502575 NFIXQ14938 502 aa11.63□□□□□ -0.55
PDE4D-209ENST00000502575 PRR7Q8TB68 274 aa11.63□□□□□ -0.55
PDE4D-209ENST00000502575 MRGPRX2Q96LB1 330 aa11.63□□□□□ -0.55
PDE4D-209ENST00000502575 NARFQ9UHQ1 456 aa11.63□□□□□ -0.55
PDE4D-209ENST00000502575 LAMB2P55268 1798 aa11.63□□□□□ -0.55
PDE4D-209ENST00000502575 PIP4K2AP48426 406 aaPredicted RBP11.62□□□□□ -0.55
PDE4D-209ENST00000502575 EIF5P55010 431 aaKnown RBP11.62□□□□□ -0.55
PDE4D-209ENST00000502575 TUSC1Q2TAM9 212 aa11.62□□□□□ -0.55
PDE4D-209ENST00000502575 ZBTB3Q9H5J0 574 aa11.62□□□□□ -0.55
PDE4D-209ENST00000502575 EVA1BQ9NVM1 165 aa11.62□□□□□ -0.55
PDE4D-209ENST00000502575 NUDCQ9Y266 331 aa11.62□□□□□ -0.55
PDE4D-209ENST00000502575 BTBD11A6QL63 1104 aa11.61□□□□□ -0.55
PDE4D-209ENST00000502575 A1BGP04217 495 aa11.61□□□□□ -0.55
PDE4D-209ENST00000502575 FMNL2Q96PY5 1086 aa11.61□□□□□ -0.55
PDE4D-209ENST00000502575 ZNF330Q9Y3S2 320 aaPredicted RBP11.61□□□□□ -0.55
PDE4D-209ENST00000502575 TAF1P21675 1872 aa11.6□□□□□ -0.55
PDE4D-209ENST00000502575 SENP3-EIF4A1A0A087X0R7 540 aa11.6□□□□□ -0.55
PDE4D-209ENST00000502575 AXIN1O15169 862 aa11.6□□□□□ -0.55
PDE4D-209ENST00000502575 STARD3NLO95772 234 aa11.6□□□□□ -0.55
PDE4D-209ENST00000502575 BICDL1Q6ZP65 573 aa11.6□□□□□ -0.55
PDE4D-209ENST00000502575 TBC1D2BQ9UPU7 963 aa11.6□□□□□ -0.55
PDE4D-209ENST00000502575 WDR90Q96KV7 1748 aa11.6□□□□□ -0.55
PDE4D-209ENST00000502575 TBC1D9BQ66K14 1250 aa11.59□□□□□ -0.55
PDE4D-209ENST00000502575 ARHGAP27Q6ZUM4 889 aa11.59□□□□□ -0.55
PDE4D-209ENST00000502575 GPBP1L1Q9HC44 474 aaPredicted RBP11.59□□□□□ -0.55
PDE4D-209ENST00000502575 MIS18AQ9NYP9 233 aa11.59□□□□□ -0.55
PDE4D-209ENST00000502575 USP16Q9Y5T5 823 aa11.59□□□□□ -0.55
PDE4D-209ENST00000502575 SERPINB2P05120 415 aa11.58□□□□□ -0.56
PDE4D-209ENST00000502575 SKOR1P84550 965 aa11.58□□□□□ -0.56
PDE4D-209ENST00000502575 KCNH2Q12809 1159 aa11.58□□□□□ -0.56
PDE4D-209ENST00000502575 RIC3Q7Z5B4 369 aa11.58□□□□□ -0.56
PDE4D-209ENST00000502575 RTF1Q92541 710 aaKnown RBP11.58□□□□□ -0.56
PDE4D-209ENST00000502575 PLEKHF1Q96S99 279 aa11.58□□□□□ -0.56
PDE4D-209ENST00000502575 THUMPD2Q9BTF0 503 aaKnown RBP11.58□□□□□ -0.56
PDE4D-209ENST00000502575 SLC24A3Q9HC58 644 aa11.58□□□□□ -0.56
PDE4D-209ENST00000502575 PIM2Q9P1W9 311 aa11.58□□□□□ -0.56
PDE4D-209ENST00000502575 SMPD1P17405 629 aa11.57□□□□□ -0.56
PDE4D-209ENST00000502575 IL6STP40189 918 aaPredicted RBP11.57□□□□□ -0.56
PDE4D-209ENST00000502575 DALRD3Q5D0E6 543 aaKnown RBP11.57□□□□□ -0.56
PDE4D-209ENST00000502575 ST8SIA5O15466 376 aa11.56□□□□□ -0.56
PDE4D-209ENST00000502575 CAMTA2O94983 1202 aa11.56□□□□□ -0.56
PDE4D-209ENST00000502575 RASSF7Q02833 373 aa11.56□□□□□ -0.56
PDE4D-209ENST00000502575 DDX10Q13206 875 aaKnown RBP11.56□□□□□ -0.56
PDE4D-209ENST00000502575 PTCRAQ6ISU1 281 aaPredicted RBP11.56□□□□□ -0.56
PDE4D-209ENST00000502575 TEX13AQ9BXU3 409 aaPredicted RBP11.56□□□□□ -0.56
PDE4D-209ENST00000502575 UNC93B1Q9H1C4 597 aa11.56□□□□□ -0.56
PDE4D-209ENST00000502575 A0A087WZG4 1122 aa11.55□□□□□ -0.56
PDE4D-209ENST00000502575 PRELPP51888 382 aa11.55□□□□□ -0.56
PDE4D-209ENST00000502575 PRR5LQ6MZQ0 368 aa11.55□□□□□ -0.56
PDE4D-209ENST00000502575 NBPF10Q6P3W6 841 aaKnown RBP11.55□□□□□ -0.56
PDE4D-209ENST00000502575 LYPD8Q6UX82 237 aa11.55□□□□□ -0.56
PDE4D-209ENST00000502575 NBPF15Q8N660 670 aa11.55□□□□□ -0.56
PDE4D-209ENST00000502575 EHBP1Q8NDI1 1231 aa11.55□□□□□ -0.56
PDE4D-209ENST00000502575 HTATSF1O43719 755 aaKnown RBP11.54□□□□□ -0.56
PDE4D-209ENST00000502575 SNRPA1P09661 255 aaKnown RBP11.54□□□□□ -0.56
PDE4D-209ENST00000502575 TAF7Q15545 349 aaPredicted RBP11.54□□□□□ -0.56
PDE4D-209ENST00000502575 NFE2L2Q16236 605 aa11.54□□□□□ -0.56
PDE4D-209ENST00000502575 C9orf131Q5VYM1 1079 aa11.54□□□□□ -0.56
PDE4D-209ENST00000502575 DZIP3Q86Y13 1208 aaKnown RBP11.54□□□□□ -0.56
PDE4D-209ENST00000502575 C2CD5Q86YS7 1000 aa11.54□□□□□ -0.56
PDE4D-209ENST00000502575 DDX60Q8IY21 1712 aaKnown RBP11.54□□□□□ -0.56
PDE4D-209ENST00000502575 MYSM1Q5VVJ2 828 aa11.53□□□□□ -0.56
PDE4D-209ENST00000502575 NMRK2Q9NPI5 230 aa11.53□□□□□ -0.56
PDE4D-209ENST00000502575 MPNDQ8N594 471 aa11.52□□□□□ -0.57
PDE4D-209ENST00000502575 RNF181Q9P0P0 153 aa11.52□□□□□ -0.57
PDE4D-209ENST00000502575 PCDHB15Q9Y5E8 787 aa11.52□□□□□ -0.57
PDE4D-209ENST00000502575 MAPK8IP3Q9UPT6 1336 aa11.52□□□□□ -0.57
PDE4D-209ENST00000502575 H0YIN7 160 aa11.51□□□□□ -0.57
PDE4D-209ENST00000502575 SIAH2O43255 324 aa11.51□□□□□ -0.57
PDE4D-209ENST00000502575 SH3BP2P78314 561 aa11.51□□□□□ -0.57
PDE4D-209ENST00000502575 RALBP1Q15311 655 aa11.51□□□□□ -0.57
PDE4D-209ENST00000502575 CNBD1Q8NA66 436 aa11.51□□□□□ -0.57
PDE4D-209ENST00000502575 SCN4AP35499 1836 aa11.51□□□□□ -0.57
PDE4D-209ENST00000502575 J3QL48 77 aa11.5□□□□□ -0.57
PDE4D-209ENST00000502575 NFKBIEO00221 500 aa11.5□□□□□ -0.57
PDE4D-209ENST00000502575 NEFMP07197 916 aa11.5□□□□□ -0.57
PDE4D-209ENST00000502575 VARSP26640 1264 aaKnown RBP11.5□□□□□ -0.57
PDE4D-209ENST00000502575 EIF4A1P60842 406 aaKnown RBP11.5□□□□□ -0.57
PDE4D-209ENST00000502575 HLFQ16534 295 aa11.5□□□□□ -0.57
PDE4D-209ENST00000502575 CCDC146Q8IYE0 955 aa11.5□□□□□ -0.57
PDE4D-209ENST00000502575 TTLL6Q8N841 843 aa11.5□□□□□ -0.57
PDE4D-209ENST00000502575 ZNF511Q8NB15 262 aa11.5□□□□□ -0.57
PDE4D-209ENST00000502575 SETDB2Q96T68 719 aa11.5□□□□□ -0.57
PDE4D-209ENST00000502575 RRP7AQ9Y3A4 280 aaKnown RBP11.5□□□□□ -0.57
PDE4D-209ENST00000502575 SPEF2Q9C093 1822 aa11.5□□□□□ -0.57
PDE4D-209ENST00000502575 MYBBP1AQ9BQG0 1328 aaKnown RBP11.5□□□□□ -0.57
PDE4D-209ENST00000502575 FAM177BA6PVY3 158 aa11.49□□□□□ -0.57
PDE4D-209ENST00000502575 CFAP99D6REC4 459 aa11.49□□□□□ -0.57
PDE4D-209ENST00000502575 NPM2Q86SE8 214 aaKnown RBP11.49□□□□□ -0.57
PDE4D-209ENST00000502575 NGEFQ8N5V2 710 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms