RNA–Protein interactions for RNA: ENST00000498463.5

SNX13-212, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 687 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-212ENST00000498463 PCDH12Q9NPG4 1184 aa11.66□□□□□ -0.54
SNX13-212ENST00000498463 TIMMDC1Q9NPL8 285 aa11.66□□□□□ -0.54
SNX13-212ENST00000498463 PHF20L1A8MW92 1017 aa11.65□□□□□ -0.54
SNX13-212ENST00000498463 SMAD7O15105 426 aaKnown RBP11.65□□□□□ -0.54
SNX13-212ENST00000498463 DNAJC6O75061 913 aa11.65□□□□□ -0.54
SNX13-212ENST00000498463 CCDC81Q6ZN84 652 aa11.65□□□□□ -0.54
SNX13-212ENST00000498463 OR13H1Q8NG92 308 aa11.65□□□□□ -0.54
SNX13-212ENST00000498463 SH3TC2Q8TF17 1288 aa11.65□□□□□ -0.54
SNX13-212ENST00000498463 CDC45O75419 566 aa11.64□□□□□ -0.55
SNX13-212ENST00000498463 SASH3O75995 380 aa11.64□□□□□ -0.55
SNX13-212ENST00000498463 LYSMD3Q7Z3D4 306 aa11.64□□□□□ -0.55
SNX13-212ENST00000498463 CCNJLQ8IV13 435 aa11.64□□□□□ -0.55
SNX13-212ENST00000498463 CEP44Q9C0F1 390 aa11.64□□□□□ -0.55
SNX13-212ENST00000498463 SPC25Q9HBM1 224 aa11.64□□□□□ -0.55
SNX13-212ENST00000498463 PPT2Q9UMR5 302 aa11.64□□□□□ -0.55
SNX13-212ENST00000498463 CHMP4BP1P59074 171 aa11.63□□□□□ -0.55
SNX13-212ENST00000498463 GRIN2CQ14957 1233 aa11.63□□□□□ -0.55
SNX13-212ENST00000498463 TNNI3KQ59H18 835 aa11.63□□□□□ -0.55
SNX13-212ENST00000498463 SLITRK4Q8IW52 837 aa11.63□□□□□ -0.55
SNX13-212ENST00000498463 NKD1Q969G9 470 aa11.63□□□□□ -0.55
SNX13-212ENST00000498463 ZKSCAN3Q9BRR0 538 aa11.63□□□□□ -0.55
SNX13-212ENST00000498463 ZCCHC2Q9C0B9 1178 aaKnown RBP11.63□□□□□ -0.55
SNX13-212ENST00000498463 CRISPLD1Q9H336 500 aa11.63□□□□□ -0.55
SNX13-212ENST00000498463 KANSL2Q9H9L4 492 aa11.63□□□□□ -0.55
SNX13-212ENST00000498463 FANCLQ9NW38 375 aa11.63□□□□□ -0.55
SNX13-212ENST00000498463 MSRB2Q9Y3D2 182 aa11.63□□□□□ -0.55
SNX13-212ENST00000498463 MMP20O60882 483 aa11.62□□□□□ -0.55
SNX13-212ENST00000498463 UPP2O95045 317 aa11.62□□□□□ -0.55
SNX13-212ENST00000498463 RHOQP17081 205 aa11.62□□□□□ -0.55
SNX13-212ENST00000498463 SMPD1P17405 629 aa11.62□□□□□ -0.55
SNX13-212ENST00000498463 TFE3P19532 575 aaPredicted RBP11.62□□□□□ -0.55
SNX13-212ENST00000498463 FAM196AQ6ZSG2 479 aa11.62□□□□□ -0.55
SNX13-212ENST00000498463 KRT25Q7Z3Z0 450 aa11.62□□□□□ -0.55
SNX13-212ENST00000498463 CYP4X1Q8N118 509 aa11.62□□□□□ -0.55
SNX13-212ENST00000498463 CELF2-AS1Q8N7Q2 184 aa11.62□□□□□ -0.55
SNX13-212ENST00000498463 CNTNAP3BQ96NU0 1288 aa11.62□□□□□ -0.55
SNX13-212ENST00000498463 CNTNAP3Q9BZ76 1288 aa11.62□□□□□ -0.55
SNX13-212ENST00000498463 PRKAB1Q9Y478 270 aa11.62□□□□□ -0.55
SNX13-212ENST00000498463 SAMD5Q5TGI4 173 aa11.61□□□□□ -0.55
SNX13-212ENST00000498463 TTBK2Q6IQ55 1244 aa11.61□□□□□ -0.55
SNX13-212ENST00000498463 AGMOQ6ZNB7 445 aa11.61□□□□□ -0.55
SNX13-212ENST00000498463 FAM169BQ8N8A8 192 aa11.61□□□□□ -0.55
SNX13-212ENST00000498463 SLKQ9H2G2 1235 aaPredicted RBP11.61□□□□□ -0.55
SNX13-212ENST00000498463 ZFYVE1Q9HBF4 777 aa11.61□□□□□ -0.55
SNX13-212ENST00000498463 GPAMQ9HCL2 828 aa11.61□□□□□ -0.55
SNX13-212ENST00000498463 ENC1O14682 589 aa11.6□□□□□ -0.55
SNX13-212ENST00000498463 KCNQ4P56696 695 aa11.6□□□□□ -0.55
SNX13-212ENST00000498463 SEZ6Q53EL9 994 aa11.6□□□□□ -0.55
SNX13-212ENST00000498463 DNAJC7Q99615 494 aa11.6□□□□□ -0.55
SNX13-212ENST00000498463 CCDC113Q9H0I3 377 aa11.6□□□□□ -0.55
SNX13-212ENST00000498463 RUBCNLQ9H714 662 aa11.6□□□□□ -0.55
SNX13-212ENST00000498463 ACPPP15309 386 aa11.59□□□□□ -0.55
SNX13-212ENST00000498463 TARSP26639 723 aaKnown RBP11.59□□□□□ -0.55
SNX13-212ENST00000498463 LILRB2Q8N423 598 aa11.59□□□□□ -0.55
SNX13-212ENST00000498463 APPBP2Q92624 585 aa11.59□□□□□ -0.55
SNX13-212ENST00000498463 OSMRQ99650 979 aa11.59□□□□□ -0.55
SNX13-212ENST00000498463 KCNH4Q9UQ05 1017 aa11.59□□□□□ -0.55
SNX13-212ENST00000498463 PPP1R12AO14974 1030 aaPredicted RBP11.58□□□□□ -0.56
SNX13-212ENST00000498463 RARAP10276 462 aa11.58□□□□□ -0.56
SNX13-212ENST00000498463 GRIA4P48058 902 aa11.58□□□□□ -0.56
SNX13-212ENST00000498463 CCINQ13939 588 aa11.58□□□□□ -0.56
SNX13-212ENST00000498463 DDR2Q16832 855 aa11.58□□□□□ -0.56
SNX13-212ENST00000498463 NCAPG2Q86XI2 1143 aa11.58□□□□□ -0.56
SNX13-212ENST00000498463 RPUSD2Q8IZ73 545 aaKnown RBP11.58□□□□□ -0.56
SNX13-212ENST00000498463 HPS1Q92902 700 aa11.58□□□□□ -0.56
SNX13-212ENST00000498463 NECAB3Q96P71 396 aaPredicted RBP11.58□□□□□ -0.56
SNX13-212ENST00000498463 LRRC3Q9BY71 257 aa11.58□□□□□ -0.56
SNX13-212ENST00000498463 TOR4AQ9NXH8 423 aa11.58□□□□□ -0.56
SNX13-212ENST00000498463 BMP2P12643 396 aa11.57□□□□□ -0.56
SNX13-212ENST00000498463 ITPKAP23677 461 aa11.57□□□□□ -0.56
SNX13-212ENST00000498463 EIF6P56537 245 aaKnown RBP11.57□□□□□ -0.56
SNX13-212ENST00000498463 RPS26P62854 115 aaKnown RBP11.57□□□□□ -0.56
SNX13-212ENST00000498463 NLRP8Q86W28 1048 aa11.57□□□□□ -0.56
SNX13-212ENST00000498463 FBXO27Q8NI29 283 aa11.57□□□□□ -0.56
SNX13-212ENST00000498463 TRPM4Q8TD43 1214 aa11.57□□□□□ -0.56
SNX13-212ENST00000498463 GSX2Q9BZM3 304 aa11.57□□□□□ -0.56
SNX13-212ENST00000498463 DZANK1Q9NVP4 752 aa11.57□□□□□ -0.56
SNX13-212ENST00000498463 ZFATQ9P243 1243 aa11.57□□□□□ -0.56
SNX13-212ENST00000498463 ROBO2Q9HCK4 1378 aa11.56□□□□□ -0.56
SNX13-212ENST00000498463 ESYT3A0FGR9 886 aa11.56□□□□□ -0.56
SNX13-212ENST00000498463 TLR3O15455 904 aaKnown RBP11.56□□□□□ -0.56
SNX13-212ENST00000498463 KIF4AO95239 1232 aa11.56□□□□□ -0.56
SNX13-212ENST00000498463 IFRD2Q12894 506 aaPredicted RBP11.56□□□□□ -0.56
SNX13-212ENST00000498463 COL13A1Q5TAT6 717 aaPredicted RBP11.56□□□□□ -0.56
SNX13-212ENST00000498463 HOMER1Q86YM7 354 aa11.56□□□□□ -0.56
SNX13-212ENST00000498463 TRIM42Q8IWZ5 723 aa11.56□□□□□ -0.56
SNX13-212ENST00000498463 TMX1Q9H3N1 280 aa11.56□□□□□ -0.56
SNX13-212ENST00000498463 ACTR10Q9NZ32 417 aa11.56□□□□□ -0.56
SNX13-212ENST00000498463 METTL12A8MUP2 240 aa11.55□□□□□ -0.56
SNX13-212ENST00000498463 TNFRSF10AO00220 468 aa11.55□□□□□ -0.56
SNX13-212ENST00000498463 PAGE1O75459 146 aa11.55□□□□□ -0.56
SNX13-212ENST00000498463 F13A1P00488 732 aa11.55□□□□□ -0.56
SNX13-212ENST00000498463 GIPRP48546 466 aa11.55□□□□□ -0.56
SNX13-212ENST00000498463 SPRED3Q2MJR0 410 aa11.55□□□□□ -0.56
SNX13-212ENST00000498463 C6orf118Q5T5N4 469 aa11.55□□□□□ -0.56
SNX13-212ENST00000498463 BNC2Q6ZN30 1099 aaPredicted RBP11.55□□□□□ -0.56
SNX13-212ENST00000498463 KIAA0907Q7Z7F0 614 aaPredicted RBP11.55□□□□□ -0.56
SNX13-212ENST00000498463 CDAN1Q8IWY9 1227 aa11.55□□□□□ -0.56
SNX13-212ENST00000498463 PGBD3Q8N328 593 aa11.55□□□□□ -0.56
SNX13-212ENST00000498463 FERD3LQ96RJ6 166 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms