RNA–Protein interactions for RNA: ENST00000498035.5

HM13-224, Transcript of histocompatibility minor 13, human

TSL 2 BASIC

Gene HM13, Length 3,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HM13-224	ENST00000498035	SNX32	Q86XE0	403 aa		10.23	□□□□□ -0.77
HM13-224	ENST00000498035	NDUFAF2	Q8N183	169 aa		10.23	□□□□□ -0.77
HM13-224	ENST00000498035	KLHL23	Q8NBE8	558 aa		10.23	□□□□□ -0.77
HM13-224	ENST00000498035	TRIM11	Q96F44	468 aa		10.23	□□□□□ -0.77
HM13-224	ENST00000498035		V9GYY5	206 aa	Predicted RBP	10.23	□□□□□ -0.77
HM13-224	ENST00000498035	PTPRC	P08575	1304 aa		10.23	□□□□□ -0.77
HM13-224	ENST00000498035	CEP152	O94986	1710 aa		10.23	□□□□□ -0.77
HM13-224	ENST00000498035	KLHL33	A6NCF5	533 aa		10.23	□□□□□ -0.77
HM13-224	ENST00000498035	PABPN1L	A6NDY0	278 aa	Known RBP	10.23	□□□□□ -0.77
HM13-224	ENST00000498035	GOLGA6L4	A6NEF3	574 aa		10.23	□□□□□ -0.77
HM13-224	ENST00000498035	SLMAP	Q14BN4	828 aa		10.23	□□□□□ -0.77
HM13-224	ENST00000498035	LMNTD2	Q8IXW0	634 aa		10.23	□□□□□ -0.77
HM13-224	ENST00000498035	VRTN	Q9H8Y1	702 aa		10.23	□□□□□ -0.77
HM13-224	ENST00000498035	IL1RAPL2	Q9NP60	686 aa		10.23	□□□□□ -0.77
HM13-224	ENST00000498035	SUN2	Q9UH99	717 aa		10.23	□□□□□ -0.77
HM13-224	ENST00000498035	PRSS47	A8MTI9	375 aa		10.23	□□□□□ -0.77
HM13-224	ENST00000498035	ERC2	O15083	957 aa		10.23	□□□□□ -0.77
HM13-224	ENST00000498035	ZSCAN20	P17040	1043 aa	Predicted RBP	10.23	□□□□□ -0.77
HM13-224	ENST00000498035	CABP4	P57796	275 aa		10.23	□□□□□ -0.77
HM13-224	ENST00000498035	FXN	Q16595	210 aa		10.23	□□□□□ -0.77
HM13-224	ENST00000498035	CCDC89	Q8N998	374 aa		10.23	□□□□□ -0.77
HM13-224	ENST00000498035	DDX54	Q8TDD1	881 aa	Known RBP	10.23	□□□□□ -0.77
HM13-224	ENST00000498035	TRIM6	Q9C030	488 aa	Predicted RBP	10.23	□□□□□ -0.77
HM13-224	ENST00000498035	PRKAG2	Q9UGJ0	569 aa		10.23	□□□□□ -0.77
HM13-224	ENST00000498035	UST	Q9Y2C2	406 aa		10.23	□□□□□ -0.77
HM13-224	ENST00000498035	IFT172	Q9UG01	1749 aa		10.23	□□□□□ -0.77
HM13-224	ENST00000498035	C8orf34	Q49A92	452 aa		10.22	□□□□□ -0.77
HM13-224	ENST00000498035	CCDC73	Q6ZRK6	1079 aa		10.22	□□□□□ -0.77
HM13-224	ENST00000498035	KIF2C	Q99661	725 aa		10.22	□□□□□ -0.77
HM13-224	ENST00000498035	MKS1	Q9NXB0	559 aa		10.22	□□□□□ -0.77
HM13-224	ENST00000498035	ADGRB3	O60242	1522 aa		10.22	□□□□□ -0.77
HM13-224	ENST00000498035	LMTK2	Q8IWU2	1503 aa		10.22	□□□□□ -0.77
HM13-224	ENST00000498035	PPRC1	Q5VV67	1664 aa	Known RBP	10.22	□□□□□ -0.77
HM13-224	ENST00000498035	MTA2	O94776	668 aa		10.22	□□□□□ -0.77
HM13-224	ENST00000498035	NEFH	P12036	1026 aa		10.22	□□□□□ -0.77
HM13-224	ENST00000498035	MSL1	Q68DK7	614 aa		10.22	□□□□□ -0.77
HM13-224	ENST00000498035	GPIHBP1	Q8IV16	184 aa		10.22	□□□□□ -0.77
HM13-224	ENST00000498035	GLMN	Q92990	594 aa		10.22	□□□□□ -0.77
HM13-224	ENST00000498035	KDM2B	Q8NHM5	1336 aa		10.22	□□□□□ -0.77
HM13-224	ENST00000498035	KIDINS220	Q9ULH0	1771 aa		10.22	□□□□□ -0.77
HM13-224	ENST00000498035	PPP2R5A	Q15172	486 aa		10.22	□□□□□ -0.77
HM13-224	ENST00000498035	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	10.22	□□□□□ -0.77
HM13-224	ENST00000498035	RNF187	Q5TA31	235 aa	Predicted RBP	10.22	□□□□□ -0.77
HM13-224	ENST00000498035	HELQ	Q8TDG4	1101 aa		10.22	□□□□□ -0.77
HM13-224	ENST00000498035	ZBTB40	Q9NUA8	1239 aa		10.22	□□□□□ -0.77
HM13-224	ENST00000498035	RBP3	P10745	1247 aa		10.21	□□□□□ -0.77
HM13-224	ENST00000498035	CHST12	Q9NRB3	414 aa		10.21	□□□□□ -0.77
HM13-224	ENST00000498035	ABCA6	Q8N139	1617 aa		10.21	□□□□□ -0.77
HM13-224	ENST00000498035	CLCN1	P35523	988 aa		10.21	□□□□□ -0.78
HM13-224	ENST00000498035	ANKRD24	Q8TF21	1146 aa		10.21	□□□□□ -0.78
HM13-224	ENST00000498035	PBXIP1	Q96AQ6	731 aa		10.21	□□□□□ -0.78
HM13-224	ENST00000498035	PLEKHF1	Q96S99	279 aa		10.21	□□□□□ -0.78
HM13-224	ENST00000498035	MEIS3	Q99687	375 aa		10.21	□□□□□ -0.78
HM13-224	ENST00000498035	DDX56	Q9NY93	547 aa	Known RBP	10.21	□□□□□ -0.78
HM13-224	ENST00000498035	LZTS1	Q9Y250	596 aa		10.21	□□□□□ -0.78
HM13-224	ENST00000498035	DNAJA1	P31689	397 aa	Known RBP	10.21	□□□□□ -0.78
HM13-224	ENST00000498035	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	10.21	□□□□□ -0.78
HM13-224	ENST00000498035	SMCR8	Q8TEV9	937 aa	Predicted RBP	10.21	□□□□□ -0.78
HM13-224	ENST00000498035	PDGFD	Q9GZP0	370 aa	Predicted RBP	10.21	□□□□□ -0.78
HM13-224	ENST00000498035	UTP6	Q9NYH9	597 aa	Known RBP	10.21	□□□□□ -0.78
HM13-224	ENST00000498035	TTF2	Q9UNY4	1162 aa	Known RBP	10.21	□□□□□ -0.78
HM13-224	ENST00000498035	ZKSCAN1	P17029	563 aa	Predicted RBP	10.2	□□□□□ -0.78
HM13-224	ENST00000498035	SLC26A4	O43511	780 aa		10.2	□□□□□ -0.78
HM13-224	ENST00000498035	HOXC9	P31274	260 aa		10.2	□□□□□ -0.78
HM13-224	ENST00000498035	CA8	P35219	290 aa		10.2	□□□□□ -0.78
HM13-224	ENST00000498035	LRRC59	Q96AG4	307 aa	Known RBP	10.2	□□□□□ -0.78
HM13-224	ENST00000498035	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	10.2	□□□□□ -0.78
HM13-224	ENST00000498035	ROBO2	Q9HCK4	1378 aa		10.2	□□□□□ -0.78
HM13-224	ENST00000498035	ANXA1	P04083	346 aa		10.2	□□□□□ -0.78
HM13-224	ENST00000498035	NEK4	P51957	841 aa		10.2	□□□□□ -0.78
HM13-224	ENST00000498035	CHAF1A	Q13111	956 aa	Predicted RBP	10.2	□□□□□ -0.78
HM13-224	ENST00000498035	KIAA1958	Q8N8K9	716 aa		10.2	□□□□□ -0.78
HM13-224	ENST00000498035	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	10.2	□□□□□ -0.78
HM13-224	ENST00000498035	A2ML1	A8K2U0	1454 aa		10.2	□□□□□ -0.78
HM13-224	ENST00000498035	RNASEH2A	O75792	299 aa	Known RBP	10.19	□□□□□ -0.78
HM13-224	ENST00000498035	NUCB1	Q02818	461 aa		10.19	□□□□□ -0.78
HM13-224	ENST00000498035	CNTROB	Q8N137	903 aa		10.19	□□□□□ -0.78
HM13-224	ENST00000498035	LRRFIP2	Q9Y608	721 aa	Known RBP	10.19	□□□□□ -0.78
HM13-224	ENST00000498035	PRR36	Q9H6K5	1346 aa		10.19	□□□□□ -0.78
HM13-224	ENST00000498035	GC	P02774	474 aa		10.19	□□□□□ -0.78
HM13-224	ENST00000498035	RABEP1	Q15276	862 aa		10.19	□□□□□ -0.78
HM13-224	ENST00000498035	CHRNA2	Q15822	529 aa		10.19	□□□□□ -0.78
HM13-224	ENST00000498035	PRPF38A	Q8NAV1	312 aa	Known RBP	10.19	□□□□□ -0.78
HM13-224	ENST00000498035	SIL1	Q9H173	461 aa		10.19	□□□□□ -0.78
HM13-224	ENST00000498035	IKBKG	Q9Y6K9	419 aa		10.19	□□□□□ -0.78
HM13-224	ENST00000498035	CLK1	P49759	484 aa	Known RBP	10.19	□□□□□ -0.78
HM13-224	ENST00000498035	EIF5	P55010	431 aa	Known RBP	10.19	□□□□□ -0.78
HM13-224	ENST00000498035	ZRSR1	Q15695	479 aa	Known RBP	10.19	□□□□□ -0.78
HM13-224	ENST00000498035	HSP90B2P	Q58FF3	399 aa		10.19	□□□□□ -0.78
HM13-224	ENST00000498035	BMP2KL	Q5H9B9	411 aa		10.19	□□□□□ -0.78
HM13-224	ENST00000498035	ORAI2	Q96SN7	254 aa		10.19	□□□□□ -0.78
HM13-224	ENST00000498035	DNAAF4	Q8WXU2	420 aa		10.18	□□□□□ -0.78
HM13-224	ENST00000498035	FAM212A	Q96EL1	285 aa		10.18	□□□□□ -0.78
HM13-224	ENST00000498035	GDPD2	Q9HCC8	539 aa		10.18	□□□□□ -0.78
HM13-224	ENST00000498035	DBF4	Q9UBU7	674 aa	Predicted RBP	10.18	□□□□□ -0.78
HM13-224	ENST00000498035	RABGAP1	Q9Y3P9	1069 aa		10.18	□□□□□ -0.78
HM13-224	ENST00000498035	LAMC1	P11047	1609 aa		10.18	□□□□□ -0.78
HM13-224	ENST00000498035	GLI2	P10070	1586 aa		10.18	□□□□□ -0.78
HM13-224	ENST00000498035	DIP2C	Q9Y2E4	1556 aa		10.18	□□□□□ -0.78
HM13-224	ENST00000498035	ZNF132	P52740	706 aa		10.18	□□□□□ -0.78

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