RNA–Protein interactions for RNA: ENST00000498500.1

THBS3-209, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 768 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-209ENST00000498500 DUSP27Q5VZP5 1158 aa15.52■□□□□ 0.08
THBS3-209ENST00000498500 ANKRD18AQ8IVF6 992 aa15.52■□□□□ 0.08
THBS3-209ENST00000498500 OGFOD1Q8N543 542 aa15.52■□□□□ 0.08
THBS3-209ENST00000498500 FBXW7Q969H0 707 aa15.52■□□□□ 0.08
THBS3-209ENST00000498500 GCC1Q96CN9 775 aa15.52■□□□□ 0.08
THBS3-209ENST00000498500 MYD88Q99836 296 aa15.52■□□□□ 0.08
THBS3-209ENST00000498500 IFT57Q9NWB7 429 aa15.52■□□□□ 0.08
THBS3-209ENST00000498500 MYH3P11055 1940 aa15.51■□□□□ 0.07
THBS3-209ENST00000498500 CCDC27Q2M243 656 aa15.51■□□□□ 0.07
THBS3-209ENST00000498500 JARID2Q92833 1246 aaPredicted RBP15.51■□□□□ 0.07
THBS3-209ENST00000498500 PCCAP05165 728 aaPredicted RBP15.5■□□□□ 0.07
THBS3-209ENST00000498500 PRKG1Q13976 671 aa15.5■□□□□ 0.07
THBS3-209ENST00000498500 ARMC9Q7Z3E5 817 aa15.5■□□□□ 0.07
THBS3-209ENST00000498500 WNT10BO00744 389 aa15.49■□□□□ 0.07
THBS3-209ENST00000498500 PTPN12Q05209 780 aaKnown RBP15.49■□□□□ 0.07
THBS3-209ENST00000498500 NCBP3Q53F19 620 aaKnown RBP15.49■□□□□ 0.07
THBS3-209ENST00000498500 CCDC191Q8NCU4 936 aa15.49■□□□□ 0.07
THBS3-209ENST00000498500 MXD3Q9BW11 206 aa15.49■□□□□ 0.07
THBS3-209ENST00000498500 PHAXQ9H814 394 aaKnown RBP15.49■□□□□ 0.07
THBS3-209ENST00000498500 CWC25Q9NXE8 425 aaPredicted RBP15.49■□□□□ 0.07
THBS3-209ENST00000498500 ZNF646O15015 1829 aaPredicted RBP15.49■□□□□ 0.07
THBS3-209ENST00000498500 GNAI1P63096 354 aa15.48■□□□□ 0.07
THBS3-209ENST00000498500 CALD1Q05682 793 aaKnown RBP15.48■□□□□ 0.07
THBS3-209ENST00000498500 DACT2Q5SW24 774 aa15.48■□□□□ 0.07
THBS3-209ENST00000498500 WWC1Q8IX03 1113 aa15.48■□□□□ 0.07
THBS3-209ENST00000498500 CDC5LQ99459 802 aaKnown RBP15.48■□□□□ 0.07
THBS3-209ENST00000498500 R3HDMLQ9H3Y0 253 aa15.48■□□□□ 0.07
THBS3-209ENST00000498500 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.48■□□□□ 0.07
THBS3-209ENST00000498500 MED23Q9ULK4 1368 aa15.48■□□□□ 0.07
THBS3-209ENST00000498500 MYO3BQ8WXR4 1341 aa15.47■□□□□ 0.07
THBS3-209ENST00000498500 WTIPA6NIX2 430 aaPredicted RBP15.47■□□□□ 0.07
THBS3-209ENST00000498500 SASH1O94885 1247 aa15.47■□□□□ 0.07
THBS3-209ENST00000498500 ALDH1A1P00352 501 aa15.47■□□□□ 0.07
THBS3-209ENST00000498500 CFHR5Q9BXR6 569 aa15.47■□□□□ 0.07
THBS3-209ENST00000498500 ELL2O00472 640 aaPredicted RBP15.46■□□□□ 0.07
THBS3-209ENST00000498500 STRIP1Q5VSL9 837 aa15.46■□□□□ 0.07
THBS3-209ENST00000498500 APOBEC3FQ8IUX4 373 aaKnown RBP15.46■□□□□ 0.07
THBS3-209ENST00000498500 ANGEL1Q9UNK9 670 aaKnown RBP15.46■□□□□ 0.07
THBS3-209ENST00000498500 TRIM17Q9Y577 477 aa15.46■□□□□ 0.07
THBS3-209ENST00000498500 CCT4P50991 539 aaKnown RBP15.45■□□□□ 0.06
THBS3-209ENST00000498500 SPRYD7Q5W111 196 aa15.45■□□□□ 0.06
THBS3-209ENST00000498500 FAM9BQ8IZU0 186 aa15.45■□□□□ 0.06
THBS3-209ENST00000498500 MINPP1Q9UNW1 487 aa15.45■□□□□ 0.06
THBS3-209ENST00000498500 IL16Q14005 1332 aa15.44■□□□□ 0.06
THBS3-209ENST00000498500 DDX58O95786 925 aaKnown RBP15.44■□□□□ 0.06
THBS3-209ENST00000498500 MMP14P50281 582 aa15.44■□□□□ 0.06
THBS3-209ENST00000498500 CTSWP56202 376 aa15.44■□□□□ 0.06
THBS3-209ENST00000498500 HABP4Q5JVS0 413 aaKnown RBP15.44■□□□□ 0.06
THBS3-209ENST00000498500 INTS3Q68E01 1043 aaKnown RBP15.44■□□□□ 0.06
THBS3-209ENST00000498500 TTLL5Q6EMB2 1281 aa15.44■□□□□ 0.06
THBS3-209ENST00000498500 C8orf58Q8NAV2 365 aa15.44■□□□□ 0.06
THBS3-209ENST00000498500 TSR2Q969E8 191 aaKnown RBP15.44■□□□□ 0.06
THBS3-209ENST00000498500 SLC10A4Q96EP9 437 aa15.44■□□□□ 0.06
THBS3-209ENST00000498500 METTL22Q9BUU2 404 aaPredicted RBP15.44■□□□□ 0.06
THBS3-209ENST00000498500 COA1Q9GZY4 146 aa15.44■□□□□ 0.06
THBS3-209ENST00000498500 BSDC1Q9NW68 430 aaPredicted RBP15.44■□□□□ 0.06
THBS3-209ENST00000498500 ECM29Q5VYK3 1845 aa15.44■□□□□ 0.06
THBS3-209ENST00000498500 RBBP6Q7Z6E9 1792 aaKnown RBP15.44■□□□□ 0.06
THBS3-209ENST00000498500 POTEFA5A3E0 1075 aa15.43■□□□□ 0.06
THBS3-209ENST00000498500 MANSC4A6NHS7 340 aaPredicted RBP15.43■□□□□ 0.06
THBS3-209ENST00000498500 INHBEP58166 350 aa15.43■□□□□ 0.06
THBS3-209ENST00000498500 LDLRAD1Q5T700 205 aa15.43■□□□□ 0.06
THBS3-209ENST00000498500 IFNL1Q8IU54 200 aa15.43■□□□□ 0.06
THBS3-209ENST00000498500 KIAA0825Q8IV33 1275 aa15.43■□□□□ 0.06
THBS3-209ENST00000498500 TTLL11Q8NHH1 800 aa15.43■□□□□ 0.06
THBS3-209ENST00000498500 GREM2Q9H772 168 aa15.43■□□□□ 0.06
THBS3-209ENST00000498500 FZD1Q9UP38 647 aa15.43■□□□□ 0.06
THBS3-209ENST00000498500 MKI67P46013 3256 aaKnown RBP15.43■□□□□ 0.06
THBS3-209ENST00000498500 KIAA0100Q14667 2235 aaKnown RBP15.43■□□□□ 0.06
THBS3-209ENST00000498500 CACNA1FO60840 1977 aa15.42■□□□□ 0.06
THBS3-209ENST00000498500 OTOP1Q7RTM1 612 aa15.42■□□□□ 0.06
THBS3-209ENST00000498500 TXNRD3Q86VQ6 643 aa15.42■□□□□ 0.06
THBS3-209ENST00000498500 TSPYL6Q8N831 410 aa15.42■□□□□ 0.06
THBS3-209ENST00000498500 MAP3K2Q9Y2U5 619 aa15.42■□□□□ 0.06
THBS3-209ENST00000498500 FANCIQ9NVI1 1328 aa15.42■□□□□ 0.06
THBS3-209ENST00000498500 LAMB1P07942 1786 aa15.41■□□□□ 0.06
THBS3-209ENST00000498500 CENPFP49454 3210 aa15.41■□□□□ 0.06
THBS3-209ENST00000498500 GTF2IP78347 998 aa15.41■□□□□ 0.06
THBS3-209ENST00000498500 LEMD3Q9Y2U8 911 aa15.41■□□□□ 0.06
THBS3-209ENST00000498500 ZNF521Q96K83 1311 aa15.41■□□□□ 0.06
THBS3-209ENST00000498500 PPP1R12BO60237 982 aaPredicted RBP15.4■□□□□ 0.06
THBS3-209ENST00000498500 ZBTB48P10074 688 aaPredicted RBP15.4■□□□□ 0.06
THBS3-209ENST00000498500 IGHMBP2P38935 993 aaKnown RBP15.4■□□□□ 0.06
THBS3-209ENST00000498500 ERO1AQ96HE7 468 aa15.4■□□□□ 0.06
THBS3-209ENST00000498500 DEFB129Q9H1M3 183 aa15.4■□□□□ 0.06
THBS3-209ENST00000498500 SALL2Q9Y467 1007 aaPredicted RBP15.4■□□□□ 0.06
THBS3-209ENST00000498500 ZNF804BA4D1E1 1349 aa15.4■□□□□ 0.06
THBS3-209ENST00000498500 COL1A1P02452 1464 aaPredicted RBP15.4■□□□□ 0.06
THBS3-209ENST00000498500 NEXNQ0ZGT2 675 aa15.39■□□□□ 0.05
THBS3-209ENST00000498500 DLGAP5Q15398 846 aa15.39■□□□□ 0.05
THBS3-209ENST00000498500 CCDC30Q5VVM6 783 aa15.39■□□□□ 0.05
THBS3-209ENST00000498500 WDR63Q8IWG1 891 aa15.39■□□□□ 0.05
THBS3-209ENST00000498500 ZBED3Q96IU2 234 aaPredicted RBP15.39■□□□□ 0.05
THBS3-209ENST00000498500 WNK4Q96J92 1243 aa15.39■□□□□ 0.05
THBS3-209ENST00000498500 CLMNQ96JQ2 1002 aa15.39■□□□□ 0.05
THBS3-209ENST00000498500 CHMP4AQ9BY43 222 aa15.39■□□□□ 0.05
THBS3-209ENST00000498500 SPINK5Q9NQ38 1064 aaPredicted RBP15.39■□□□□ 0.05
THBS3-209ENST00000498500 PTPN22Q9Y2R2 807 aa15.39■□□□□ 0.05
THBS3-209ENST00000498500 HTTP42858 3142 aa15.38■□□□□ 0.05
THBS3-209ENST00000498500 CCER2I3L3R5 266 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms