RNA–Protein interactions for RNA: ENST00000498020.1

HLA-DMB-262, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 4,569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-262ENST00000498020 MST1RQ04912 1400 aa9.39□□□□□ -0.91
HLA-DMB-262ENST00000498020 SLC27A2O14975 620 aa9.39□□□□□ -0.91
HLA-DMB-262ENST00000498020 IMMTQ16891 758 aaKnown RBP9.39□□□□□ -0.91
HLA-DMB-262ENST00000498020 ERFEQ4G0M1 354 aa9.39□□□□□ -0.91
HLA-DMB-262ENST00000498020 TPM1P09493 284 aa9.38□□□□□ -0.91
HLA-DMB-262ENST00000498020 HCLS1P14317 486 aaPredicted RBP9.38□□□□□ -0.91
HLA-DMB-262ENST00000498020 USP5P45974 858 aa9.38□□□□□ -0.91
HLA-DMB-262ENST00000498020 TCIRG1Q13488 830 aa9.38□□□□□ -0.91
HLA-DMB-262ENST00000498020 TRIM29Q14134 588 aa9.38□□□□□ -0.91
HLA-DMB-262ENST00000498020 CLEC17AQ6ZS10 378 aa9.38□□□□□ -0.91
HLA-DMB-262ENST00000498020 UTP14AQ9BVJ6 771 aaKnown RBP9.38□□□□□ -0.91
HLA-DMB-262ENST00000498020 DLG5Q8TDM6 1919 aa9.38□□□□□ -0.91
HLA-DMB-262ENST00000498020 UTYO14607 1347 aa9.38□□□□□ -0.91
HLA-DMB-262ENST00000498020 KBTBD3Q8NAB2 608 aa9.38□□□□□ -0.91
HLA-DMB-262ENST00000498020 KCNQ2O43526 872 aa9.38□□□□□ -0.91
HLA-DMB-262ENST00000498020 POLR3DP05423 398 aaPredicted RBP9.38□□□□□ -0.91
HLA-DMB-262ENST00000498020 DDIT3P35638 169 aa9.38□□□□□ -0.91
HLA-DMB-262ENST00000498020 PTH1RQ03431 593 aa9.38□□□□□ -0.91
HLA-DMB-262ENST00000498020 DALRD3Q5D0E6 543 aaKnown RBP9.38□□□□□ -0.91
HLA-DMB-262ENST00000498020 TMEM87AQ8NBN3 555 aa9.38□□□□□ -0.91
HLA-DMB-262ENST00000498020 EYA3Q99504 573 aa9.38□□□□□ -0.91
HLA-DMB-262ENST00000498020 GDPD2Q9HCC8 539 aa9.38□□□□□ -0.91
HLA-DMB-262ENST00000498020 ERICH2A1L162 156 aa9.38□□□□□ -0.91
HLA-DMB-262ENST00000498020 FSD2A1L4K1 749 aa9.38□□□□□ -0.91
HLA-DMB-262ENST00000498020 F13A1P00488 732 aa9.38□□□□□ -0.91
HLA-DMB-262ENST00000498020 PDIA6Q15084 440 aa9.38□□□□□ -0.91
HLA-DMB-262ENST00000498020 CCDC152Q4G0S7 254 aa9.38□□□□□ -0.91
HLA-DMB-262ENST00000498020 CCDC183Q5T5S1 534 aa9.38□□□□□ -0.91
HLA-DMB-262ENST00000498020 RASEFQ8IZ41 740 aa9.38□□□□□ -0.91
HLA-DMB-262ENST00000498020 HELBQ8NG08 1087 aaPredicted RBP9.38□□□□□ -0.91
HLA-DMB-262ENST00000498020 PANK2Q9BZ23 570 aa9.38□□□□□ -0.91
HLA-DMB-262ENST00000498020 SCAND2PQ9GZW5 306 aaPredicted RBP9.38□□□□□ -0.91
HLA-DMB-262ENST00000498020 CPDO75976 1380 aa9.37□□□□□ -0.91
HLA-DMB-262ENST00000498020 ESPNB1AK53 854 aa9.37□□□□□ -0.91
HLA-DMB-262ENST00000498020 CPA1P15085 419 aa9.37□□□□□ -0.91
HLA-DMB-262ENST00000498020 SYT1P21579 422 aa9.37□□□□□ -0.91
HLA-DMB-262ENST00000498020 UBE2HP62256 183 aa9.37□□□□□ -0.91
HLA-DMB-262ENST00000498020 HMGN5P82970 282 aaKnown RBP9.37□□□□□ -0.91
HLA-DMB-262ENST00000498020 PTPN12Q05209 780 aaKnown RBP9.37□□□□□ -0.91
HLA-DMB-262ENST00000498020 USPL1Q5W0Q7 1092 aa9.37□□□□□ -0.91
HLA-DMB-262ENST00000498020 NECAB1Q8N987 351 aa9.37□□□□□ -0.91
HLA-DMB-262ENST00000498020 MAP4K1Q92918 833 aa9.37□□□□□ -0.91
HLA-DMB-262ENST00000498020 ZSWIM6Q9HCJ5 1215 aa9.37□□□□□ -0.91
HLA-DMB-262ENST00000498020 PRM3Q9NNZ6 103 aa9.37□□□□□ -0.91
HLA-DMB-262ENST00000498020 GPR108Q9NPR9 543 aa9.37□□□□□ -0.91
HLA-DMB-262ENST00000498020 HELLSQ9NRZ9 838 aa9.37□□□□□ -0.91
HLA-DMB-262ENST00000498020 TIMM10P62072 90 aa9.37□□□□□ -0.91
HLA-DMB-262ENST00000498020 PKP1Q13835 747 aa9.37□□□□□ -0.91
HLA-DMB-262ENST00000498020 LRSAM1Q6UWE0 723 aa9.37□□□□□ -0.91
HLA-DMB-262ENST00000498020 RBM27Q9P2N5 1060 aaKnown RBP9.37□□□□□ -0.91
HLA-DMB-262ENST00000498020 NFAT5O94916 1531 aa9.37□□□□□ -0.91
HLA-DMB-262ENST00000498020 NALCNQ8IZF0 1738 aa9.37□□□□□ -0.91
HLA-DMB-262ENST00000498020 GRIN3BO60391 1043 aa9.37□□□□□ -0.91
HLA-DMB-262ENST00000498020 TPM2P07951 284 aa9.37□□□□□ -0.91
HLA-DMB-262ENST00000498020 PDE4CQ08493 712 aa9.37□□□□□ -0.91
HLA-DMB-262ENST00000498020 ATP2B3Q16720 1220 aa9.37□□□□□ -0.91
HLA-DMB-262ENST00000498020 FERMT3Q86UX7 667 aa9.37□□□□□ -0.91
HLA-DMB-262ENST00000498020 CCDC47Q96A33 483 aaKnown RBP9.37□□□□□ -0.91
HLA-DMB-262ENST00000498020 ZNF396Q96N95 335 aaPredicted RBP9.37□□□□□ -0.91
HLA-DMB-262ENST00000498020 FBXO3Q9UK99 471 aa9.37□□□□□ -0.91
HLA-DMB-262ENST00000498020 PXDNQ92626 1479 aa9.37□□□□□ -0.91
HLA-DMB-262ENST00000498020 A0A1B0GUL7 405 aa9.36□□□□□ -0.91
HLA-DMB-262ENST00000498020 H7C1W4 665 aa9.36□□□□□ -0.91
HLA-DMB-262ENST00000498020 RPS6KB1P23443 525 aa9.36□□□□□ -0.91
HLA-DMB-262ENST00000498020 ZNF445P59923 1031 aa9.36□□□□□ -0.91
HLA-DMB-262ENST00000498020 USP48Q86UV5 1035 aa9.36□□□□□ -0.91
HLA-DMB-262ENST00000498020 CCDC39Q9UFE4 941 aa9.36□□□□□ -0.91
HLA-DMB-262ENST00000498020 DBNLQ9UJU6 430 aaKnown RBP9.36□□□□□ -0.91
HLA-DMB-262ENST00000498020 CFAP45Q9UL16 551 aa9.36□□□□□ -0.91
HLA-DMB-262ENST00000498020 ASAP1Q9ULH1 1129 aa9.36□□□□□ -0.91
HLA-DMB-262ENST00000498020 PLEKHG2Q9H7P9 1386 aa9.36□□□□□ -0.91
HLA-DMB-262ENST00000498020 A0A0D9SFI3 127 aa9.36□□□□□ -0.91
HLA-DMB-262ENST00000498020 RNF113AO15541 343 aaKnown RBP9.36□□□□□ -0.91
HLA-DMB-262ENST00000498020 TTF1Q15361 905 aaPredicted RBP9.36□□□□□ -0.91
HLA-DMB-262ENST00000498020 TMEM132AQ24JP5 1023 aa9.36□□□□□ -0.91
HLA-DMB-262ENST00000498020 EPHA10Q5JZY3 1008 aa9.36□□□□□ -0.91
HLA-DMB-262ENST00000498020 CCDC73Q6ZRK6 1079 aa9.36□□□□□ -0.91
HLA-DMB-262ENST00000498020 SPATA32Q96LK8 384 aa9.36□□□□□ -0.91
HLA-DMB-262ENST00000498020 HAUS7Q99871 368 aa9.36□□□□□ -0.91
HLA-DMB-262ENST00000498020 SNRKQ9NRH2 765 aa9.36□□□□□ -0.91
HLA-DMB-262ENST00000498020 TLR7Q9NYK1 1049 aaKnown RBP9.36□□□□□ -0.91
HLA-DMB-262ENST00000498020 SPDYE4A6NLX3 237 aa9.36□□□□□ -0.91
HLA-DMB-262ENST00000498020 SULF1Q8IWU6 871 aa9.36□□□□□ -0.91
HLA-DMB-262ENST00000498020 TCEANC2Q96MN5 208 aa9.36□□□□□ -0.91
HLA-DMB-262ENST00000498020 PDE6BP35913 854 aa9.36□□□□□ -0.91
HLA-DMB-262ENST00000498020 SASS6Q6UVJ0 657 aa9.36□□□□□ -0.91
HLA-DMB-262ENST00000498020 RBM17Q96I25 401 aaKnown RBP9.36□□□□□ -0.91
HLA-DMB-262ENST00000498020 ATG3Q9NT62 314 aa9.36□□□□□ -0.91
HLA-DMB-262ENST00000498020 IPO7O95373 1038 aaKnown RBP9.35□□□□□ -0.91
HLA-DMB-262ENST00000498020 MKRN3Q13064 507 aaKnown RBP9.35□□□□□ -0.91
HLA-DMB-262ENST00000498020 FAM89AQ96GI7 184 aa9.35□□□□□ -0.91
HLA-DMB-262ENST00000498020 UFL1O94874 794 aa9.35□□□□□ -0.91
HLA-DMB-262ENST00000498020 UQCRFS1P1P0C7P4 283 aa9.35□□□□□ -0.91
HLA-DMB-262ENST00000498020 CCDC192P0DO97 292 aa9.35□□□□□ -0.91
HLA-DMB-262ENST00000498020 FOSBP53539 338 aa9.35□□□□□ -0.91
HLA-DMB-262ENST00000498020 DDX11Q96FC9 970 aa9.35□□□□□ -0.91
HLA-DMB-262ENST00000498020 PCCAP05165 728 aaPredicted RBP9.35□□□□□ -0.91
HLA-DMB-262ENST00000498020 SLC5A1P13866 664 aa9.35□□□□□ -0.91
HLA-DMB-262ENST00000498020 RABL6Q3YEC7 729 aaPredicted RBP9.35□□□□□ -0.91
HLA-DMB-262ENST00000498020 BRF1Q92994 677 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms