RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 CDC27P30260 824 aa6.79□□□□□ -1.32
VPS26A-208ENST00000497022 FAM117BQ6P1L5 589 aa6.79□□□□□ -1.32
VPS26A-208ENST00000497022 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.79□□□□□ -1.32
VPS26A-208ENST00000497022 KIAA1211Q6ZU35 1233 aa6.79□□□□□ -1.32
VPS26A-208ENST00000497022 OR13H1Q8NG92 308 aa6.79□□□□□ -1.32
VPS26A-208ENST00000497022 SPACA7Q96KW9 195 aa6.79□□□□□ -1.32
VPS26A-208ENST00000497022 HIF3AQ9Y2N7 669 aa6.79□□□□□ -1.32
VPS26A-208ENST00000497022 DUOXA2Q1HG44 320 aa6.78□□□□□ -1.32
VPS26A-208ENST00000497022 ANKRD34AQ69YU3 496 aa6.78□□□□□ -1.32
VPS26A-208ENST00000497022 SHKBP1Q8TBC3 707 aa6.78□□□□□ -1.32
VPS26A-208ENST00000497022 KCNK4Q9NYG8 393 aa6.78□□□□□ -1.32
VPS26A-208ENST00000497022 CXXC1Q9P0U4 656 aaPredicted RBP6.78□□□□□ -1.32
VPS26A-208ENST00000497022 FSCN2O14926 492 aa6.77□□□□□ -1.33
VPS26A-208ENST00000497022 JAG1P78504 1218 aa6.77□□□□□ -1.33
VPS26A-208ENST00000497022 HYAL2Q12891 473 aa6.77□□□□□ -1.33
VPS26A-208ENST00000497022 COX20Q5RI15 118 aa6.77□□□□□ -1.33
VPS26A-208ENST00000497022 CLP1Q92989 425 aaKnown RBP6.77□□□□□ -1.33
VPS26A-208ENST00000497022 SART1O43290 800 aaKnown RBP6.76□□□□□ -1.33
VPS26A-208ENST00000497022 TRIP4Q15650 581 aaPredicted RBP6.76□□□□□ -1.33
VPS26A-208ENST00000497022 CEP135Q66GS9 1140 aa6.76□□□□□ -1.33
VPS26A-208ENST00000497022 TXNDC11Q6PKC3 985 aa6.76□□□□□ -1.33
VPS26A-208ENST00000497022 BEND4Q6ZU67 534 aa6.76□□□□□ -1.33
VPS26A-208ENST00000497022 COL26A1Q96A83 441 aa6.76□□□□□ -1.33
VPS26A-208ENST00000497022 LACRTQ9GZZ8 138 aa6.76□□□□□ -1.33
VPS26A-208ENST00000497022 FAM13BQ9NYF5 915 aa6.76□□□□□ -1.33
VPS26A-208ENST00000497022 SLAIN2Q9P270 581 aa6.76□□□□□ -1.33
VPS26A-208ENST00000497022 BMP3P12645 472 aa6.75□□□□□ -1.33
VPS26A-208ENST00000497022 ATP11AP98196 1134 aa6.75□□□□□ -1.33
VPS26A-208ENST00000497022 CPSF6Q16630 551 aaKnown RBP eCLIP6.75□□□□□ -1.33
VPS26A-208ENST00000497022 CAPN12Q6ZSI9 719 aa6.75□□□□□ -1.33
VPS26A-208ENST00000497022 GIMAP7Q8NHV1 300 aa6.75□□□□□ -1.33
VPS26A-208ENST00000497022 FOXD4L4Q8WXT5 416 aaPredicted RBP6.75□□□□□ -1.33
VPS26A-208ENST00000497022 WNT8BQ93098 351 aa6.75□□□□□ -1.33
VPS26A-208ENST00000497022 SAP130Q9H0E3 1048 aa6.75□□□□□ -1.33
VPS26A-208ENST00000497022 PIM2Q9P1W9 311 aa6.75□□□□□ -1.33
VPS26A-208ENST00000497022 FAM177BA6PVY3 158 aa6.74□□□□□ -1.33
VPS26A-208ENST00000497022 PPP1R15AO75807 674 aaPredicted RBP6.74□□□□□ -1.33
VPS26A-208ENST00000497022 KIF4AO95239 1232 aa6.74□□□□□ -1.33
VPS26A-208ENST00000497022 C16orf46Q6P387 395 aa6.74□□□□□ -1.33
VPS26A-208ENST00000497022 ABI1Q8IZP0 508 aa6.74□□□□□ -1.33
VPS26A-208ENST00000497022 MKNK1Q9BUB5 465 aa6.74□□□□□ -1.33
VPS26A-208ENST00000497022 CARD10Q9BWT7 1032 aa6.74□□□□□ -1.33
VPS26A-208ENST00000497022 RNF208Q9H0X6 261 aa6.74□□□□□ -1.33
VPS26A-208ENST00000497022 KCNF1Q9H3M0 494 aa6.74□□□□□ -1.33
VPS26A-208ENST00000497022 SEC31BQ9NQW1 1179 aa6.74□□□□□ -1.33
VPS26A-208ENST00000497022 ANGEL1Q9UNK9 670 aaKnown RBP6.74□□□□□ -1.33
VPS26A-208ENST00000497022 WDR64B1ANS9 1081 aa6.73□□□□□ -1.33
VPS26A-208ENST00000497022 UBAP1LF5GYI3 381 aa6.73□□□□□ -1.33
VPS26A-208ENST00000497022 ADAM11O75078 769 aa6.73□□□□□ -1.33
VPS26A-208ENST00000497022 PTPRAP18433 802 aa6.73□□□□□ -1.33
VPS26A-208ENST00000497022 BRD2P25440 801 aaKnown RBP6.73□□□□□ -1.33
VPS26A-208ENST00000497022 PREPP48147 710 aa6.73□□□□□ -1.33
VPS26A-208ENST00000497022 COL13A1Q5TAT6 717 aaPredicted RBP6.73□□□□□ -1.33
VPS26A-208ENST00000497022 OGFOD2Q6N063 350 aa6.73□□□□□ -1.33
VPS26A-208ENST00000497022 ETFBKMTQ8IXQ9 262 aa6.73□□□□□ -1.33
VPS26A-208ENST00000497022 UBASH3BQ8TF42 649 aa6.73□□□□□ -1.33
VPS26A-208ENST00000497022 PIK3R5Q8WYR1 880 aa6.73□□□□□ -1.33
VPS26A-208ENST00000497022 KRTAP4-9Q9BYQ8 210 aa6.73□□□□□ -1.33
VPS26A-208ENST00000497022 EPHA1P21709 976 aa6.72□□□□□ -1.33
VPS26A-208ENST00000497022 ATP2B4P23634 1241 aa6.72□□□□□ -1.33
VPS26A-208ENST00000497022 PIP4K2BP78356 416 aa6.72□□□□□ -1.33
VPS26A-208ENST00000497022 NAA30Q147X3 362 aaPredicted RBP6.72□□□□□ -1.33
VPS26A-208ENST00000497022 MSMPQ1L6U9 139 aa6.72□□□□□ -1.33
VPS26A-208ENST00000497022 CBLL1Q75N03 491 aa6.72□□□□□ -1.33
VPS26A-208ENST00000497022 POU5F2Q8N7G0 328 aa6.72□□□□□ -1.33
VPS26A-208ENST00000497022 ASIC4Q96FT7 647 aa6.72□□□□□ -1.33
VPS26A-208ENST00000497022 PBX4Q9BYU1 374 aa6.72□□□□□ -1.33
VPS26A-208ENST00000497022 ADAM19Q9H013 955 aa6.72□□□□□ -1.33
VPS26A-208ENST00000497022 RASSF4Q9H2L5 321 aa6.72□□□□□ -1.33
VPS26A-208ENST00000497022 OSGEPQ9NPF4 335 aa6.72□□□□□ -1.33
VPS26A-208ENST00000497022 FNDC3AQ9Y2H6 1198 aaKnown RBP6.72□□□□□ -1.33
VPS26A-208ENST00000497022 H3BRJ5 948 aa6.71□□□□□ -1.34
VPS26A-208ENST00000497022 PRNPP04156 253 aa6.71□□□□□ -1.34
VPS26A-208ENST00000497022 HOXA10P31260 410 aaPredicted RBP6.71□□□□□ -1.34
VPS26A-208ENST00000497022 SCNN1AP37088 669 aa6.71□□□□□ -1.34
VPS26A-208ENST00000497022 FAM26DQ5JW98 314 aa6.71□□□□□ -1.34
VPS26A-208ENST00000497022 TTC39BQ5VTQ0 682 aaPredicted RBP6.71□□□□□ -1.34
VPS26A-208ENST00000497022 FDX2Q6P4F2 183 aa6.71□□□□□ -1.34
VPS26A-208ENST00000497022 KLHDC7BQ96G42 594 aa6.71□□□□□ -1.34
VPS26A-208ENST00000497022 TNFRSF10BO14763 440 aa6.7□□□□□ -1.34
VPS26A-208ENST00000497022 DDX3YO15523 660 aaKnown RBP6.7□□□□□ -1.34
VPS26A-208ENST00000497022 FOSL1P15407 271 aa6.7□□□□□ -1.34
VPS26A-208ENST00000497022 CDC25BP30305 580 aa6.7□□□□□ -1.34
VPS26A-208ENST00000497022 CABP4P57796 275 aa6.7□□□□□ -1.34
VPS26A-208ENST00000497022 ADAMTSL4Q6UY14 1074 aa6.7□□□□□ -1.34
VPS26A-208ENST00000497022 ERICH6Q7L0X2 663 aa6.7□□□□□ -1.34
VPS26A-208ENST00000497022 VSIG10LQ86VR7 867 aa6.7□□□□□ -1.34
VPS26A-208ENST00000497022 MFSD14AQ96MC6 490 aa6.7□□□□□ -1.34
VPS26A-208ENST00000497022 FBXL18Q96ME1 805 aa6.7□□□□□ -1.34
VPS26A-208ENST00000497022 ATG3Q9NT62 314 aa6.7□□□□□ -1.34
VPS26A-208ENST00000497022 LEMD3Q9Y2U8 911 aa6.7□□□□□ -1.34
VPS26A-208ENST00000497022 TMEM88BA6NKF7 163 aa6.69□□□□□ -1.34
VPS26A-208ENST00000497022 GAS2O43903 313 aaKnown RBP6.69□□□□□ -1.34
VPS26A-208ENST00000497022 JUNBP17275 347 aaPredicted RBP6.69□□□□□ -1.34
VPS26A-208ENST00000497022 CEP120Q8N960 986 aa6.69□□□□□ -1.34
VPS26A-208ENST00000497022 RUSC1Q9BVN2 902 aa6.69□□□□□ -1.34
VPS26A-208ENST00000497022 SH2B1Q9NRF2 756 aaPredicted RBP6.69□□□□□ -1.34
VPS26A-208ENST00000497022 ABI2Q9NYB9 513 aaPredicted RBP6.69□□□□□ -1.34
VPS26A-208ENST00000497022 CCDC39Q9UFE4 941 aa6.69□□□□□ -1.34
VPS26A-208ENST00000497022 SEPT3Q9UH03 358 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms