RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 APOBRQ0VD83 1088 aa19.53■□□□□ 0.72
VCAN-204ENST00000502527 HSP90AB3PQ58FF7 597 aa19.53■□□□□ 0.72
VCAN-204ENST00000502527 NAA16Q6N069 864 aaPredicted RBP19.53■□□□□ 0.72
VCAN-204ENST00000502527 NSUN7Q8NE18 718 aaKnown RBP19.53■□□□□ 0.72
VCAN-204ENST00000502527 OSBP2Q969R2 916 aa19.53■□□□□ 0.72
VCAN-204ENST00000502527 DDX19AQ9NUU7 478 aaKnown RBP19.53■□□□□ 0.72
VCAN-204ENST00000502527 CFAP45Q9UL16 551 aa19.53■□□□□ 0.72
VCAN-204ENST00000502527 ZNF274Q96GC6 653 aaPredicted RBP19.53■□□□□ 0.72
VCAN-204ENST00000502527 CCDC85AQ96PX6 553 aaPredicted RBP19.52■□□□□ 0.72
VCAN-204ENST00000502527 STRCQ7RTU9 1775 aa19.52■□□□□ 0.71
VCAN-204ENST00000502527 TERF1P54274 439 aa19.52■□□□□ 0.71
VCAN-204ENST00000502527 WASHC4Q2M389 1173 aa19.52■□□□□ 0.71
VCAN-204ENST00000502527 FBXL16Q8N461 479 aa19.52■□□□□ 0.71
VCAN-204ENST00000502527 TNMDQ9H2S6 317 aa19.52■□□□□ 0.71
VCAN-204ENST00000502527 BTG4Q9NY30 223 aa19.52■□□□□ 0.71
VCAN-204ENST00000502527 DACT1Q9NYF0 836 aa19.52■□□□□ 0.71
VCAN-204ENST00000502527 PTPDC1A2A3K4 754 aa19.51■□□□□ 0.71
VCAN-204ENST00000502527 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.51■□□□□ 0.71
VCAN-204ENST00000502527 A0A0G2JLW4 131 aa19.5■□□□□ 0.71
VCAN-204ENST00000502527 CTDNEP1O95476 244 aa19.5■□□□□ 0.71
VCAN-204ENST00000502527 IMMTQ16891 758 aaKnown RBP19.5■□□□□ 0.71
VCAN-204ENST00000502527 NLRP10Q86W26 655 aa19.5■□□□□ 0.71
VCAN-204ENST00000502527 CAMK4Q16566 473 aa19.5■□□□□ 0.71
VCAN-204ENST00000502527 ATP2B3Q16720 1220 aa19.5■□□□□ 0.71
VCAN-204ENST00000502527 METTL24Q5JXM2 366 aa19.5■□□□□ 0.71
VCAN-204ENST00000502527 APPBP2Q92624 585 aa19.5■□□□□ 0.71
VCAN-204ENST00000502527 CLSTN2Q9H4D0 955 aa19.5■□□□□ 0.71
VCAN-204ENST00000502527 RIPOR2Q9Y4F9 1068 aa19.5■□□□□ 0.71
VCAN-204ENST00000502527 KCNA4P22459 653 aa19.49■□□□□ 0.71
VCAN-204ENST00000502527 PDIA3P30101 505 aaKnown RBP19.49■□□□□ 0.71
VCAN-204ENST00000502527 ZAP70P43403 619 aa19.49■□□□□ 0.71
VCAN-204ENST00000502527 KIAA2012Q0VF49 1180 aa19.49■□□□□ 0.71
VCAN-204ENST00000502527 TTLL5Q6EMB2 1281 aa19.49■□□□□ 0.71
VCAN-204ENST00000502527 LDHAL6AQ6ZMR3 332 aa19.49■□□□□ 0.71
VCAN-204ENST00000502527 TTLL11Q8NHH1 800 aa19.49■□□□□ 0.71
VCAN-204ENST00000502527 FAM200AQ8TCP9 573 aa19.49■□□□□ 0.71
VCAN-204ENST00000502527 BICD2Q8TD16 824 aa19.49■□□□□ 0.71
VCAN-204ENST00000502527 NHSL1Q5SYE7 1610 aa19.49■□□□□ 0.71
VCAN-204ENST00000502527 ANKRD18BA2A2Z9 1011 aa19.48■□□□□ 0.71
VCAN-204ENST00000502527 ITGA6P23229 1130 aa19.48■□□□□ 0.71
VCAN-204ENST00000502527 CCT2P78371 535 aaKnown RBP19.48■□□□□ 0.71
VCAN-204ENST00000502527 TYRO3Q06418 890 aa19.48■□□□□ 0.71
VCAN-204ENST00000502527 SCARF1Q14162 830 aa19.48■□□□□ 0.71
VCAN-204ENST00000502527 HLFQ16534 295 aa19.48■□□□□ 0.71
VCAN-204ENST00000502527 PGBD1Q96JS3 809 aa19.48■□□□□ 0.71
VCAN-204ENST00000502527 NAP1L2Q9ULW6 460 aaPredicted RBP19.48■□□□□ 0.71
VCAN-204ENST00000502527 CYP19A1P11511 503 aaPredicted RBP19.48■□□□□ 0.71
VCAN-204ENST00000502527 GPTP24298 496 aa19.48■□□□□ 0.71
VCAN-204ENST00000502527 CTSWP56202 376 aa19.48■□□□□ 0.71
VCAN-204ENST00000502527 EVCP57679 992 aa19.48■□□□□ 0.71
VCAN-204ENST00000502527 ATL3Q6DD88 541 aa19.48■□□□□ 0.71
VCAN-204ENST00000502527 RBM43Q6ZSC3 357 aaKnown RBP19.48■□□□□ 0.71
VCAN-204ENST00000502527 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.48■□□□□ 0.71
VCAN-204ENST00000502527 LAMA4Q16363 1823 aa19.48■□□□□ 0.71
VCAN-204ENST00000502527 BCL9O00512 1426 aa19.47■□□□□ 0.71
VCAN-204ENST00000502527 RIC1Q4ADV7 1423 aa19.47■□□□□ 0.71
VCAN-204ENST00000502527 MRVI1Q9Y6F6 885 aa19.47■□□□□ 0.71
VCAN-204ENST00000502527 SALL1Q9NSC2 1324 aa19.47■□□□□ 0.71
VCAN-204ENST00000502527 FOXP2O15409 715 aa19.47■□□□□ 0.71
VCAN-204ENST00000502527 PLCB2Q00722 1185 aa19.47■□□□□ 0.71
VCAN-204ENST00000502527 CHST3Q7LGC8 479 aa19.47■□□□□ 0.71
VCAN-204ENST00000502527 SYNE4Q8N205 404 aa19.47■□□□□ 0.71
VCAN-204ENST00000502527 ZNF512BQ96KM6 892 aaPredicted RBP19.47■□□□□ 0.71
VCAN-204ENST00000502527 GREM2Q9H772 168 aa19.47■□□□□ 0.71
VCAN-204ENST00000502527 NCOA5Q9HCD5 579 aaKnown RBP19.47■□□□□ 0.71
VCAN-204ENST00000502527 CNNM1Q9NRU3 951 aa19.47■□□□□ 0.71
VCAN-204ENST00000502527 DISP2A7MBM2 1401 aa19.46■□□□□ 0.71
VCAN-204ENST00000502527 IRS4O14654 1257 aaPredicted RBP19.46■□□□□ 0.71
VCAN-204ENST00000502527 FGAP02671 866 aa19.46■□□□□ 0.71
VCAN-204ENST00000502527 ZSCAN25Q6NSZ9 544 aa19.46■□□□□ 0.71
VCAN-204ENST00000502527 NR1I2O75469 434 aa19.45■□□□□ 0.7
VCAN-204ENST00000502527 ADD1P35611 737 aaKnown RBP19.45■□□□□ 0.7
VCAN-204ENST00000502527 CKAP2LQ8IYA6 745 aa19.45■□□□□ 0.7
VCAN-204ENST00000502527 ZNF396Q96N95 335 aaPredicted RBP19.45■□□□□ 0.7
VCAN-204ENST00000502527 TRMT112Q9UI30 125 aaKnown RBP19.45■□□□□ 0.7
VCAN-204ENST00000502527 RCOR1Q9UKL0 485 aa19.45■□□□□ 0.7
VCAN-204ENST00000502527 TTF1Q15361 905 aaPredicted RBP19.45■□□□□ 0.7
VCAN-204ENST00000502527 SLC4A9Q96Q91 983 aa19.45■□□□□ 0.7
VCAN-204ENST00000502527 PUS7LQ9H0K6 701 aaKnown RBP19.45■□□□□ 0.7
VCAN-204ENST00000502527 R3HCC1Q9Y3T6 440 aaKnown RBP19.45■□□□□ 0.7
VCAN-204ENST00000502527 ERVV-1B6SEH8 477 aa19.44■□□□□ 0.7
VCAN-204ENST00000502527 TPM3P06753 285 aa19.44■□□□□ 0.7
VCAN-204ENST00000502527 HAND2P61296 217 aa19.44■□□□□ 0.7
VCAN-204ENST00000502527 EXOC5O00471 708 aa19.44■□□□□ 0.7
VCAN-204ENST00000502527 GPAA1O43292 621 aa19.44■□□□□ 0.7
VCAN-204ENST00000502527 DHX16O60231 1041 aaKnown RBP19.44■□□□□ 0.7
VCAN-204ENST00000502527 PDE8AO60658 829 aa19.44■□□□□ 0.7
VCAN-204ENST00000502527 MCAMP43121 646 aa19.44■□□□□ 0.7
VCAN-204ENST00000502527 SASS6Q6UVJ0 657 aa19.44■□□□□ 0.7
VCAN-204ENST00000502527 PI16Q6UXB8 463 aa19.44■□□□□ 0.7
VCAN-204ENST00000502527 NCOA7Q8NI08 942 aa19.44■□□□□ 0.7
VCAN-204ENST00000502527 DNAJC5Q9H3Z4 198 aa19.44■□□□□ 0.7
VCAN-204ENST00000502527 ZBTB1Q9Y2K1 713 aa19.44■□□□□ 0.7
VCAN-204ENST00000502527 LRP6O75581 1613 aa19.43■□□□□ 0.7
VCAN-204ENST00000502527 ZNF213O14771 459 aa19.43■□□□□ 0.7
VCAN-204ENST00000502527 AP5Z1O43299 807 aa19.43■□□□□ 0.7
VCAN-204ENST00000502527 PRC1O43663 620 aa19.43■□□□□ 0.7
VCAN-204ENST00000502527 FOSBP53539 338 aa19.43■□□□□ 0.7
VCAN-204ENST00000502527 MB21D2Q8IYB1 491 aaPredicted RBP19.43■□□□□ 0.7
VCAN-204ENST00000502527 CARMIL3Q8ND23 1372 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms