RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-223ENST00000497597 SALL3Q9BXA9 1300 aa12.23□□□□□ -0.45
TRAPPC12-223ENST00000497597 PSDA5PKW4 1024 aaPredicted RBP12.23□□□□□ -0.45
TRAPPC12-223ENST00000497597 ZNF569Q5MCW4 686 aa12.23□□□□□ -0.45
TRAPPC12-223ENST00000497597 BAG1Q99933 345 aaPredicted RBP12.23□□□□□ -0.45
TRAPPC12-223ENST00000497597 PCDHA7Q9UN72 937 aa12.23□□□□□ -0.45
TRAPPC12-223ENST00000497597 MUM1L1Q5H9M0 696 aa12.23□□□□□ -0.45
TRAPPC12-223ENST00000497597 SPECC1Q5M775 1068 aa12.23□□□□□ -0.45
TRAPPC12-223ENST00000497597 REXO1L1PQ8IX06 675 aa12.23□□□□□ -0.45
TRAPPC12-223ENST00000497597 TRMT44Q8IYL2 757 aaKnown RBP12.23□□□□□ -0.45
TRAPPC12-223ENST00000497597 EXOC4Q96A65 974 aa12.23□□□□□ -0.45
TRAPPC12-223ENST00000497597 ZSCAN16Q9H4T2 348 aaPredicted RBP12.23□□□□□ -0.45
TRAPPC12-223ENST00000497597 ZMYND10O75800 440 aa12.23□□□□□ -0.45
TRAPPC12-223ENST00000497597 HAND2P61296 217 aa12.23□□□□□ -0.45
TRAPPC12-223ENST00000497597 TOB2Q14106 344 aaPredicted RBP12.23□□□□□ -0.45
TRAPPC12-223ENST00000497597 DDX46Q7L014 1031 aaKnown RBP12.23□□□□□ -0.45
TRAPPC12-223ENST00000497597 NEUROD6Q96NK8 337 aa12.23□□□□□ -0.45
TRAPPC12-223ENST00000497597 TLR7Q9NYK1 1049 aaKnown RBP12.23□□□□□ -0.45
TRAPPC12-223ENST00000497597 KIAA1468Q9P260 1216 aa12.23□□□□□ -0.45
TRAPPC12-223ENST00000497597 PATL2C9JE40 543 aaKnown RBP12.22□□□□□ -0.45
TRAPPC12-223ENST00000497597 FANCGO15287 622 aa12.22□□□□□ -0.45
TRAPPC12-223ENST00000497597 NECTIN1Q15223 517 aa12.22□□□□□ -0.45
TRAPPC12-223ENST00000497597 CWF19L2Q2TBE0 894 aaKnown RBP12.22□□□□□ -0.45
TRAPPC12-223ENST00000497597 CT47A1Q5JQC4 288 aaPredicted RBP12.22□□□□□ -0.45
TRAPPC12-223ENST00000497597 SSH3Q8TE77 659 aa12.22□□□□□ -0.45
TRAPPC12-223ENST00000497597 PPM1EQ8WY54 764 aa12.22□□□□□ -0.45
TRAPPC12-223ENST00000497597 NUDT16Q96DE0 195 aaKnown RBP12.22□□□□□ -0.45
TRAPPC12-223ENST00000497597 FAM204AQ9H8W3 233 aa12.22□□□□□ -0.45
TRAPPC12-223ENST00000497597 ECM2O94769 699 aaPredicted RBP12.22□□□□□ -0.45
TRAPPC12-223ENST00000497597 SETQ01105 290 aaPredicted RBP12.22□□□□□ -0.45
TRAPPC12-223ENST00000497597 POLD4Q9HCU8 107 aa12.22□□□□□ -0.45
TRAPPC12-223ENST00000497597 ABCB6Q9NP58 842 aa12.22□□□□□ -0.45
TRAPPC12-223ENST00000497597 PARP3Q9Y6F1 533 aa12.22□□□□□ -0.45
TRAPPC12-223ENST00000497597 ZNF827Q17R98 1081 aa12.21□□□□□ -0.45
TRAPPC12-223ENST00000497597 HDXQ7Z353 690 aa12.21□□□□□ -0.45
TRAPPC12-223ENST00000497597 ANKRD20A12PQ8NF67 263 aa12.21□□□□□ -0.45
TRAPPC12-223ENST00000497597 NCAPGQ9BPX3 1015 aa12.21□□□□□ -0.45
TRAPPC12-223ENST00000497597 FAM107BQ9H098 131 aa12.21□□□□□ -0.45
TRAPPC12-223ENST00000497597 IMPACTQ9P2X3 320 aa12.21□□□□□ -0.45
TRAPPC12-223ENST00000497597 ABCC1P33527 1531 aa12.21□□□□□ -0.45
TRAPPC12-223ENST00000497597 ADGRB2O60241 1585 aa12.21□□□□□ -0.45
TRAPPC12-223ENST00000497597 PLCH2O75038 1416 aa12.21□□□□□ -0.45
TRAPPC12-223ENST00000497597 CBFA2T2O43439 604 aa12.21□□□□□ -0.45
TRAPPC12-223ENST00000497597 MAGEA9P43362 315 aa12.21□□□□□ -0.45
TRAPPC12-223ENST00000497597 SCRN1Q12765 414 aa12.21□□□□□ -0.45
TRAPPC12-223ENST00000497597 TOGARAM2Q6ZUX3 1019 aa12.21□□□□□ -0.45
TRAPPC12-223ENST00000497597 TM6SF1Q9BZW5 370 aa12.21□□□□□ -0.45
TRAPPC12-223ENST00000497597 FANCLQ9NW38 375 aa12.21□□□□□ -0.45
TRAPPC12-223ENST00000497597 CHPF2Q9P2E5 772 aa12.21□□□□□ -0.45
TRAPPC12-223ENST00000497597 KIF5CO60282 957 aa12.21□□□□□ -0.46
TRAPPC12-223ENST00000497597 PDE6BP35913 854 aa12.21□□□□□ -0.46
TRAPPC12-223ENST00000497597 MTF1Q14872 753 aa12.21□□□□□ -0.46
TRAPPC12-223ENST00000497597 FUT8Q9BYC5 575 aa12.21□□□□□ -0.46
TRAPPC12-223ENST00000497597 CLIC4Q9Y696 253 aa12.21□□□□□ -0.46
TRAPPC12-223ENST00000497597 ZNF202O95125 648 aa12.2□□□□□ -0.46
TRAPPC12-223ENST00000497597 GUCY2CP25092 1073 aa12.2□□□□□ -0.46
TRAPPC12-223ENST00000497597 MAP2K2P36507 400 aa12.2□□□□□ -0.46
TRAPPC12-223ENST00000497597 CCT5P48643 541 aa12.2□□□□□ -0.46
TRAPPC12-223ENST00000497597 FBXO31Q5XUX0 539 aaPredicted RBP12.2□□□□□ -0.46
TRAPPC12-223ENST00000497597 RIN2Q8WYP3 895 aaPredicted RBP12.2□□□□□ -0.46
TRAPPC12-223ENST00000497597 C8orf76Q96K31 380 aa12.2□□□□□ -0.46
TRAPPC12-223ENST00000497597 CAPZA3Q96KX2 299 aa12.2□□□□□ -0.46
TRAPPC12-223ENST00000497597 ACBD3Q9H3P7 528 aa12.2□□□□□ -0.46
TRAPPC12-223ENST00000497597 KCNG1Q9UIX4 513 aa12.2□□□□□ -0.46
TRAPPC12-223ENST00000497597 YTHDC2Q9H6S0 1430 aaKnown RBP12.2□□□□□ -0.46
TRAPPC12-223ENST00000497597 STX17P56962 302 aa12.2□□□□□ -0.46
TRAPPC12-223ENST00000497597 PNOCQ13519 176 aa12.2□□□□□ -0.46
TRAPPC12-223ENST00000497597 OSBPL5Q9H0X9 879 aaPredicted RBP12.2□□□□□ -0.46
TRAPPC12-223ENST00000497597 REREQ9P2R6 1566 aa12.2□□□□□ -0.46
TRAPPC12-223ENST00000497597 SPTLC2O15270 562 aa12.2□□□□□ -0.46
TRAPPC12-223ENST00000497597 SYKP43405 635 aa12.19□□□□□ -0.46
TRAPPC12-223ENST00000497597 FBXW10Q5XX13 1052 aa12.19□□□□□ -0.46
TRAPPC12-223ENST00000497597 CCDC91Q7Z6B0 441 aa12.19□□□□□ -0.46
TRAPPC12-223ENST00000497597 CAGE1Q8TC20 777 aa12.19□□□□□ -0.46
TRAPPC12-223ENST00000497597 MPHOSPH8Q99549 860 aa12.19□□□□□ -0.46
TRAPPC12-223ENST00000497597 SAMM50Q9Y512 469 aa12.19□□□□□ -0.46
TRAPPC12-223ENST00000497597 PHLPP2Q6ZVD8 1323 aa12.19□□□□□ -0.46
TRAPPC12-223ENST00000497597 RXRAP19793 462 aa12.19□□□□□ -0.46
TRAPPC12-223ENST00000497597 TXLNAP40222 546 aa12.19□□□□□ -0.46
TRAPPC12-223ENST00000497597 CCDC93Q567U6 631 aa12.19□□□□□ -0.46
TRAPPC12-223ENST00000497597 NBPF6Q5VWK0 638 aa12.19□□□□□ -0.46
TRAPPC12-223ENST00000497597 PPFIBP1Q86W92 1011 aa12.19□□□□□ -0.46
TRAPPC12-223ENST00000497597 MAP4K1Q92918 833 aa12.19□□□□□ -0.46
TRAPPC12-223ENST00000497597 EAF2Q96CJ1 260 aaPredicted RBP12.19□□□□□ -0.46
TRAPPC12-223ENST00000497597 NBPF4Q96M43 638 aa12.19□□□□□ -0.46
TRAPPC12-223ENST00000497597 CRACR2AQ9BSW2 395 aa12.19□□□□□ -0.46
TRAPPC12-223ENST00000497597 KIAA0232Q92628 1395 aa12.19□□□□□ -0.46
TRAPPC12-223ENST00000497597 ERLIN2O94905 339 aa12.18□□□□□ -0.46
TRAPPC12-223ENST00000497597 ATP2B2Q01814 1243 aa12.18□□□□□ -0.46
TRAPPC12-223ENST00000497597 GIMAP7Q8NHV1 300 aa12.18□□□□□ -0.46
TRAPPC12-223ENST00000497597 GPHNQ9NQX3 736 aaPredicted RBP12.18□□□□□ -0.46
TRAPPC12-223ENST00000497597 COBLO75128 1261 aa12.18□□□□□ -0.46
TRAPPC12-223ENST00000497597 SSBP05455 408 aaKnown RBP eCLIP12.18□□□□□ -0.46
TRAPPC12-223ENST00000497597 RDXP35241 583 aaKnown RBP12.18□□□□□ -0.46
TRAPPC12-223ENST00000497597 TDO2P48775 406 aa12.18□□□□□ -0.46
TRAPPC12-223ENST00000497597 RABGGTAQ92696 567 aa12.18□□□□□ -0.46
TRAPPC12-223ENST00000497597 ATG3Q9NT62 314 aa12.18□□□□□ -0.46
TRAPPC12-223ENST00000497597 RPGRIP1LQ68CZ1 1315 aa12.18□□□□□ -0.46
TRAPPC12-223ENST00000497597 HIP1O00291 1037 aa12.18□□□□□ -0.46
TRAPPC12-223ENST00000497597 RAPGEF3O95398 923 aa12.18□□□□□ -0.46
TRAPPC12-223ENST00000497597 MYL5Q02045 173 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms