RNA–Protein interactions for RNA: ENST00000497703.1

GARNL3-221, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 3

Gene GARNL3, Length 304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-221ENST00000497703 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.55□□□□□ -0.56
GARNL3-221ENST00000497703 USP17L7P0C7H9 530 aa11.54□□□□□ -0.56
GARNL3-221ENST00000497703 DTHD1Q6ZMT9 781 aa11.54□□□□□ -0.56
GARNL3-221ENST00000497703 TMEM102Q8N9M5 508 aaPredicted RBP11.54□□□□□ -0.56
GARNL3-221ENST00000497703 ASAP3Q8TDY4 903 aa11.54□□□□□ -0.56
GARNL3-221ENST00000497703 BACH2Q9BYV9 841 aa11.54□□□□□ -0.56
GARNL3-221ENST00000497703 SMG9Q9H0W8 520 aaKnown RBP11.54□□□□□ -0.56
GARNL3-221ENST00000497703 FRRS1LQ9P0K9 344 aa11.54□□□□□ -0.56
GARNL3-221ENST00000497703 RGS9O75916 674 aaPredicted RBP11.53□□□□□ -0.56
GARNL3-221ENST00000497703 EPXP11678 715 aa11.53□□□□□ -0.56
GARNL3-221ENST00000497703 PERM1Q5SV97 790 aa11.53□□□□□ -0.56
GARNL3-221ENST00000497703 PSAPL1Q6NUJ1 521 aa11.53□□□□□ -0.56
GARNL3-221ENST00000497703 PRPF40BQ6NWY9 871 aaKnown RBP11.53□□□□□ -0.56
GARNL3-221ENST00000497703 CCNJLQ8IV13 435 aa11.53□□□□□ -0.56
GARNL3-221ENST00000497703 SCAMP3O14828 347 aaKnown RBP11.52□□□□□ -0.57
GARNL3-221ENST00000497703 ACPPP15309 386 aa11.52□□□□□ -0.57
GARNL3-221ENST00000497703 PTPRAP18433 802 aa11.52□□□□□ -0.57
GARNL3-221ENST00000497703 FCGRTP55899 365 aa11.52□□□□□ -0.57
GARNL3-221ENST00000497703 ATP11AP98196 1134 aa11.52□□□□□ -0.57
GARNL3-221ENST00000497703 KANK3Q6NY19 840 aa11.52□□□□□ -0.57
GARNL3-221ENST00000497703 CACTIN-AS1Q8N1I8 211 aa11.52□□□□□ -0.57
GARNL3-221ENST00000497703 BHLHE41Q9C0J9 482 aaPredicted RBP11.52□□□□□ -0.57
GARNL3-221ENST00000497703 TMEM238LA0A1B0GVL6 79 aa11.51□□□□□ -0.57
GARNL3-221ENST00000497703 RECKO95980 971 aa11.51□□□□□ -0.57
GARNL3-221ENST00000497703 TCF3P15923 654 aa11.51□□□□□ -0.57
GARNL3-221ENST00000497703 AMPD1P23109 780 aa11.51□□□□□ -0.57
GARNL3-221ENST00000497703 KRT76Q01546 638 aa11.51□□□□□ -0.57
GARNL3-221ENST00000497703 GALNT6Q8NCL4 622 aa11.51□□□□□ -0.57
GARNL3-221ENST00000497703 EDARADDQ8WWZ3 215 aa11.51□□□□□ -0.57
GARNL3-221ENST00000497703 NXPE3Q969Y0 559 aa11.51□□□□□ -0.57
GARNL3-221ENST00000497703 ACDQ96AP0 544 aa11.51□□□□□ -0.57
GARNL3-221ENST00000497703 LRRC4BQ9NT99 713 aa11.51□□□□□ -0.57
GARNL3-221ENST00000497703 TRPA1O75762 1119 aa11.5□□□□□ -0.57
GARNL3-221ENST00000497703 GMPRP36959 345 aa11.5□□□□□ -0.57
GARNL3-221ENST00000497703 MAP3K10Q02779 954 aa11.5□□□□□ -0.57
GARNL3-221ENST00000497703 TCF12Q99081 682 aa11.5□□□□□ -0.57
GARNL3-221ENST00000497703 JPH1Q9HDC5 661 aaPredicted RBP11.5□□□□□ -0.57
GARNL3-221ENST00000497703 NAGPAQ9UK23 515 aa11.5□□□□□ -0.57
GARNL3-221ENST00000497703 AKAP2Q9Y2D5 859 aa11.5□□□□□ -0.57
GARNL3-221ENST00000497703 SLURP2P0DP57 97 aa11.49□□□□□ -0.57
GARNL3-221ENST00000497703 BCRP11274 1271 aa11.49□□□□□ -0.57
GARNL3-221ENST00000497703 CABP4P57796 275 aa11.49□□□□□ -0.57
GARNL3-221ENST00000497703 LPIN3Q9BQK8 851 aa11.49□□□□□ -0.57
GARNL3-221ENST00000497703 ABCB6Q9NP58 842 aa11.49□□□□□ -0.57
GARNL3-221ENST00000497703 TTF2Q9UNY4 1162 aaKnown RBP11.49□□□□□ -0.57
GARNL3-221ENST00000497703 OIP5O43482 229 aa11.48□□□□□ -0.57
GARNL3-221ENST00000497703 PTPN12Q05209 780 aaKnown RBP11.48□□□□□ -0.57
GARNL3-221ENST00000497703 TAF1CQ15572 869 aaPredicted RBP11.48□□□□□ -0.57
GARNL3-221ENST00000497703 GLIS3Q8NEA6 775 aa11.48□□□□□ -0.57
GARNL3-221ENST00000497703 NUDT8Q8WV74 236 aa11.48□□□□□ -0.57
GARNL3-221ENST00000497703 BSNDQ8WZ55 320 aa11.48□□□□□ -0.57
GARNL3-221ENST00000497703 TTC9Q92623 222 aa11.48□□□□□ -0.57
GARNL3-221ENST00000497703 MDFIQ99750 246 aa11.48□□□□□ -0.57
GARNL3-221ENST00000497703 ENAMQ9NRM1 1142 aa11.48□□□□□ -0.57
GARNL3-221ENST00000497703 METTL5Q9NRN9 209 aaKnown RBP11.48□□□□□ -0.57
GARNL3-221ENST00000497703 PPM1HQ9ULR3 514 aa11.48□□□□□ -0.57
GARNL3-221ENST00000497703 A0A096LPE4 126 aa11.47□□□□□ -0.57
GARNL3-221ENST00000497703 A0A1W2PPZ6 126 aa11.47□□□□□ -0.57
GARNL3-221ENST00000497703 NFKBIEO00221 500 aa11.47□□□□□ -0.57
GARNL3-221ENST00000497703 LILRB5O75023 590 aa11.47□□□□□ -0.57
GARNL3-221ENST00000497703 GDF6Q6KF10 455 aaPredicted RBP11.47□□□□□ -0.57
GARNL3-221ENST00000497703 POP1Q99575 1024 aaKnown RBP11.47□□□□□ -0.57
GARNL3-221ENST00000497703 GRIA4P48058 902 aa11.46□□□□□ -0.57
GARNL3-221ENST00000497703 ST13P50502 369 aaKnown RBP11.46□□□□□ -0.57
GARNL3-221ENST00000497703 CHSY3Q70JA7 882 aa11.46□□□□□ -0.57
GARNL3-221ENST00000497703 ZNF775Q96BV0 537 aaPredicted RBP11.46□□□□□ -0.57
GARNL3-221ENST00000497703 HHIPQ96QV1 700 aa11.46□□□□□ -0.57
GARNL3-221ENST00000497703 LACRTQ9GZZ8 138 aa11.46□□□□□ -0.57
GARNL3-221ENST00000497703 ZNF76P36508 570 aa11.45□□□□□ -0.58
GARNL3-221ENST00000497703 RNF34Q969K3 372 aa11.45□□□□□ -0.58
GARNL3-221ENST00000497703 CEP44Q9C0F1 390 aa11.45□□□□□ -0.58
GARNL3-221ENST00000497703 TRIM33Q9UPN9 1127 aa11.45□□□□□ -0.58
GARNL3-221ENST00000497703 METTL12A8MUP2 240 aa11.44□□□□□ -0.58
GARNL3-221ENST00000497703 CTSHP09668 335 aa11.44□□□□□ -0.58
GARNL3-221ENST00000497703 ITPKAP23677 461 aa11.44□□□□□ -0.58
GARNL3-221ENST00000497703 TREML4Q6UXN2 200 aa11.44□□□□□ -0.58
GARNL3-221ENST00000497703 MUC3BQ9H195 1237 aa11.44□□□□□ -0.58
GARNL3-221ENST00000497703 M0R082 166 aa11.43□□□□□ -0.58
GARNL3-221ENST00000497703 CDC27P30260 824 aa11.43□□□□□ -0.58
GARNL3-221ENST00000497703 SPRED3Q2MJR0 410 aa11.43□□□□□ -0.58
GARNL3-221ENST00000497703 RPS26P11Q5JNZ5 115 aaPredicted RBP11.43□□□□□ -0.58
GARNL3-221ENST00000497703 FAM117BQ6P1L5 589 aa11.43□□□□□ -0.58
GARNL3-221ENST00000497703 HS2ST1Q7LGA3 356 aa11.43□□□□□ -0.58
GARNL3-221ENST00000497703 ZNF417Q8TAU3 575 aa11.43□□□□□ -0.58
GARNL3-221ENST00000497703 DDX54Q8TDD1 881 aaKnown RBP11.43□□□□□ -0.58
GARNL3-221ENST00000497703 BTBD6Q96KE9 485 aa11.43□□□□□ -0.58
GARNL3-221ENST00000497703 ZNF587Q96SQ5 575 aaPredicted RBP11.43□□□□□ -0.58
GARNL3-221ENST00000497703 CLEC4MQ9H2X3 399 aaPredicted RBP11.43□□□□□ -0.58
GARNL3-221ENST00000497703 USP31Q70CQ4 1352 aa11.42□□□□□ -0.58
GARNL3-221ENST00000497703 CELA2BP08218 269 aaPredicted RBP11.42□□□□□ -0.58
GARNL3-221ENST00000497703 CCDC85BQ15834 202 aaPredicted RBP11.42□□□□□ -0.58
GARNL3-221ENST00000497703 MEI1Q5TIA1 1274 aa11.42□□□□□ -0.58
GARNL3-221ENST00000497703 SVOPQ8N4V2 548 aa11.42□□□□□ -0.58
GARNL3-221ENST00000497703 IL22RA1Q8N6P7 574 aa11.42□□□□□ -0.58
GARNL3-221ENST00000497703 C3orf58Q8NDZ4 430 aa11.42□□□□□ -0.58
GARNL3-221ENST00000497703 NEDD1Q8NHV4 660 aa11.42□□□□□ -0.58
GARNL3-221ENST00000497703 ADAM19Q9H013 955 aa11.42□□□□□ -0.58
GARNL3-221ENST00000497703 EIF4EBP3O60516 100 aaPredicted RBP11.41□□□□□ -0.58
GARNL3-221ENST00000497703 ALBP02768 609 aa11.41□□□□□ -0.58
GARNL3-221ENST00000497703 PPP2R3AQ06190 1150 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms