RNA–Protein interactions for RNA: ENST00000497377.5

HLA-B-254, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 917 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-254ENST00000497377 NMRK2Q9NPI5 230 aa14.37□□□□□ -0.11
HLA-B-254ENST00000497377 LEMD3Q9Y2U8 911 aa14.37□□□□□ -0.11
HLA-B-254ENST00000497377 DDNO94850 711 aaPredicted RBP14.36□□□□□ -0.11
HLA-B-254ENST00000497377 MS4A1P11836 297 aa14.36□□□□□ -0.11
HLA-B-254ENST00000497377 LDHAL6AQ6ZMR3 332 aa14.36□□□□□ -0.11
HLA-B-254ENST00000497377 FTSJ3Q8IY81 847 aaKnown RBP14.36□□□□□ -0.11
HLA-B-254ENST00000497377 ANKRD44Q8N8A2 993 aa14.36□□□□□ -0.11
HLA-B-254ENST00000497377 RRAGCQ9HB90 399 aa14.36□□□□□ -0.11
HLA-B-254ENST00000497377 RCAN3Q9UKA8 241 aa14.36□□□□□ -0.11
HLA-B-254ENST00000497377 ZNF541Q9H0D2 1346 aa14.36□□□□□ -0.11
HLA-B-254ENST00000497377 SCN4AP35499 1836 aa14.36□□□□□ -0.11
HLA-B-254ENST00000497377 IQCA1LA6NCM1 817 aa14.35□□□□□ -0.11
HLA-B-254ENST00000497377 C16orf71Q8IYS4 520 aaPredicted RBP14.35□□□□□ -0.11
HLA-B-254ENST00000497377 DZIP1LQ8IYY4 767 aaKnown RBP14.35□□□□□ -0.11
HLA-B-254ENST00000497377 CLUAP1Q96AJ1 413 aa14.35□□□□□ -0.11
HLA-B-254ENST00000497377 MED23Q9ULK4 1368 aa14.34□□□□□ -0.11
HLA-B-254ENST00000497377 G3V3G9 751 aa14.34□□□□□ -0.11
HLA-B-254ENST00000497377 TOMM70O94826 608 aa14.34□□□□□ -0.11
HLA-B-254ENST00000497377 CHRNDQ07001 517 aa14.34□□□□□ -0.11
HLA-B-254ENST00000497377 TNIP1Q15025 636 aa14.34□□□□□ -0.11
HLA-B-254ENST00000497377 MEIS3Q99687 375 aa14.34□□□□□ -0.11
HLA-B-254ENST00000497377 CNNM1Q9NRU3 951 aa14.34□□□□□ -0.11
HLA-B-254ENST00000497377 A0A1B0GUL6 1792 aa14.33□□□□□ -0.12
HLA-B-254ENST00000497377 RIMBP2O15034 1052 aa14.33□□□□□ -0.12
HLA-B-254ENST00000497377 CXCL9Q07325 125 aa14.33□□□□□ -0.12
HLA-B-254ENST00000497377 CIAPIN1Q6FI81 312 aa14.33□□□□□ -0.12
HLA-B-254ENST00000497377 ZNF804BA4D1E1 1349 aa14.33□□□□□ -0.12
HLA-B-254ENST00000497377 TTLL13PA6NNM8 815 aa14.32□□□□□ -0.12
HLA-B-254ENST00000497377 ECE2O60344 883 aa14.32□□□□□ -0.12
HLA-B-254ENST00000497377 KCNJ4P48050 445 aa14.32□□□□□ -0.12
HLA-B-254ENST00000497377 C1QTNF8P60827 252 aa14.32□□□□□ -0.12
HLA-B-254ENST00000497377 TMEM57Q8N5G2 664 aa14.32□□□□□ -0.12
HLA-B-254ENST00000497377 RBM46Q8TBY0 533 aaKnown RBP14.32□□□□□ -0.12
HLA-B-254ENST00000497377 ZNF594Q96JF6 807 aaPredicted RBP14.32□□□□□ -0.12
HLA-B-254ENST00000497377 TNNQ9UQP3 1299 aa14.32□□□□□ -0.12
HLA-B-254ENST00000497377 LRRFIP2Q9Y608 721 aaKnown RBP14.32□□□□□ -0.12
HLA-B-254ENST00000497377 GJA3Q9Y6H8 435 aa14.32□□□□□ -0.12
HLA-B-254ENST00000497377 MROH5Q6ZUA9 1318 aa14.32□□□□□ -0.12
HLA-B-254ENST00000497377 YDJCA8MPS7 323 aa14.31□□□□□ -0.12
HLA-B-254ENST00000497377 POTECB2RU33 542 aa14.31□□□□□ -0.12
HLA-B-254ENST00000497377 GNAI2P04899 355 aa14.31□□□□□ -0.12
HLA-B-254ENST00000497377 LMOD1P29536 600 aaPredicted RBP14.31□□□□□ -0.12
HLA-B-254ENST00000497377 C15orf52Q6ZUT6 534 aaKnown RBP14.31□□□□□ -0.12
HLA-B-254ENST00000497377 PODNQ7Z5L7 613 aa14.31□□□□□ -0.12
HLA-B-254ENST00000497377 IFNL1Q8IU54 200 aa14.31□□□□□ -0.12
HLA-B-254ENST00000497377 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.31□□□□□ -0.12
HLA-B-254ENST00000497377 DBNDD1Q9H9R9 158 aa14.31□□□□□ -0.12
HLA-B-254ENST00000497377 HACL1Q9UJ83 578 aa14.31□□□□□ -0.12
HLA-B-254ENST00000497377 RIPOR2Q9Y4F9 1068 aa14.31□□□□□ -0.12
HLA-B-254ENST00000497377 RAD17O75943 681 aa14.3□□□□□ -0.12
HLA-B-254ENST00000497377 MTX1Q13505 466 aa14.3□□□□□ -0.12
HLA-B-254ENST00000497377 DOK7Q18PE1 504 aa14.3□□□□□ -0.12
HLA-B-254ENST00000497377 ITPRIPQ8IWB1 547 aa14.3□□□□□ -0.12
HLA-B-254ENST00000497377 GPR101Q96P66 508 aaPredicted RBP14.3□□□□□ -0.12
HLA-B-254ENST00000497377 COA1Q9GZY4 146 aa14.3□□□□□ -0.12
HLA-B-254ENST00000497377 PSME4Q14997 1843 aa14.29□□□□□ -0.12
HLA-B-254ENST00000497377 RLBP1P12271 317 aa14.29□□□□□ -0.12
HLA-B-254ENST00000497377 RFX5P48382 616 aaPredicted RBP14.29□□□□□ -0.12
HLA-B-254ENST00000497377 PTPN12Q05209 780 aaKnown RBP14.29□□□□□ -0.12
HLA-B-254ENST00000497377 FSTL1Q12841 308 aa14.29□□□□□ -0.12
HLA-B-254ENST00000497377 UBE4AQ14139 1066 aa14.29□□□□□ -0.12
HLA-B-254ENST00000497377 PNMA8AQ86V59 439 aaPredicted RBP14.29□□□□□ -0.12
HLA-B-254ENST00000497377 YTHDC1Q96MU7 727 aaKnown RBP14.29□□□□□ -0.12
HLA-B-254ENST00000497377 TAF1DQ9H5J8 278 aaPredicted RBP14.29□□□□□ -0.12
HLA-B-254ENST00000497377 ZNF609O15014 1411 aa14.28□□□□□ -0.12
HLA-B-254ENST00000497377 TAF5LO75529 589 aa14.28□□□□□ -0.12
HLA-B-254ENST00000497377 CIAO1O76071 339 aa14.28□□□□□ -0.12
HLA-B-254ENST00000497377 PYGBP11216 843 aa14.28□□□□□ -0.12
HLA-B-254ENST00000497377 RPS12P25398 132 aaKnown RBP14.28□□□□□ -0.12
HLA-B-254ENST00000497377 EPHX2P34913 555 aa14.28□□□□□ -0.12
HLA-B-254ENST00000497377 SCNN1DP51172 638 aa14.28□□□□□ -0.12
HLA-B-254ENST00000497377 SMC1BQ8NDV3 1235 aa14.28□□□□□ -0.12
HLA-B-254ENST00000497377 HELBQ8NG08 1087 aaPredicted RBP14.28□□□□□ -0.12
HLA-B-254ENST00000497377 DPF2Q92785 391 aa14.28□□□□□ -0.12
HLA-B-254ENST00000497377 PUS3Q9BZE2 481 aaKnown RBP14.28□□□□□ -0.12
HLA-B-254ENST00000497377 GPRC5DQ9NZD1 345 aa14.28□□□□□ -0.12
HLA-B-254ENST00000497377 SCN9AQ15858 1988 aa14.27□□□□□ -0.12
HLA-B-254ENST00000497377 WTIPA6NIX2 430 aaPredicted RBP14.27□□□□□ -0.13
HLA-B-254ENST00000497377 EYA2O00167 538 aa14.27□□□□□ -0.13
HLA-B-254ENST00000497377 PSMD14O00487 310 aa14.27□□□□□ -0.13
HLA-B-254ENST00000497377 ZBTB7BO15156 539 aaPredicted RBP14.27□□□□□ -0.13
HLA-B-254ENST00000497377 PLIN1O60240 522 aa14.27□□□□□ -0.13
HLA-B-254ENST00000497377 VIL1P09327 827 aaKnown RBP14.27□□□□□ -0.13
HLA-B-254ENST00000497377 GMPSP49915 693 aaPredicted RBP14.27□□□□□ -0.13
HLA-B-254ENST00000497377 PDE3AQ14432 1141 aa14.27□□□□□ -0.13
HLA-B-254ENST00000497377 LRRC24Q50LG9 513 aa14.27□□□□□ -0.13
HLA-B-254ENST00000497377 METTL24Q5JXM2 366 aa14.27□□□□□ -0.13
HLA-B-254ENST00000497377 MAMSTRQ6ZN01 415 aa14.27□□□□□ -0.13
HLA-B-254ENST00000497377 LDHDQ86WU2 507 aa14.27□□□□□ -0.13
HLA-B-254ENST00000497377 CHMP4BQ9H444 224 aaKnown RBP14.27□□□□□ -0.13
HLA-B-254ENST00000497377 COPRSQ9NQ92 184 aa14.27□□□□□ -0.13
HLA-B-254ENST00000497377 IRS2Q9Y4H2 1338 aa14.26□□□□□ -0.13
HLA-B-254ENST00000497377 USP17L3A6NCW0 530 aa14.26□□□□□ -0.13
HLA-B-254ENST00000497377 USP17L4A6NCW7 530 aa14.26□□□□□ -0.13
HLA-B-254ENST00000497377 SRGAP3O43295 1099 aa14.26□□□□□ -0.13
HLA-B-254ENST00000497377 PDE8BO95263 885 aa14.26□□□□□ -0.13
HLA-B-254ENST00000497377 SEC24BO95487 1268 aa14.26□□□□□ -0.13
HLA-B-254ENST00000497377 USP17L1Q7RTZ2 530 aa14.26□□□□□ -0.13
HLA-B-254ENST00000497377 ZNF804AQ7Z570 1209 aa14.26□□□□□ -0.13
HLA-B-254ENST00000497377 TXNRD3Q86VQ6 643 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms