RNA–Protein interactions for RNA: ENST00000497448.1

TOM1-217, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-217ENST00000497448 SASH1O94885 1247 aa13.71□□□□□ -0.21
TOM1-217ENST00000497448 NEFMP07197 916 aa13.71□□□□□ -0.21
TOM1-217ENST00000497448 SLC17A8Q8NDX2 589 aa13.71□□□□□ -0.21
TOM1-217ENST00000497448 PLEKHF1Q96S99 279 aa13.71□□□□□ -0.21
TOM1-217ENST00000497448 TMEM106CQ9BVX2 250 aa13.71□□□□□ -0.21
TOM1-217ENST00000497448 EFCC1Q9HA90 598 aa13.71□□□□□ -0.21
TOM1-217ENST00000497448 SEC31BQ9NQW1 1179 aa13.71□□□□□ -0.21
TOM1-217ENST00000497448 ANGEL1Q9UNK9 670 aaKnown RBP13.71□□□□□ -0.21
TOM1-217ENST00000497448 ZSWIM8A7E2V4 1837 aa13.7□□□□□ -0.22
TOM1-217ENST00000497448 ATP5J2-PTCD1G3V325 749 aa13.7□□□□□ -0.22
TOM1-217ENST00000497448 IRS4O14654 1257 aaPredicted RBP13.7□□□□□ -0.22
TOM1-217ENST00000497448 ZBTB48P10074 688 aaPredicted RBP13.7□□□□□ -0.22
TOM1-217ENST00000497448 INHBEP58166 350 aa13.7□□□□□ -0.22
TOM1-217ENST00000497448 CRHR2Q13324 411 aa13.7□□□□□ -0.22
TOM1-217ENST00000497448 MXD3Q9BW11 206 aa13.7□□□□□ -0.22
TOM1-217ENST00000497448 DACT2Q5SW24 774 aa13.69□□□□□ -0.22
TOM1-217ENST00000497448 PODNQ7Z5L7 613 aa13.69□□□□□ -0.22
TOM1-217ENST00000497448 APOBEC3FQ8IUX4 373 aaKnown RBP13.69□□□□□ -0.22
TOM1-217ENST00000497448 WNK4Q96J92 1243 aa13.69□□□□□ -0.22
TOM1-217ENST00000497448 RBM27Q9P2N5 1060 aaKnown RBP13.69□□□□□ -0.22
TOM1-217ENST00000497448 A0A0C4DFX4 3053 aa13.69□□□□□ -0.22
TOM1-217ENST00000497448 XDHP47989 1333 aa13.68□□□□□ -0.22
TOM1-217ENST00000497448 PLBD2Q8NHP8 589 aa13.68□□□□□ -0.22
TOM1-217ENST00000497448 CLMNQ96JQ2 1002 aa13.68□□□□□ -0.22
TOM1-217ENST00000497448 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.68□□□□□ -0.22
TOM1-217ENST00000497448 MED23Q9ULK4 1368 aa13.68□□□□□ -0.22
TOM1-217ENST00000497448 SP3Q02447 781 aa13.67□□□□□ -0.22
TOM1-217ENST00000497448 MAP3K11Q16584 847 aa13.67□□□□□ -0.22
TOM1-217ENST00000497448 SLC9C1Q4G0N8 1177 aa13.67□□□□□ -0.22
TOM1-217ENST00000497448 OGFOD1Q8N543 542 aa13.67□□□□□ -0.22
TOM1-217ENST00000497448 CHPF2Q9P2E5 772 aa13.67□□□□□ -0.22
TOM1-217ENST00000497448 PTCH2Q9Y6C5 1203 aa13.67□□□□□ -0.22
TOM1-217ENST00000497448 LAMA3Q16787 3333 aa13.67□□□□□ -0.22
TOM1-217ENST00000497448 MYO3BQ8WXR4 1341 aa13.66□□□□□ -0.22
TOM1-217ENST00000497448 GJA5P36382 358 aa13.66□□□□□ -0.22
TOM1-217ENST00000497448 KRT24Q2M2I5 525 aa13.66□□□□□ -0.22
TOM1-217ENST00000497448 SLC4A8Q2Y0W8 1093 aa13.66□□□□□ -0.22
TOM1-217ENST00000497448 FBXW7Q969H0 707 aa13.66□□□□□ -0.22
TOM1-217ENST00000497448 SLC10A4Q96EP9 437 aa13.66□□□□□ -0.22
TOM1-217ENST00000497448 MAPK8IP3Q9UPT6 1336 aa13.65□□□□□ -0.22
TOM1-217ENST00000497448 MYH3P11055 1940 aa13.65□□□□□ -0.22
TOM1-217ENST00000497448 ATP2B4P23634 1241 aa13.65□□□□□ -0.22
TOM1-217ENST00000497448 ANKRD13DQ6ZTN6 518 aa13.65□□□□□ -0.22
TOM1-217ENST00000497448 BABAM1Q9NWV8 329 aa13.65□□□□□ -0.22
TOM1-217ENST00000497448 WTIPA6NIX2 430 aaPredicted RBP13.64□□□□□ -0.23
TOM1-217ENST00000497448 MYCP01106 439 aaPredicted RBP13.64□□□□□ -0.23
TOM1-217ENST00000497448 STRIP1Q5VSL9 837 aa13.64□□□□□ -0.23
TOM1-217ENST00000497448 NBPF11Q86T75 865 aa13.64□□□□□ -0.23
TOM1-217ENST00000497448 ZBED3Q96IU2 234 aaPredicted RBP13.64□□□□□ -0.23
TOM1-217ENST00000497448 CCDC85AQ96PX6 553 aaPredicted RBP13.64□□□□□ -0.23
TOM1-217ENST00000497448 PTPN18Q99952 460 aa13.64□□□□□ -0.23
TOM1-217ENST00000497448 PRO3102Q9H379 93 aa13.64□□□□□ -0.23
TOM1-217ENST00000497448 TRIM28Q13263 835 aaKnown RBP13.63□□□□□ -0.23
TOM1-217ENST00000497448 CCDC152Q4G0S7 254 aa13.63□□□□□ -0.23
TOM1-217ENST00000497448 OTUD7BQ6GQQ9 843 aa13.63□□□□□ -0.23
TOM1-217ENST00000497448 ZBTB38Q8NAP3 1195 aaPredicted RBP13.63□□□□□ -0.23
TOM1-217ENST00000497448 SHISA4Q96DD7 197 aa13.63□□□□□ -0.23
TOM1-217ENST00000497448 DEFB129Q9H1M3 183 aa13.63□□□□□ -0.23
TOM1-217ENST00000497448 TESPA1A2RU30 521 aaPredicted RBP13.62□□□□□ -0.23
TOM1-217ENST00000497448 KIAA0825Q8IV33 1275 aa13.62□□□□□ -0.23
TOM1-217ENST00000497448 ANKRD18AQ8IVF6 992 aa13.62□□□□□ -0.23
TOM1-217ENST00000497448 SH3TC2Q8TF17 1288 aa13.62□□□□□ -0.23
TOM1-217ENST00000497448 CUL9Q8IWT3 2517 aa13.62□□□□□ -0.23
TOM1-217ENST00000497448 UNCXA6NJT0 531 aa13.61□□□□□ -0.23
TOM1-217ENST00000497448 PPP1R12BO60237 982 aaPredicted RBP13.61□□□□□ -0.23
TOM1-217ENST00000497448 MMP14P50281 582 aa13.61□□□□□ -0.23
TOM1-217ENST00000497448 HDGFL1Q5TGJ6 251 aa13.61□□□□□ -0.23
TOM1-217ENST00000497448 PPP2R3BQ9Y5P8 575 aa13.61□□□□□ -0.23
TOM1-217ENST00000497448 PDE8AO60658 829 aa13.6□□□□□ -0.23
TOM1-217ENST00000497448 TXNRD3Q86VQ6 643 aa13.6□□□□□ -0.23
TOM1-217ENST00000497448 DPF3Q92784 378 aa13.6□□□□□ -0.23
TOM1-217ENST00000497448 COA1Q9GZY4 146 aa13.6□□□□□ -0.23
TOM1-217ENST00000497448 DBF4Q9UBU7 674 aaPredicted RBP13.6□□□□□ -0.23
TOM1-217ENST00000497448 ZNF804BA4D1E1 1349 aa13.6□□□□□ -0.23
TOM1-217ENST00000497448 UNC80Q8N2C7 3258 aa13.59□□□□□ -0.23
TOM1-217ENST00000497448 SOX1O00570 391 aaPredicted RBP13.59□□□□□ -0.23
TOM1-217ENST00000497448 HSP90B1P14625 803 aaKnown RBP13.59□□□□□ -0.23
TOM1-217ENST00000497448 MNX1P50219 401 aaPredicted RBP13.59□□□□□ -0.23
TOM1-217ENST00000497448 CCT4P50991 539 aaKnown RBP13.59□□□□□ -0.23
TOM1-217ENST00000497448 RIPK4P57078 832 aa13.59□□□□□ -0.23
TOM1-217ENST00000497448 ARHGEF6Q15052 776 aa13.59□□□□□ -0.23
TOM1-217ENST00000497448 TAF1CQ15572 869 aaPredicted RBP13.59□□□□□ -0.23
TOM1-217ENST00000497448 A0A1B0GUL6 1792 aa13.58□□□□□ -0.23
TOM1-217ENST00000497448 PCCAP05165 728 aaPredicted RBP13.58□□□□□ -0.24
TOM1-217ENST00000497448 KLRK1P26718 216 aa13.58□□□□□ -0.24
TOM1-217ENST00000497448 IREB2P48200 963 aaKnown RBP13.58□□□□□ -0.24
TOM1-217ENST00000497448 NBPF12Q5TAG4 269 aaPredicted RBP13.58□□□□□ -0.24
TOM1-217ENST00000497448 TTLL5Q6EMB2 1281 aa13.58□□□□□ -0.24
TOM1-217ENST00000497448 ANKRD13AQ8IZ07 590 aa13.58□□□□□ -0.24
TOM1-217ENST00000497448 BRI3BPQ8WY22 251 aa13.58□□□□□ -0.24
TOM1-217ENST00000497448 JARID2Q92833 1246 aaPredicted RBP13.58□□□□□ -0.24
TOM1-217ENST00000497448 OPTNQ96CV9 577 aa13.58□□□□□ -0.24
TOM1-217ENST00000497448 MS4A4AQ96JQ5 239 aa13.58□□□□□ -0.24
TOM1-217ENST00000497448 ARHGAP39Q9C0H5 1083 aa13.58□□□□□ -0.24
TOM1-217ENST00000497448 MINPP1Q9UNW1 487 aa13.58□□□□□ -0.24
TOM1-217ENST00000497448 PCDHAC2Q9Y5I4 1007 aa13.58□□□□□ -0.24
TOM1-217ENST00000497448 ARAP2Q8WZ64 1704 aa13.58□□□□□ -0.24
TOM1-217ENST00000497448 CLRN2A0PK11 232 aa13.57□□□□□ -0.24
TOM1-217ENST00000497448 USP2O75604 605 aaPredicted RBP13.57□□□□□ -0.24
TOM1-217ENST00000497448 HOXB7P09629 217 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms