RNA–Protein interactions for RNA: ENST00000496524.5

NPHP1-211, Transcript of nephrocystin 1, humanhuman

TSL 2

Gene NPHP1, Length 10,006 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-211ENST00000496524 MTHFSP49914 203 aa9.25□□□□□ -0.93
NPHP1-211ENST00000496524 PNMA8AQ86V59 439 aaPredicted RBP9.25□□□□□ -0.93
NPHP1-211ENST00000496524 NEK11Q8NG66 645 aa9.25□□□□□ -0.93
NPHP1-211ENST00000496524 HCLS1P14317 486 aaPredicted RBP9.25□□□□□ -0.93
NPHP1-211ENST00000496524 CCDC186Q7Z3E2 898 aa9.25□□□□□ -0.93
NPHP1-211ENST00000496524 C11orf95C9JLR9 678 aaPredicted RBP9.24□□□□□ -0.93
NPHP1-211ENST00000496524 WDR46O15213 610 aaKnown RBP9.24□□□□□ -0.93
NPHP1-211ENST00000496524 GJB2P29033 226 aa9.24□□□□□ -0.93
NPHP1-211ENST00000496524 VWA3BQ502W6 1294 aa9.24□□□□□ -0.93
NPHP1-211ENST00000496524 CAVIN4Q5BKX8 364 aa9.24□□□□□ -0.93
NPHP1-211ENST00000496524 MORC4Q8TE76 937 aa9.24□□□□□ -0.93
NPHP1-211ENST00000496524 CCDC68Q9H2F9 335 aa9.24□□□□□ -0.93
NPHP1-211ENST00000496524 EVI5O60447 810 aa9.24□□□□□ -0.93
NPHP1-211ENST00000496524 EVCP57679 992 aa9.24□□□□□ -0.93
NPHP1-211ENST00000496524 PAXIP1Q6ZW49 1069 aaPredicted RBP9.24□□□□□ -0.93
NPHP1-211ENST00000496524 CCDC25Q86WR0 208 aa9.24□□□□□ -0.93
NPHP1-211ENST00000496524 CCDC124Q96CT7 223 aaKnown RBP9.24□□□□□ -0.93
NPHP1-211ENST00000496524 NRBF2Q96F24 287 aa9.24□□□□□ -0.93
NPHP1-211ENST00000496524 RNF216Q9NWF9 866 aaPredicted RBP9.24□□□□□ -0.93
NPHP1-211ENST00000496524 PSMD6Q15008 389 aa9.24□□□□□ -0.93
NPHP1-211ENST00000496524 TMTC2Q8N394 836 aa9.24□□□□□ -0.93
NPHP1-211ENST00000496524 USP6NLQ92738 828 aa9.24□□□□□ -0.93
NPHP1-211ENST00000496524 BAIAP2L1Q9UHR4 511 aa9.24□□□□□ -0.93
NPHP1-211ENST00000496524 TRHP20396 242 aaPredicted RBP9.24□□□□□ -0.93
NPHP1-211ENST00000496524 VEZTQ9HBM0 779 aa9.24□□□□□ -0.93
NPHP1-211ENST00000496524 CTTNBP2NLQ9P2B4 639 aa9.24□□□□□ -0.93
NPHP1-211ENST00000496524 CUL4BQ13620 913 aa9.24□□□□□ -0.93
NPHP1-211ENST00000496524 RPGRIP1Q96KN7 1286 aa9.24□□□□□ -0.93
NPHP1-211ENST00000496524 PHACTR2O75167 634 aa9.24□□□□□ -0.93
NPHP1-211ENST00000496524 BIN1O00499 593 aa9.24□□□□□ -0.93
NPHP1-211ENST00000496524 IDH1O75874 414 aaKnown RBP9.24□□□□□ -0.93
NPHP1-211ENST00000496524 ZKSCAN8Q15776 578 aaPredicted RBP9.24□□□□□ -0.93
NPHP1-211ENST00000496524 ZNF569Q5MCW4 686 aa9.24□□□□□ -0.93
NPHP1-211ENST00000496524 KANK4Q5T7N3 995 aaPredicted RBP9.24□□□□□ -0.93
NPHP1-211ENST00000496524 TROVE2P10155 538 aaKnown RBP eCLIP9.23□□□□□ -0.93
NPHP1-211ENST00000496524 LMNB2Q03252 620 aa9.23□□□□□ -0.93
NPHP1-211ENST00000496524 STAG1Q8WVM7 1258 aa9.23□□□□□ -0.93
NPHP1-211ENST00000496524 RAD50Q92878 1312 aa9.23□□□□□ -0.93
NPHP1-211ENST00000496524 TMEM57Q8N5G2 664 aa9.23□□□□□ -0.93
NPHP1-211ENST00000496524 GOLGA6BA6NDN3 693 aa9.23□□□□□ -0.93
NPHP1-211ENST00000496524 ARHGAP4P98171 946 aa9.23□□□□□ -0.93
NPHP1-211ENST00000496524 KLHDC4Q8TBB5 520 aa9.23□□□□□ -0.93
NPHP1-211ENST00000496524 POLR3DP05423 398 aaPredicted RBP9.23□□□□□ -0.93
NPHP1-211ENST00000496524 C8orf74Q6P047 294 aa9.23□□□□□ -0.93
NPHP1-211ENST00000496524 TTF2Q9UNY4 1162 aaKnown RBP9.23□□□□□ -0.93
NPHP1-211ENST00000496524 SSFA2P28290 1259 aa9.23□□□□□ -0.93
NPHP1-211ENST00000496524 EVI5LQ96CN4 794 aa9.23□□□□□ -0.93
NPHP1-211ENST00000496524 TSKSQ9UJT2 592 aa9.23□□□□□ -0.93
NPHP1-211ENST00000496524 IFIT3O14879 490 aaKnown RBP9.23□□□□□ -0.93
NPHP1-211ENST00000496524 ZSCAN22P10073 491 aaPredicted RBP9.23□□□□□ -0.93
NPHP1-211ENST00000496524 EEF2P13639 858 aaKnown RBP9.23□□□□□ -0.93
NPHP1-211ENST00000496524 PHEXP78562 749 aa9.23□□□□□ -0.93
NPHP1-211ENST00000496524 LRRC43Q8N309 656 aa9.23□□□□□ -0.93
NPHP1-211ENST00000496524 KIFAP3Q92845 792 aa9.23□□□□□ -0.93
NPHP1-211ENST00000496524 STK10O94804 968 aaKnown RBP9.23□□□□□ -0.93
NPHP1-211ENST00000496524 RHOXF2BP0C7M4 288 aa9.23□□□□□ -0.93
NPHP1-211ENST00000496524 BRD2P25440 801 aaKnown RBP9.23□□□□□ -0.93
NPHP1-211ENST00000496524 TRIM60Q495X7 471 aa9.23□□□□□ -0.93
NPHP1-211ENST00000496524 RHOXF2Q9BQY4 288 aa9.23□□□□□ -0.93
NPHP1-211ENST00000496524 ANKFY1Q9P2R3 1169 aa9.23□□□□□ -0.93
NPHP1-211ENST00000496524 HPDP32754 393 aaPredicted RBP9.22□□□□□ -0.93
NPHP1-211ENST00000496524 RAP1GDS1P52306 607 aa9.22□□□□□ -0.93
NPHP1-211ENST00000496524 UBL4BQ8N7F7 174 aa9.22□□□□□ -0.93
NPHP1-211ENST00000496524 TBC1D2Q9BYX2 928 aa9.22□□□□□ -0.93
NPHP1-211ENST00000496524 SMIM23A6NLE4 172 aa9.22□□□□□ -0.93
NPHP1-211ENST00000496524 TPX2Q9ULW0 747 aaKnown RBP9.22□□□□□ -0.93
NPHP1-211ENST00000496524 POTEB3A0JP26 581 aa9.22□□□□□ -0.93
NPHP1-211ENST00000496524 ATL3Q6DD88 541 aa9.22□□□□□ -0.93
NPHP1-211ENST00000496524 PRPF40BQ6NWY9 871 aaKnown RBP9.22□□□□□ -0.93
NPHP1-211ENST00000496524 POTEBQ6S5H4 581 aa9.22□□□□□ -0.93
NPHP1-211ENST00000496524 GTF3C6Q969F1 213 aa9.22□□□□□ -0.93
NPHP1-211ENST00000496524 AKNAQ7Z591 1439 aa9.22□□□□□ -0.93
NPHP1-211ENST00000496524 MAN1A2O60476 641 aa9.22□□□□□ -0.93
NPHP1-211ENST00000496524 FAM160A1Q05DH4 1040 aa9.22□□□□□ -0.93
NPHP1-211ENST00000496524 HHATQ5VTY9 493 aa9.22□□□□□ -0.93
NPHP1-211ENST00000496524 KLHL14Q9P2G3 628 aa9.22□□□□□ -0.93
NPHP1-211ENST00000496524 GUCA1BQ9UMX6 200 aa9.22□□□□□ -0.93
NPHP1-211ENST00000496524 PPP1R21Q6ZMI0 780 aa9.22□□□□□ -0.93
NPHP1-211ENST00000496524 APOEP02649 317 aa9.22□□□□□ -0.93
NPHP1-211ENST00000496524 PPP2R5EQ16537 467 aa9.22□□□□□ -0.93
NPHP1-211ENST00000496524 ZSCAN26Q16670 478 aa9.22□□□□□ -0.93
NPHP1-211ENST00000496524 CCDC92Q53HC0 331 aaPredicted RBP9.22□□□□□ -0.93
NPHP1-211ENST00000496524 CRACR2BQ8N4Y2 399 aaPredicted RBP9.22□□□□□ -0.93
NPHP1-211ENST00000496524 P3H4Q92791 437 aa9.22□□□□□ -0.93
NPHP1-211ENST00000496524 PAWRQ96IZ0 340 aaKnown RBP9.22□□□□□ -0.93
NPHP1-211ENST00000496524 DAAM1Q9Y4D1 1078 aa9.22□□□□□ -0.93
NPHP1-211ENST00000496524 E7EVH7 732 aa9.22□□□□□ -0.93
NPHP1-211ENST00000496524 RRAGBQ5VZM2 374 aa9.22□□□□□ -0.93
NPHP1-211ENST00000496524 PPP4R1Q8TF05 950 aa9.22□□□□□ -0.93
NPHP1-211ENST00000496524 IMPACTQ9P2X3 320 aa9.22□□□□□ -0.93
NPHP1-211ENST00000496524 EPS15L1Q9UBC2 864 aa9.22□□□□□ -0.93
NPHP1-211ENST00000496524 DEUP1Q05D60 604 aa9.22□□□□□ -0.93
NPHP1-211ENST00000496524 CCDC122Q5T0U0 273 aa9.22□□□□□ -0.93
NPHP1-211ENST00000496524 NAPGQ99747 312 aaPredicted RBP9.22□□□□□ -0.93
NPHP1-211ENST00000496524 MINDY4BA8MYZ0 360 aa9.21□□□□□ -0.93
NPHP1-211ENST00000496524 SNCBQ16143 134 aa9.21□□□□□ -0.93
NPHP1-211ENST00000496524 TATP17735 454 aaPredicted RBP9.21□□□□□ -0.93
NPHP1-211ENST00000496524 MX2P20592 715 aa9.21□□□□□ -0.93
NPHP1-211ENST00000496524 PDE4BQ07343 736 aa9.21□□□□□ -0.93
NPHP1-211ENST00000496524 NCBP1Q09161 790 aaKnown RBP9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms