RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 RASSF4Q9H2L5 321 aa8.52□□□□□ -1.05
SSR3-209ENST00000498205 PDE2AO00408 941 aaPredicted RBP8.51□□□□□ -1.05
SSR3-209ENST00000498205 EIF1AYO14602 144 aaKnown RBP8.51□□□□□ -1.05
SSR3-209ENST00000498205 CABP4P57796 275 aa8.51□□□□□ -1.05
SSR3-209ENST00000498205 DSC3Q14574 896 aa8.51□□□□□ -1.05
SSR3-209ENST00000498205 ILDR2Q71H61 639 aa8.51□□□□□ -1.05
SSR3-209ENST00000498205 OSMRQ99650 979 aa8.51□□□□□ -1.05
SSR3-209ENST00000498205 ADAM19Q9H013 955 aa8.51□□□□□ -1.05
SSR3-209ENST00000498205 A0A0A0MRY4 1105 aa8.5□□□□□ -1.05
SSR3-209ENST00000498205 ELNP15502 786 aa8.5□□□□□ -1.05
SSR3-209ENST00000498205 CDC27P30260 824 aa8.5□□□□□ -1.05
SSR3-209ENST00000498205 ATP11AP98196 1134 aa8.5□□□□□ -1.05
SSR3-209ENST00000498205 ORC1Q13415 861 aa8.5□□□□□ -1.05
SSR3-209ENST00000498205 FAM117BQ6P1L5 589 aa8.5□□□□□ -1.05
SSR3-209ENST00000498205 DMRTC2Q8IXT2 367 aaPredicted RBP8.5□□□□□ -1.05
SSR3-209ENST00000498205 IL22RA1Q8N6P7 574 aa8.5□□□□□ -1.05
SSR3-209ENST00000498205 FBF1Q8TES7 1133 aa8.5□□□□□ -1.05
SSR3-209ENST00000498205 DCAF5Q96JK2 942 aa8.5□□□□□ -1.05
SSR3-209ENST00000498205 SUV39H2Q9H5I1 410 aa8.5□□□□□ -1.05
SSR3-209ENST00000498205 PPME1Q9Y570 386 aa8.5□□□□□ -1.05
SSR3-209ENST00000498205 APBA3O96018 575 aa8.49□□□□□ -1.05
SSR3-209ENST00000498205 COL8A1P27658 744 aa8.49□□□□□ -1.05
SSR3-209ENST00000498205 ATP2B2Q01814 1243 aa8.49□□□□□ -1.05
SSR3-209ENST00000498205 FMR1Q06787 632 aaKnown RBP eCLIP8.49□□□□□ -1.05
SSR3-209ENST00000498205 CCDC27Q2M243 656 aa8.49□□□□□ -1.05
SSR3-209ENST00000498205 KIAA0319Q5VV43 1072 aa8.49□□□□□ -1.05
SSR3-209ENST00000498205 WNT8BQ93098 351 aa8.49□□□□□ -1.05
SSR3-209ENST00000498205 ZKSCAN3Q9BRR0 538 aa8.49□□□□□ -1.05
SSR3-209ENST00000498205 BHLHE41Q9C0J9 482 aaPredicted RBP8.49□□□□□ -1.05
SSR3-209ENST00000498205 GZF1Q9H116 711 aaPredicted RBP8.49□□□□□ -1.05
SSR3-209ENST00000498205 TRIM33Q9UPN9 1127 aa8.49□□□□□ -1.05
SSR3-209ENST00000498205 NFKBIEO00221 500 aa8.48□□□□□ -1.05
SSR3-209ENST00000498205 GSK3AP49840 483 aa8.48□□□□□ -1.05
SSR3-209ENST00000498205 ALG1LQ6GMV1 187 aa8.48□□□□□ -1.05
SSR3-209ENST00000498205 FMR1NBQ8N0W7 255 aaPredicted RBP8.48□□□□□ -1.05
SSR3-209ENST00000498205 NXPE3Q969Y0 559 aa8.48□□□□□ -1.05
SSR3-209ENST00000498205 CCDC74AQ96AQ1 378 aa8.48□□□□□ -1.05
SSR3-209ENST00000498205 POP1Q99575 1024 aaKnown RBP8.48□□□□□ -1.05
SSR3-209ENST00000498205 NLRP2Q9NX02 1062 aa8.48□□□□□ -1.05
SSR3-209ENST00000498205 PPP4R2Q9NY27 417 aa8.48□□□□□ -1.05
SSR3-209ENST00000498205 TRAK1Q9UPV9 953 aa8.48□□□□□ -1.05
SSR3-209ENST00000498205 ENOX2Q16206 610 aaKnown RBP8.47□□□□□ -1.05
SSR3-209ENST00000498205 PEAR1Q5VY43 1037 aaPredicted RBP8.47□□□□□ -1.05
SSR3-209ENST00000498205 FBXO11Q86XK2 927 aa8.47□□□□□ -1.05
SSR3-209ENST00000498205 BSNDQ8WZ55 320 aa8.47□□□□□ -1.05
SSR3-209ENST00000498205 ZFYVE1Q9HBF4 777 aa8.47□□□□□ -1.05
SSR3-209ENST00000498205 C9orf172C9J069 976 aa8.46□□□□□ -1.06
SSR3-209ENST00000498205 BAG6P46379 1132 aa8.46□□□□□ -1.06
SSR3-209ENST00000498205 NRG1Q02297 640 aaPredicted RBP8.46□□□□□ -1.06
SSR3-209ENST00000498205 KLHL23Q8NBE8 558 aa8.46□□□□□ -1.06
SSR3-209ENST00000498205 LIN7BQ9HAP6 207 aa8.46□□□□□ -1.06
SSR3-209ENST00000498205 NPHS2Q9NP85 383 aa8.46□□□□□ -1.06
SSR3-209ENST00000498205 A0A1W2PP55 124 aa8.45□□□□□ -1.06
SSR3-209ENST00000498205 H3BRJ5 948 aa8.45□□□□□ -1.06
SSR3-209ENST00000498205 IGHA1P01876 353 aa8.45□□□□□ -1.06
SSR3-209ENST00000498205 ARL4DP49703 201 aa8.45□□□□□ -1.06
SSR3-209ENST00000498205 PIP4K2BP78356 416 aa8.45□□□□□ -1.06
SSR3-209ENST00000498205 IGF2-ASQ6U949 168 aa8.45□□□□□ -1.06
SSR3-209ENST00000498205 CCNJLQ8IV13 435 aa8.45□□□□□ -1.06
SSR3-209ENST00000498205 LACRTQ9GZZ8 138 aa8.45□□□□□ -1.06
SSR3-209ENST00000498205 EHD4Q9H223 541 aa8.45□□□□□ -1.06
SSR3-209ENST00000498205 PNMA6FA0A0J9YX94 578 aa8.44□□□□□ -1.06
SSR3-209ENST00000498205 GIPC1O14908 333 aa8.44□□□□□ -1.06
SSR3-209ENST00000498205 GADD45BO75293 160 aaPredicted RBP8.44□□□□□ -1.06
SSR3-209ENST00000498205 POLR3DP05423 398 aaPredicted RBP8.44□□□□□ -1.06
SSR3-209ENST00000498205 MAPK8P45983 427 aa8.44□□□□□ -1.06
SSR3-209ENST00000498205 PTPN12Q05209 780 aaKnown RBP8.44□□□□□ -1.06
SSR3-209ENST00000498205 USPL1Q5W0Q7 1092 aa8.44□□□□□ -1.06
SSR3-209ENST00000498205 FRMD6Q96NE9 622 aa8.44□□□□□ -1.06
SSR3-209ENST00000498205 SRCIN1Q9C0H9 1055 aa8.44□□□□□ -1.06
SSR3-209ENST00000498205 OSGEPQ9NPF4 335 aa8.44□□□□□ -1.06
SSR3-209ENST00000498205 SOX13Q9UN79 622 aa8.44□□□□□ -1.06
SSR3-209ENST00000498205 ACPPP15309 386 aa8.43□□□□□ -1.06
SSR3-209ENST00000498205 PRPF40BQ6NWY9 871 aaKnown RBP8.43□□□□□ -1.06
SSR3-209ENST00000498205 ASAP3Q8TDY4 903 aa8.43□□□□□ -1.06
SSR3-209ENST00000498205 LENG1Q96BZ8 264 aaPredicted RBP8.43□□□□□ -1.06
SSR3-209ENST00000498205 LATS2Q9NRM7 1088 aa8.43□□□□□ -1.06
SSR3-209ENST00000498205 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.43□□□□□ -1.06
SSR3-209ENST00000498205 KRBA1A5PL33 1030 aa8.42□□□□□ -1.06
SSR3-209ENST00000498205 ANKRD33BA6NCL7 494 aa8.42□□□□□ -1.06
SSR3-209ENST00000498205 XRCC5P13010 732 aaKnown RBP8.42□□□□□ -1.06
SSR3-209ENST00000498205 ITGAEP38570 1179 aa8.42□□□□□ -1.06
SSR3-209ENST00000498205 SETDB1Q15047 1291 aa8.42□□□□□ -1.06
SSR3-209ENST00000498205 TMCO4Q5TGY1 634 aa8.42□□□□□ -1.06
SSR3-209ENST00000498205 SOX17Q9H6I2 414 aaPredicted RBP8.42□□□□□ -1.06
SSR3-209ENST00000498205 SEC31BQ9NQW1 1179 aa8.42□□□□□ -1.06
SSR3-209ENST00000498205 A0A096LPE4 126 aa8.41□□□□□ -1.06
SSR3-209ENST00000498205 A0A1W2PPZ6 126 aa8.41□□□□□ -1.06
SSR3-209ENST00000498205 LINC01387J3KSC0 135 aa8.41□□□□□ -1.06
SSR3-209ENST00000498205 FSCN2O14926 492 aa8.41□□□□□ -1.06
SSR3-209ENST00000498205 EPHA1P21709 976 aa8.41□□□□□ -1.06
SSR3-209ENST00000498205 EAPPQ56P03 285 aaPredicted RBP8.41□□□□□ -1.06
SSR3-209ENST00000498205 DDX54Q8TDD1 881 aaKnown RBP8.41□□□□□ -1.06
SSR3-209ENST00000498205 TCF12Q99081 682 aa8.41□□□□□ -1.06
SSR3-209ENST00000498205 MRPL18Q9H0U6 180 aaKnown RBP8.41□□□□□ -1.06
SSR3-209ENST00000498205 SPG7Q9UQ90 795 aa8.41□□□□□ -1.06
SSR3-209ENST00000498205 FAM229AH3BQW9 127 aa8.4□□□□□ -1.06
SSR3-209ENST00000498205 DLL1O00548 723 aa8.4□□□□□ -1.06
SSR3-209ENST00000498205 TRPA1O75762 1119 aa8.4□□□□□ -1.06
SSR3-209ENST00000498205 ITPKAP23677 461 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms