RNA–Protein interactions for RNA: ENST00000498678.5

HOXB3-212, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HOXB3, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-212ENST00000498678 RASEFQ8IZ41 740 aa31.34■■■□□ 2.61
HOXB3-212ENST00000498678 MINPP1Q9UNW1 487 aa31.34■■■□□ 2.61
HOXB3-212ENST00000498678 TNS1Q9HBL0 1735 aaKnown RBP31.34■■■□□ 2.61
HOXB3-212ENST00000498678 TNRC6CQ9HCJ0 1690 aaKnown RBP31.34■■■□□ 2.61
HOXB3-212ENST00000498678 AKAP11Q9UKA4 1901 aa31.33■■■□□ 2.61
HOXB3-212ENST00000498678 RNF113AO15541 343 aaKnown RBP31.33■■■□□ 2.61
HOXB3-212ENST00000498678 NEK4P51957 841 aa31.33■■■□□ 2.61
HOXB3-212ENST00000498678 SLFNL1Q499Z3 407 aa31.33■■■□□ 2.61
HOXB3-212ENST00000498678 KCNB2Q92953 911 aa31.33■■■□□ 2.61
HOXB3-212ENST00000498678 RBM8AQ9Y5S9 174 aaKnown RBP31.33■■■□□ 2.61
HOXB3-212ENST00000498678 ZMYM1Q5SVZ6 1142 aa31.33■■■□□ 2.61
HOXB3-212ENST00000498678 HELLSQ9NRZ9 838 aa31.33■■■□□ 2.61
HOXB3-212ENST00000498678 SERPINB2P05120 415 aa31.32■■■□□ 2.6
HOXB3-212ENST00000498678 PRPF40BQ6NWY9 871 aaKnown RBP31.32■■■□□ 2.6
HOXB3-212ENST00000498678 CCDC129Q6ZRS4 1044 aa31.31■■■□□ 2.6
HOXB3-212ENST00000498678 LRRFIP1Q32MZ4 808 aaKnown RBP31.3■■■□□ 2.6
HOXB3-212ENST00000498678 COL23A1Q86Y22 540 aaPredicted RBP31.3■■■□□ 2.6
HOXB3-212ENST00000498678 CYP2E1P05181 493 aaPredicted RBP31.29■■■□□ 2.6
HOXB3-212ENST00000498678 DDR1Q08345 913 aa31.29■■■□□ 2.6
HOXB3-212ENST00000498678 A0A1B0GUL6 1792 aa31.29■■■□□ 2.6
HOXB3-212ENST00000498678 KCNJ4P48050 445 aa31.28■■■□□ 2.6
HOXB3-212ENST00000498678 UBE4AQ14139 1066 aa31.28■■■□□ 2.6
HOXB3-212ENST00000498678 HMG20BQ9P0W2 317 aa31.28■■■□□ 2.6
HOXB3-212ENST00000498678 POLRMTO00411 1230 aaKnown RBP31.27■■■□□ 2.6
HOXB3-212ENST00000498678 ZFYP08048 801 aaPredicted RBP31.27■■■□□ 2.6
HOXB3-212ENST00000498678 BCAMP50895 628 aa31.27■■■□□ 2.6
HOXB3-212ENST00000498678 TTF1Q15361 905 aaPredicted RBP31.27■■■□□ 2.6
HOXB3-212ENST00000498678 CREB3L3Q68CJ9 461 aa31.27■■■□□ 2.6
HOXB3-212ENST00000498678 UPF3BQ9BZI7 483 aaKnown RBP31.27■■■□□ 2.6
HOXB3-212ENST00000498678 WTIPA6NIX2 430 aaPredicted RBP31.26■■■□□ 2.6
HOXB3-212ENST00000498678 ST5P78524 1137 aa31.26■■■□□ 2.6
HOXB3-212ENST00000498678 RGPD3A6NKT7 1758 aaPredicted RBP31.26■■■□□ 2.59
HOXB3-212ENST00000498678 RGPD4Q7Z3J3 1758 aa31.26■■■□□ 2.59
HOXB3-212ENST00000498678 RASGRF1Q13972 1273 aa31.26■■■□□ 2.59
HOXB3-212ENST00000498678 SPATA5Q8NB90 893 aa31.26■■■□□ 2.59
HOXB3-212ENST00000498678 IL27Q8NEV9 243 aa31.26■■■□□ 2.59
HOXB3-212ENST00000498678 PIH1D3Q9NQM4 214 aaKnown RBP31.26■■■□□ 2.59
HOXB3-212ENST00000498678 FLAD1Q8NFF5 587 aa31.25■■■□□ 2.59
HOXB3-212ENST00000498678 MAST3O60307 1309 aa31.25■■■□□ 2.59
HOXB3-212ENST00000498678 SLC27A2O14975 620 aa31.24■■■□□ 2.59
HOXB3-212ENST00000498678 OSBP2Q969R2 916 aa31.24■■■□□ 2.59
HOXB3-212ENST00000498678 ZKSCAN1P17029 563 aaPredicted RBP31.23■■■□□ 2.59
HOXB3-212ENST00000498678 DDX24Q9GZR7 859 aaKnown RBP eCLIP31.23■■■□□ 2.593e-8■■□□□ 14.5
HOXB3-212ENST00000498678 MCM2P49736 904 aa31.23■■■□□ 2.59
HOXB3-212ENST00000498678 GRAPQ13588 217 aa31.23■■■□□ 2.59
HOXB3-212ENST00000498678 CRY2Q49AN0 593 aa31.23■■■□□ 2.59
HOXB3-212ENST00000498678 NLGN1Q8N2Q7 840 aa31.23■■■□□ 2.59
HOXB3-212ENST00000498678 GRAPLQ8TC17 118 aaPredicted RBP31.23■■■□□ 2.59
HOXB3-212ENST00000498678 M0R2C6 588 aa31.22■■■□□ 2.59
HOXB3-212ENST00000498678 DDIT3P35638 169 aa31.22■■■□□ 2.59
HOXB3-212ENST00000498678 ADCK5Q3MIX3 580 aa31.22■■■□□ 2.59
HOXB3-212ENST00000498678 ANKRD2Q9GZV1 360 aa31.22■■■□□ 2.59
HOXB3-212ENST00000498678 HSP90AA1P07900 732 aaKnown RBP31.22■■■□□ 2.59
HOXB3-212ENST00000498678 RNF20Q5VTR2 975 aa31.22■■■□□ 2.59
HOXB3-212ENST00000498678 ZNF804BA4D1E1 1349 aa31.21■■■□□ 2.59
HOXB3-212ENST00000498678 APPBP2Q92624 585 aa31.21■■■□□ 2.59
HOXB3-212ENST00000498678 TM6SF1Q9BZW5 370 aa31.21■■■□□ 2.59
HOXB3-212ENST00000498678 U3KPZ7 1027 aaPredicted RBP31.21■■■□□ 2.59
HOXB3-212ENST00000498678 WASHC4Q2M389 1173 aa31.2■■■□□ 2.59
HOXB3-212ENST00000498678 ZSCAN25Q6NSZ9 544 aa31.2■■■□□ 2.59
HOXB3-212ENST00000498678 PNPLA7Q6ZV29 1317 aa31.2■■■□□ 2.59
HOXB3-212ENST00000498678 GYG1P46976 350 aa31.2■■■□□ 2.58
HOXB3-212ENST00000498678 VPS53Q5VIR6 699 aa31.2■■■□□ 2.58
HOXB3-212ENST00000498678 DSCC1Q9BVC3 393 aa31.2■■■□□ 2.58
HOXB3-212ENST00000498678 ADD2P35612 726 aa31.19■■■□□ 2.58
HOXB3-212ENST00000498678 JAKMIP1Q96N16 626 aaKnown RBP31.19■■■□□ 2.58
HOXB3-212ENST00000498678 CAMKK2Q96RR4 588 aa31.19■■■□□ 2.58
HOXB3-212ENST00000498678 FOXD4L1Q9NU39 408 aa31.19■■■□□ 2.58
HOXB3-212ENST00000498678 CASTP20810 708 aaKnown RBP31.19■■■□□ 2.58
HOXB3-212ENST00000498678 TSGA10IPQ3SY00 556 aa31.19■■■□□ 2.58
HOXB3-212ENST00000498678 SLC9C2Q5TAH2 1124 aa31.19■■■□□ 2.58
HOXB3-212ENST00000498678 RPGRQ92834 1020 aaKnown RBP31.19■■■□□ 2.58
HOXB3-212ENST00000498678 TTC14Q96N46 770 aa31.19■■■□□ 2.58
HOXB3-212ENST00000498678 MYH7P12883 1935 aa31.18■■■□□ 2.58
HOXB3-212ENST00000498678 IDH1O75874 414 aaKnown RBP31.18■■■□□ 2.58
HOXB3-212ENST00000498678 ZSWIM6Q9HCJ5 1215 aa31.18■■■□□ 2.58
HOXB3-212ENST00000498678 EZH2Q15910 746 aaKnown RBP31.17■■■□□ 2.58
HOXB3-212ENST00000498678 CHMP5Q9NZZ3 219 aa31.17■■■□□ 2.58
HOXB3-212ENST00000498678 HSPD1P10809 573 aaKnown RBP31.17■■■□□ 2.58
HOXB3-212ENST00000498678 EN1Q05925 392 aaPredicted RBP31.17■■■□□ 2.58
HOXB3-212ENST00000498678 CAVIN4Q5BKX8 364 aa31.17■■■□□ 2.58
HOXB3-212ENST00000498678 FAM84BQ96KN1 310 aaPredicted RBP31.17■■■□□ 2.58
HOXB3-212ENST00000498678 PUS7LQ9H0K6 701 aaKnown RBP31.17■■■□□ 2.58
HOXB3-212ENST00000498678 TAF6LQ9Y6J9 622 aa31.17■■■□□ 2.58
HOXB3-212ENST00000498678 UBE3CQ15386 1083 aa31.16■■■□□ 2.58
HOXB3-212ENST00000498678 TMX3Q96JJ7 454 aa31.16■■■□□ 2.58
HOXB3-212ENST00000498678 KLRG2A4D1S0 409 aaPredicted RBP31.16■■■□□ 2.58
HOXB3-212ENST00000498678 GNL3LQ9NVN8 582 aaKnown RBP31.16■■■□□ 2.58
HOXB3-212ENST00000498678 MYO5AQ9Y4I1 1855 aaKnown RBP31.16■■■□□ 2.58
HOXB3-212ENST00000498678 RPAP1Q9BWH6 1393 aaPredicted RBP31.15■■■□□ 2.58
HOXB3-212ENST00000498678 CPA1P15085 419 aa31.15■■■□□ 2.58
HOXB3-212ENST00000498678 WWC3Q9ULE0 1092 aa31.15■■■□□ 2.58
HOXB3-212ENST00000498678 PDE6AP16499 860 aa31.15■■■□□ 2.58
HOXB3-212ENST00000498678 NBR1Q14596 966 aa31.15■■■□□ 2.58
HOXB3-212ENST00000498678 FBXO33Q7Z6M2 555 aa31.15■■■□□ 2.58
HOXB3-212ENST00000498678 KLRK1P26718 216 aa31.14■■■□□ 2.58
HOXB3-212ENST00000498678 RBM17Q96I25 401 aaKnown RBP31.14■■■□□ 2.58
HOXB3-212ENST00000498678 IQSEC3Q9UPP2 1182 aaPredicted RBP31.14■■■□□ 2.58
HOXB3-212ENST00000498678 CYP46A1Q9Y6A2 500 aa31.13■■■□□ 2.57
HOXB3-212ENST00000498678 TCRBV5S4A2TA0A5A2 114 aa31.13■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms