RNA–Protein interactions for RNA: ENST00000498124.1

CDKN2A-208, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 880 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-208ENST00000498124 ITGA6P23229 1130 aa28.77■■■□□ 2.2
CDKN2A-208ENST00000498124 A0A1B0GUL6 1792 aa28.77■■■□□ 2.2
CDKN2A-208ENST00000498124 USP17L3A6NCW0 530 aa28.76■■■□□ 2.19
CDKN2A-208ENST00000498124 USP17L4A6NCW7 530 aa28.76■■■□□ 2.19
CDKN2A-208ENST00000498124 F6X3S4 739 aa28.76■■■□□ 2.19
CDKN2A-208ENST00000498124 USP17L1Q7RTZ2 530 aa28.76■■■□□ 2.19
CDKN2A-208ENST00000498124 TXNRD3Q86VQ6 643 aa28.76■■■□□ 2.19
CDKN2A-208ENST00000498124 DCPSQ96C86 337 aaKnown RBP28.76■■■□□ 2.19
CDKN2A-208ENST00000498124 IGHMBP2P38935 993 aaKnown RBP28.75■■■□□ 2.19
CDKN2A-208ENST00000498124 KLRK1P26718 216 aa28.74■■■□□ 2.19
CDKN2A-208ENST00000498124 HUNKP57058 714 aa28.74■■■□□ 2.19
CDKN2A-208ENST00000498124 BEND3Q5T5X7 828 aa28.74■■■□□ 2.19
CDKN2A-208ENST00000498124 USP17L8P0C7I0 530 aa28.73■■■□□ 2.19
CDKN2A-208ENST00000498124 DACT2Q5SW24 774 aa28.73■■■□□ 2.19
CDKN2A-208ENST00000498124 ZIC5Q96T25 663 aa28.73■■■□□ 2.19
CDKN2A-208ENST00000498124 MXD3Q9BW11 206 aa28.73■■■□□ 2.19
CDKN2A-208ENST00000498124 GBA2Q9HCG7 927 aaPredicted RBP28.73■■■□□ 2.19
CDKN2A-208ENST00000498124 ZNF521Q96K83 1311 aa28.72■■■□□ 2.19
CDKN2A-208ENST00000498124 FOXO4P98177 505 aa28.72■■■□□ 2.19
CDKN2A-208ENST00000498124 SCARF1Q14162 830 aa28.72■■■□□ 2.19
CDKN2A-208ENST00000498124 MYOZ2Q9NPC6 264 aa28.72■■■□□ 2.19
CDKN2A-208ENST00000498124 LEMD3Q9Y2U8 911 aa28.72■■■□□ 2.19
CDKN2A-208ENST00000498124 BRPF1P55201 1214 aaPredicted RBP28.71■■■□□ 2.19
CDKN2A-208ENST00000498124 ANGEL2Q5VTE6 544 aaKnown RBP28.71■■■□□ 2.19
CDKN2A-208ENST00000498124 SULF1Q8IWU6 871 aa28.71■■■□□ 2.19
CDKN2A-208ENST00000498124 BEGAINQ9BUH8 593 aa28.71■■■□□ 2.19
CDKN2A-208ENST00000498124 TSKSQ9UJT2 592 aa28.71■■■□□ 2.19
CDKN2A-208ENST00000498124 ZNF804BA4D1E1 1349 aa28.7■■■□□ 2.19
CDKN2A-208ENST00000498124 CDCA5Q96FF9 252 aa28.7■■■□□ 2.18
CDKN2A-208ENST00000498124 COA1Q9GZY4 146 aa28.7■■■□□ 2.18
CDKN2A-208ENST00000498124 IRS2Q9Y4H2 1338 aa28.69■■■□□ 2.18
CDKN2A-208ENST00000498124 FAM155AB1AL88 458 aaPredicted RBP28.69■■■□□ 2.18
CDKN2A-208ENST00000498124 MPHOSPH8Q99549 860 aa28.69■■■□□ 2.18
CDKN2A-208ENST00000498124 ANKRD2Q9GZV1 360 aa28.69■■■□□ 2.18
CDKN2A-208ENST00000498124 CHRNDQ07001 517 aa28.68■■■□□ 2.18
CDKN2A-208ENST00000498124 NOGQ13253 232 aa28.68■■■□□ 2.18
CDKN2A-208ENST00000498124 EPHA10Q5JZY3 1008 aa28.68■■■□□ 2.18
CDKN2A-208ENST00000498124 PITPNM2Q9BZ72 1349 aa28.68■■■□□ 2.18
CDKN2A-208ENST00000498124 STRIP1Q5VSL9 837 aa28.67■■■□□ 2.18
CDKN2A-208ENST00000498124 RGMBQ6NW40 437 aa28.67■■■□□ 2.18
CDKN2A-208ENST00000498124 C2orf69Q8N8R5 385 aa28.67■■■□□ 2.18
CDKN2A-208ENST00000498124 ANKRD18BA2A2Z9 1011 aa28.66■■■□□ 2.18
CDKN2A-208ENST00000498124 SNAP23O00161 211 aa28.65■■■□□ 2.18
CDKN2A-208ENST00000498124 PAPPA2Q9BXP8 1791 aa28.65■■■□□ 2.18
CDKN2A-208ENST00000498124 GRM8O00222 908 aa28.64■■■□□ 2.18
CDKN2A-208ENST00000498124 CA12O43570 354 aa28.64■■■□□ 2.18
CDKN2A-208ENST00000498124 NBPF9Q3BBW0 867 aa28.64■■■□□ 2.18
CDKN2A-208ENST00000498124 FBXW7Q969H0 707 aa28.64■■■□□ 2.18
CDKN2A-208ENST00000498124 SCAF8Q9UPN6 1271 aaKnown RBP28.64■■■□□ 2.18
CDKN2A-208ENST00000498124 MYO3BQ8WXR4 1341 aa28.64■■■□□ 2.17
CDKN2A-208ENST00000498124 IFIT5Q13325 482 aaKnown RBP28.63■■■□□ 2.17
CDKN2A-208ENST00000498124 TAF5LO75529 589 aa28.62■■■□□ 2.17
CDKN2A-208ENST00000498124 LMBR1LQ6UX01 489 aa28.62■■■□□ 2.17
CDKN2A-208ENST00000498124 C15orf52Q6ZUT6 534 aaKnown RBP28.61■■■□□ 2.17
CDKN2A-208ENST00000498124 HELBQ8NG08 1087 aaPredicted RBP28.61■■■□□ 2.17
CDKN2A-208ENST00000498124 CHMP3Q9Y3E7 222 aa28.61■■■□□ 2.17
CDKN2A-208ENST00000498124 WNT10BO00744 389 aa28.6■■■□□ 2.17
CDKN2A-208ENST00000498124 ALDH1L1O75891 902 aa28.6■■■□□ 2.17
CDKN2A-208ENST00000498124 SLC10A3P09131 477 aa28.6■■■□□ 2.17
CDKN2A-208ENST00000498124 KCNJ4P48050 445 aa28.6■■■□□ 2.17
CDKN2A-208ENST00000498124 ZNF157P51786 506 aaPredicted RBP28.6■■■□□ 2.17
CDKN2A-208ENST00000498124 TTLL5Q6EMB2 1281 aa28.6■■■□□ 2.17
CDKN2A-208ENST00000498124 CCDC102AQ96A19 550 aa28.6■■■□□ 2.17
CDKN2A-208ENST00000498124 ABHD8Q96I13 439 aa28.6■■■□□ 2.17
CDKN2A-208ENST00000498124 CD209Q9NNX6 404 aa28.6■■■□□ 2.17
CDKN2A-208ENST00000498124 GTF2IP78347 998 aa28.59■■■□□ 2.17
CDKN2A-208ENST00000498124 ZNF594Q96JF6 807 aaPredicted RBP28.59■■■□□ 2.17
CDKN2A-208ENST00000498124 SASH1O94885 1247 aa28.58■■■□□ 2.17
CDKN2A-208ENST00000498124 KIF23Q02241 960 aaPredicted RBP28.58■■■□□ 2.17
CDKN2A-208ENST00000498124 OGFOD1Q8N543 542 aa28.58■■■□□ 2.17
CDKN2A-208ENST00000498124 KAZALD1Q96I82 304 aa28.58■■■□□ 2.17
CDKN2A-208ENST00000498124 ZBED3Q96IU2 234 aaPredicted RBP28.58■■■□□ 2.17
CDKN2A-208ENST00000498124 CASP8AP2Q9UKL3 1982 aa28.58■■■□□ 2.17
CDKN2A-208ENST00000498124 SLC4A10Q6U841 1118 aa28.57■■■□□ 2.16
CDKN2A-208ENST00000498124 KIAA0825Q8IV33 1275 aa28.57■■■□□ 2.16
CDKN2A-208ENST00000498124 CERS5Q8N5B7 392 aa28.57■■■□□ 2.16
CDKN2A-208ENST00000498124 SRCIN1Q9C0H9 1055 aa28.57■■■□□ 2.16
CDKN2A-208ENST00000498124 FKBP1BP68106 108 aa28.56■■■□□ 2.16
CDKN2A-208ENST00000498124 PRAMEF18Q5VWM3 479 aa28.56■■■□□ 2.16
CDKN2A-208ENST00000498124 MOB2Q70IA6 237 aa28.56■■■□□ 2.16
CDKN2A-208ENST00000498124 RASAL3Q86YV0 1011 aa28.56■■■□□ 2.16
CDKN2A-208ENST00000498124 C9orf78Q9NZ63 289 aaPredicted RBP28.56■■■□□ 2.16
CDKN2A-208ENST00000498124 MMP14P50281 582 aa28.55■■■□□ 2.16
CDKN2A-208ENST00000498124 SUCLG2Q96I99 432 aa28.55■■■□□ 2.16
CDKN2A-208ENST00000498124 UTYO14607 1347 aa28.54■■■□□ 2.16
CDKN2A-208ENST00000498124 CCDC57Q2TAC2 916 aa28.54■■■□□ 2.16
CDKN2A-208ENST00000498124 MRPL50Q8N5N7 158 aaKnown RBP28.54■■■□□ 2.16
CDKN2A-208ENST00000498124 NBPF7P0C2Y1 421 aaPredicted RBP28.53■■■□□ 2.16
CDKN2A-208ENST00000498124 IL1R1P14778 569 aa28.53■■■□□ 2.16
CDKN2A-208ENST00000498124 LDHAL6AQ6ZMR3 332 aa28.52■■■□□ 2.16
CDKN2A-208ENST00000498124 SAGE1Q9NXZ1 904 aa28.52■■■□□ 2.16
CDKN2A-208ENST00000498124 HNRNPUQ00839 825 aaKnown RBP eCLIP28.51■■■□□ 2.15
CDKN2A-208ENST00000498124 CSRNP1Q96S65 589 aa28.51■■■□□ 2.15
CDKN2A-208ENST00000498124 HDAC9Q9UKV0 1011 aa28.51■■■□□ 2.15
CDKN2A-208ENST00000498124 AKAP11Q9UKA4 1901 aa28.5■■■□□ 2.15
CDKN2A-208ENST00000498124 TAF7LQ5H9L4 462 aa28.5■■■□□ 2.15
CDKN2A-208ENST00000498124 ZNF804AQ7Z570 1209 aa28.5■■■□□ 2.15
CDKN2A-208ENST00000498124 CNNM1Q9NRU3 951 aa28.5■■■□□ 2.15
CDKN2A-208ENST00000498124 ECM29Q5VYK3 1845 aa28.5■■■□□ 2.15
CDKN2A-208ENST00000498124 E9PSI1 815 aa28.49■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 141.8 ms