RNA–Protein interactions for RNA: ENST00000496896.1

TRIM4-205, Transcript of tripartite motif containing 4, humanhuman

TSL 5

Gene TRIM4, Length 601 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-205ENST00000496896 TP53INP1Q96A56 240 aa8.2□□□□□ -1.1
TRIM4-205ENST00000496896 MUC3BQ9H195 1237 aa8.2□□□□□ -1.1
TRIM4-205ENST00000496896 YBX3P16989 372 aaKnown RBP eCLIP8.19□□□□□ -1.1
TRIM4-205ENST00000496896 NRG1Q02297 640 aaPredicted RBP8.19□□□□□ -1.1
TRIM4-205ENST00000496896 MAP4K3Q8IVH8 894 aa8.19□□□□□ -1.1
TRIM4-205ENST00000496896 GLYCTKQ8IVS8 523 aa8.19□□□□□ -1.1
TRIM4-205ENST00000496896 CCER1Q8TC90 406 aaPredicted RBP8.19□□□□□ -1.1
TRIM4-205ENST00000496896 LENG1Q96BZ8 264 aaPredicted RBP8.19□□□□□ -1.1
TRIM4-205ENST00000496896 KRTAP4-7Q9BYR0 210 aa8.19□□□□□ -1.1
TRIM4-205ENST00000496896 ANO2Q9NQ90 1003 aa8.19□□□□□ -1.1
TRIM4-205ENST00000496896 CNTN3Q9P232 1028 aa8.19□□□□□ -1.1
TRIM4-205ENST00000496896 SALL4Q9UJQ4 1053 aa8.19□□□□□ -1.1
TRIM4-205ENST00000496896 GNEQ9Y223 722 aaKnown RBP8.19□□□□□ -1.1
TRIM4-205ENST00000496896 H3BRB1 525 aa8.18□□□□□ -1.1
TRIM4-205ENST00000496896 SMNDC1O75940 238 aaKnown RBP eCLIP8.18□□□□□ -1.1
TRIM4-205ENST00000496896 CYP2E1P05181 493 aaPredicted RBP8.18□□□□□ -1.1
TRIM4-205ENST00000496896 SELPP16109 830 aa8.18□□□□□ -1.1
TRIM4-205ENST00000496896 CES1P23141 567 aa8.18□□□□□ -1.1
TRIM4-205ENST00000496896 NCAPG2Q86XI2 1143 aa8.18□□□□□ -1.1
TRIM4-205ENST00000496896 SNX29Q8TEQ0 813 aa8.18□□□□□ -1.1
TRIM4-205ENST00000496896 CHRDQ9H2X0 955 aa8.18□□□□□ -1.1
TRIM4-205ENST00000496896 TUT1Q9H6E5 874 aaKnown RBP8.18□□□□□ -1.1
TRIM4-205ENST00000496896 TNFRSF21O75509 655 aa8.17□□□□□ -1.1
TRIM4-205ENST00000496896 ARHGAP4P98171 946 aa8.17□□□□□ -1.1
TRIM4-205ENST00000496896 LCE1DQ5T752 114 aa8.17□□□□□ -1.1
TRIM4-205ENST00000496896 C1orf127Q8N9H9 656 aa8.17□□□□□ -1.1
TRIM4-205ENST00000496896 CITED4Q96RK1 184 aa8.17□□□□□ -1.1
TRIM4-205ENST00000496896 PBX4Q9BYU1 374 aa8.17□□□□□ -1.1
TRIM4-205ENST00000496896 CCDC87Q9NVE4 849 aa8.17□□□□□ -1.1
TRIM4-205ENST00000496896 RNF112Q9ULX5 631 aa8.17□□□□□ -1.1
TRIM4-205ENST00000496896 COL17A1Q9UMD9 1497 aaPredicted RBP8.17□□□□□ -1.1
TRIM4-205ENST00000496896 IL22RA1Q8N6P7 574 aa8.16□□□□□ -1.1
TRIM4-205ENST00000496896 TRIM33Q9UPN9 1127 aa8.16□□□□□ -1.1
TRIM4-205ENST00000496896 A6NHS1 94 aa8.15□□□□□ -1.1
TRIM4-205ENST00000496896 ATP11AP98196 1134 aa8.15□□□□□ -1.1
TRIM4-205ENST00000496896 GDF6Q6KF10 455 aaPredicted RBP8.15□□□□□ -1.1
TRIM4-205ENST00000496896 IGF2-ASQ6U949 168 aa8.15□□□□□ -1.1
TRIM4-205ENST00000496896 RASSF4Q9H2L5 321 aa8.15□□□□□ -1.1
TRIM4-205ENST00000496896 BRPF3Q9ULD4 1205 aa8.15□□□□□ -1.1
TRIM4-205ENST00000496896 DLL1O00548 723 aa8.14□□□□□ -1.11
TRIM4-205ENST00000496896 NDUFB5O43674 189 aa8.14□□□□□ -1.11
TRIM4-205ENST00000496896 PHACTR2O75167 634 aa8.14□□□□□ -1.11
TRIM4-205ENST00000496896 DEAF1O75398 565 aaPredicted RBP8.14□□□□□ -1.11
TRIM4-205ENST00000496896 PDE3BQ13370 1112 aa8.14□□□□□ -1.11
TRIM4-205ENST00000496896 CEP135Q66GS9 1140 aa8.14□□□□□ -1.11
TRIM4-205ENST00000496896 FMNL2Q96PY5 1086 aa8.14□□□□□ -1.11
TRIM4-205ENST00000496896 ADAM19Q9H013 955 aa8.14□□□□□ -1.11
TRIM4-205ENST00000496896 KANSL3Q9P2N6 904 aa8.14□□□□□ -1.11
TRIM4-205ENST00000496896 PPME1Q9Y570 386 aa8.14□□□□□ -1.11
TRIM4-205ENST00000496896 EDN3P14138 238 aa8.13□□□□□ -1.11
TRIM4-205ENST00000496896 PTPRAP18433 802 aa8.13□□□□□ -1.11
TRIM4-205ENST00000496896 SSBP4Q9BWG4 385 aaPredicted RBP8.13□□□□□ -1.11
TRIM4-205ENST00000496896 DZANK1Q9NVP4 752 aa8.13□□□□□ -1.11
TRIM4-205ENST00000496896 NFKBIEO00221 500 aa8.12□□□□□ -1.11
TRIM4-205ENST00000496896 NEFLP07196 543 aa8.12□□□□□ -1.11
TRIM4-205ENST00000496896 CDC27P30260 824 aa8.12□□□□□ -1.11
TRIM4-205ENST00000496896 SETDB1Q15047 1291 aa8.12□□□□□ -1.11
TRIM4-205ENST00000496896 SHISA2Q6UWI4 295 aa8.12□□□□□ -1.11
TRIM4-205ENST00000496896 FAM129BQ96TA1 746 aa8.12□□□□□ -1.11
TRIM4-205ENST00000496896 POP1Q99575 1024 aaKnown RBP8.12□□□□□ -1.11
TRIM4-205ENST00000496896 SOWAHDA6NJG2 315 aa8.11□□□□□ -1.11
TRIM4-205ENST00000496896 EREGO14944 169 aa8.11□□□□□ -1.11
TRIM4-205ENST00000496896 TMEM102Q8N9M5 508 aaPredicted RBP8.11□□□□□ -1.11
TRIM4-205ENST00000496896 ZFYVE28Q9HCC9 887 aa8.11□□□□□ -1.11
TRIM4-205ENST00000496896 PCMTD2Q9NV79 361 aa8.11□□□□□ -1.11
TRIM4-205ENST00000496896 USP21Q9UK80 565 aa8.11□□□□□ -1.11
TRIM4-205ENST00000496896 AMOTL2Q9Y2J4 779 aa8.11□□□□□ -1.11
TRIM4-205ENST00000496896 FAM177BA6PVY3 158 aa8.1□□□□□ -1.11
TRIM4-205ENST00000496896 TMEM130Q8N3G9 435 aa8.1□□□□□ -1.11
TRIM4-205ENST00000496896 WNT8BQ93098 351 aa8.1□□□□□ -1.11
TRIM4-205ENST00000496896 FOXD3Q9UJU5 478 aaPredicted RBP8.1□□□□□ -1.11
TRIM4-205ENST00000496896 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.1□□□□□ -1.11
TRIM4-205ENST00000496896 PDE2AO00408 941 aaPredicted RBP8.09□□□□□ -1.11
TRIM4-205ENST00000496896 KCNA1Q09470 495 aa8.09□□□□□ -1.11
TRIM4-205ENST00000496896 TRAIPQ9BWF2 469 aa8.09□□□□□ -1.11
TRIM4-205ENST00000496896 RBCK1Q9BYM8 510 aa8.09□□□□□ -1.11
TRIM4-205ENST00000496896 LACRTQ9GZZ8 138 aa8.09□□□□□ -1.11
TRIM4-205ENST00000496896 MRPL18Q9H0U6 180 aaKnown RBP8.09□□□□□ -1.11
TRIM4-205ENST00000496896 IGHA2P01877 340 aa8.08□□□□□ -1.12
TRIM4-205ENST00000496896 FAM117BQ6P1L5 589 aa8.08□□□□□ -1.12
TRIM4-205ENST00000496896 KLHL23Q8NBE8 558 aa8.08□□□□□ -1.12
TRIM4-205ENST00000496896 NXPE3Q969Y0 559 aa8.08□□□□□ -1.12
TRIM4-205ENST00000496896 OSMRQ99650 979 aa8.08□□□□□ -1.12
TRIM4-205ENST00000496896 BHLHE41Q9C0J9 482 aaPredicted RBP8.08□□□□□ -1.12
TRIM4-205ENST00000496896 TM4SF5O14894 197 aa8.07□□□□□ -1.12
TRIM4-205ENST00000496896 EPHA1P21709 976 aa8.07□□□□□ -1.12
TRIM4-205ENST00000496896 CABP4P57796 275 aa8.07□□□□□ -1.12
TRIM4-205ENST00000496896 PEAR1Q5VY43 1037 aaPredicted RBP8.07□□□□□ -1.12
TRIM4-205ENST00000496896 ADAMTSL4Q6UY14 1074 aa8.07□□□□□ -1.12
TRIM4-205ENST00000496896 ALKBH8Q96BT7 664 aaKnown RBP8.07□□□□□ -1.12
TRIM4-205ENST00000496896 DMRTB1Q96MA1 342 aa8.07□□□□□ -1.12
TRIM4-205ENST00000496896 ZKSCAN3Q9BRR0 538 aa8.07□□□□□ -1.12
TRIM4-205ENST00000496896 SOX13Q9UN79 622 aa8.07□□□□□ -1.12
TRIM4-205ENST00000496896 ARID1BQ8NFD5 2236 aaPredicted RBP8.06□□□□□ -1.12
TRIM4-205ENST00000496896 PATL2C9JE40 543 aaKnown RBP8.06□□□□□ -1.12
TRIM4-205ENST00000496896 H3BRJ5 948 aa8.06□□□□□ -1.12
TRIM4-205ENST00000496896 LINC01387J3KSC0 135 aa8.06□□□□□ -1.12
TRIM4-205ENST00000496896 FSCN2O14926 492 aa8.06□□□□□ -1.12
TRIM4-205ENST00000496896 ACPPP15309 386 aa8.06□□□□□ -1.12
TRIM4-205ENST00000496896 IRAK1P51617 712 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms