RNA–Protein interactions for RNA: ENST00000502315.1

SH3RF1-202, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 4

Gene SH3RF1, Length 487 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-202ENST00000502315 GRM1Q13255 1194 aa9.17□□□□□ -0.94
SH3RF1-202ENST00000502315 SCARF1Q14162 830 aa9.17□□□□□ -0.94
SH3RF1-202ENST00000502315 C15orf52Q6ZUT6 534 aaKnown RBP9.17□□□□□ -0.94
SH3RF1-202ENST00000502315 C8orf58Q8NAV2 365 aa9.17□□□□□ -0.94
SH3RF1-202ENST00000502315 CFHR5Q9BXR6 569 aa9.17□□□□□ -0.94
SH3RF1-202ENST00000502315 MCOLN1Q9GZU1 580 aa9.17□□□□□ -0.94
SH3RF1-202ENST00000502315 MYH16Q9H6N6 1097 aa9.17□□□□□ -0.94
SH3RF1-202ENST00000502315 MYOZ2Q9NPC6 264 aa9.17□□□□□ -0.94
SH3RF1-202ENST00000502315 SEC31BQ9NQW1 1179 aa9.17□□□□□ -0.94
SH3RF1-202ENST00000502315 MAP3K2Q9Y2U5 619 aa9.17□□□□□ -0.94
SH3RF1-202ENST00000502315 PI4KAP2A4QPH2 592 aa9.16□□□□□ -0.94
SH3RF1-202ENST00000502315 CSF1RP07333 972 aa9.16□□□□□ -0.94
SH3RF1-202ENST00000502315 IGHMBP2P38935 993 aaKnown RBP9.16□□□□□ -0.94
SH3RF1-202ENST00000502315 TM4SF4P48230 202 aa9.16□□□□□ -0.94
SH3RF1-202ENST00000502315 CCT4P50991 539 aaKnown RBP9.16□□□□□ -0.94
SH3RF1-202ENST00000502315 FKBP1AP62942 108 aaKnown RBP9.16□□□□□ -0.94
SH3RF1-202ENST00000502315 KIF23Q02241 960 aaPredicted RBP9.16□□□□□ -0.94
SH3RF1-202ENST00000502315 SLC51AQ86UW1 340 aa9.16□□□□□ -0.94
SH3RF1-202ENST00000502315 PI4KAP1Q8N8J0 262 aa9.16□□□□□ -0.94
SH3RF1-202ENST00000502315 CSRNP1Q96S65 589 aa9.16□□□□□ -0.94
SH3RF1-202ENST00000502315 RNF186Q9NXI6 227 aa9.16□□□□□ -0.94
SH3RF1-202ENST00000502315 GGA3Q9NZ52 723 aa9.16□□□□□ -0.94
SH3RF1-202ENST00000502315 PCDH10Q9P2E7 1040 aa9.16□□□□□ -0.94
SH3RF1-202ENST00000502315 HDAC9Q9UKV0 1011 aa9.16□□□□□ -0.94
SH3RF1-202ENST00000502315 SHTN1A0MZ66 631 aa9.15□□□□□ -0.94
SH3RF1-202ENST00000502315 NEURL1BA8MQ27 555 aa9.15□□□□□ -0.94
SH3RF1-202ENST00000502315 ALDH1A1P00352 501 aa9.15□□□□□ -0.94
SH3RF1-202ENST00000502315 EGFRP00533 1210 aa9.15□□□□□ -0.94
SH3RF1-202ENST00000502315 IGKV5-2P06315 115 aa9.15□□□□□ -0.94
SH3RF1-202ENST00000502315 DGKZQ13574 1117 aa9.15□□□□□ -0.94
SH3RF1-202ENST00000502315 RTL5Q5HYW3 569 aaPredicted RBP9.15□□□□□ -0.94
SH3RF1-202ENST00000502315 DACT2Q5SW24 774 aa9.15□□□□□ -0.94
SH3RF1-202ENST00000502315 RBM26Q5T8P6 1007 aaKnown RBP9.15□□□□□ -0.94
SH3RF1-202ENST00000502315 ANGEL2Q5VTE6 544 aaKnown RBP9.15□□□□□ -0.94
SH3RF1-202ENST00000502315 APOBEC3FQ8IUX4 373 aaKnown RBP9.15□□□□□ -0.94
SH3RF1-202ENST00000502315 WDR63Q8IWG1 891 aa9.15□□□□□ -0.94
SH3RF1-202ENST00000502315 WWC1Q8IX03 1113 aa9.15□□□□□ -0.94
SH3RF1-202ENST00000502315 MTMR14Q8NCE2 650 aa9.15□□□□□ -0.94
SH3RF1-202ENST00000502315 LINS1Q8NG48 757 aa9.15□□□□□ -0.94
SH3RF1-202ENST00000502315 CDCA5Q96FF9 252 aa9.15□□□□□ -0.94
SH3RF1-202ENST00000502315 KCNQ5Q9NR82 932 aa9.15□□□□□ -0.94
SH3RF1-202ENST00000502315 PPP2R3BQ9Y5P8 575 aa9.15□□□□□ -0.94
SH3RF1-202ENST00000502315 COL1A1P02452 1464 aaPredicted RBP9.15□□□□□ -0.95
SH3RF1-202ENST00000502315 PSME4Q14997 1843 aa9.15□□□□□ -0.95
SH3RF1-202ENST00000502315 ADM5C9JUS6 153 aa9.14□□□□□ -0.95
SH3RF1-202ENST00000502315 ELL2O00472 640 aaPredicted RBP9.14□□□□□ -0.95
SH3RF1-202ENST00000502315 SLC34A2O95436 690 aa9.14□□□□□ -0.95
SH3RF1-202ENST00000502315 SREBF2Q12772 1141 aa9.14□□□□□ -0.95
SH3RF1-202ENST00000502315 GCKRQ14397 625 aa9.14□□□□□ -0.95
SH3RF1-202ENST00000502315 TWISTNBQ3B726 338 aaPredicted RBP9.14□□□□□ -0.95
SH3RF1-202ENST00000502315 FAM161AQ3B820 660 aa9.14□□□□□ -0.95
SH3RF1-202ENST00000502315 TTLL5Q6EMB2 1281 aa9.14□□□□□ -0.95
SH3RF1-202ENST00000502315 ARMC9Q7Z3E5 817 aa9.14□□□□□ -0.95
SH3RF1-202ENST00000502315 CTU1Q7Z7A3 348 aaKnown RBP9.14□□□□□ -0.95
SH3RF1-202ENST00000502315 MPHOSPH8Q99549 860 aa9.14□□□□□ -0.95
SH3RF1-202ENST00000502315 TAF1P21675 1872 aa9.14□□□□□ -0.95
SH3RF1-202ENST00000502315 PAPPA2Q9BXP8 1791 aa9.14□□□□□ -0.95
SH3RF1-202ENST00000502315 WNT10BO00744 389 aa9.13□□□□□ -0.95
SH3RF1-202ENST00000502315 TRPA1O75762 1119 aa9.13□□□□□ -0.95
SH3RF1-202ENST00000502315 MAP3K11Q16584 847 aa9.13□□□□□ -0.95
SH3RF1-202ENST00000502315 RASAL3Q86YV0 1011 aa9.13□□□□□ -0.95
SH3RF1-202ENST00000502315 GREM2Q9H772 168 aa9.13□□□□□ -0.95
SH3RF1-202ENST00000502315 CACNA1FO60840 1977 aa9.13□□□□□ -0.95
SH3RF1-202ENST00000502315 ZNF804BA4D1E1 1349 aa9.12□□□□□ -0.95
SH3RF1-202ENST00000502315 POLR2AP24928 1970 aaKnown RBP9.12□□□□□ -0.95
SH3RF1-202ENST00000502315 ITGA6P23229 1130 aa9.12□□□□□ -0.95
SH3RF1-202ENST00000502315 LDLRAD1Q5T700 205 aa9.12□□□□□ -0.95
SH3RF1-202ENST00000502315 TSPYL6Q8N831 410 aa9.12□□□□□ -0.95
SH3RF1-202ENST00000502315 DNAAF4Q8WXU2 420 aa9.12□□□□□ -0.95
SH3RF1-202ENST00000502315 ZBED3Q96IU2 234 aaPredicted RBP9.12□□□□□ -0.95
SH3RF1-202ENST00000502315 SCN9AQ15858 1988 aa9.12□□□□□ -0.95
SH3RF1-202ENST00000502315 AKAP11Q9UKA4 1901 aa9.11□□□□□ -0.95
SH3RF1-202ENST00000502315 ANKRD18BA2A2Z9 1011 aa9.11□□□□□ -0.95
SH3RF1-202ENST00000502315 MYO1BO43795 1136 aa9.11□□□□□ -0.95
SH3RF1-202ENST00000502315 ZBTB48P10074 688 aaPredicted RBP9.11□□□□□ -0.95
SH3RF1-202ENST00000502315 IL1R1P14778 569 aa9.11□□□□□ -0.95
SH3RF1-202ENST00000502315 CASP7P55210 303 aa9.11□□□□□ -0.95
SH3RF1-202ENST00000502315 FLIIQ13045 1269 aa9.11□□□□□ -0.95
SH3RF1-202ENST00000502315 IFIT5Q13325 482 aaKnown RBP9.11□□□□□ -0.95
SH3RF1-202ENST00000502315 SUPT20HL1Q3ZLR7 823 aa9.11□□□□□ -0.95
SH3RF1-202ENST00000502315 ZIC5Q96T25 663 aa9.11□□□□□ -0.95
SH3RF1-202ENST00000502315 CD209Q9NNX6 404 aa9.11□□□□□ -0.95
SH3RF1-202ENST00000502315 TSKSQ9UJT2 592 aa9.11□□□□□ -0.95
SH3RF1-202ENST00000502315 CASP8AP2Q9UKL3 1982 aa9.1□□□□□ -0.95
SH3RF1-202ENST00000502315 MYH3P11055 1940 aa9.1□□□□□ -0.95
SH3RF1-202ENST00000502315 MANSC4A6NHS7 340 aaPredicted RBP9.1□□□□□ -0.95
SH3RF1-202ENST00000502315 PPP1R12BO60237 982 aaPredicted RBP9.1□□□□□ -0.95
SH3RF1-202ENST00000502315 VAMP4O75379 141 aa9.1□□□□□ -0.95
SH3RF1-202ENST00000502315 CWF19L2Q2TBE0 894 aaKnown RBP9.1□□□□□ -0.95
SH3RF1-202ENST00000502315 NBPF9Q3BBW0 867 aa9.1□□□□□ -0.95
SH3RF1-202ENST00000502315 UBE3BQ7Z3V4 1068 aa9.1□□□□□ -0.95
SH3RF1-202ENST00000502315 ALDH1L1O75891 902 aa9.09□□□□□ -0.95
SH3RF1-202ENST00000502315 SASH1O94885 1247 aa9.09□□□□□ -0.95
SH3RF1-202ENST00000502315 KCNJ4P48050 445 aa9.09□□□□□ -0.95
SH3RF1-202ENST00000502315 CHRNDQ07001 517 aa9.09□□□□□ -0.95
SH3RF1-202ENST00000502315 FKBP5Q13451 457 aaPredicted RBP9.09□□□□□ -0.95
SH3RF1-202ENST00000502315 DLGAP5Q15398 846 aa9.09□□□□□ -0.95
SH3RF1-202ENST00000502315 INTS3Q68E01 1043 aaKnown RBP9.09□□□□□ -0.95
SH3RF1-202ENST00000502315 OTUD7BQ6GQQ9 843 aa9.09□□□□□ -0.95
SH3RF1-202ENST00000502315 ZNF804AQ7Z570 1209 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms