RNA–Protein interactions for RNA: ENST00000496466.1

UBXN11-216, Transcript of UBX domain protein 11, humanhuman

TSL 2

Gene UBXN11, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-216ENST00000496466 LEO1Q8WVC0 666 aaPredicted RBP17.64■□□□□ 0.41
UBXN11-216ENST00000496466 SPATA32Q96LK8 384 aa17.64■□□□□ 0.41
UBXN11-216ENST00000496466 RESTQ13127 1097 aa17.64■□□□□ 0.41
UBXN11-216ENST00000496466 WNK3Q9BYP7 1800 aa17.63■□□□□ 0.41
UBXN11-216ENST00000496466 NUTM2BA6NNL0 878 aaPredicted RBP17.63■□□□□ 0.41
UBXN11-216ENST00000496466 NUTM2EB1AL46 878 aaPredicted RBP17.63■□□□□ 0.41
UBXN11-216ENST00000496466 RNF113AO15541 343 aaKnown RBP17.63■□□□□ 0.41
UBXN11-216ENST00000496466 PFKFB2O60825 505 aa17.63■□□□□ 0.41
UBXN11-216ENST00000496466 DDB1Q16531 1140 aa17.63■□□□□ 0.41
UBXN11-216ENST00000496466 NUTM2AQ8IVF1 878 aaPredicted RBP17.63■□□□□ 0.41
UBXN11-216ENST00000496466 SMARCC2Q8TAQ2 1214 aa17.63■□□□□ 0.41
UBXN11-216ENST00000496466 ACSBG1Q96GR2 724 aa17.63■□□□□ 0.41
UBXN11-216ENST00000496466 LTBP4Q8N2S1 1624 aa17.63■□□□□ 0.41
UBXN11-216ENST00000496466 CCDC192P0DO97 292 aa17.63■□□□□ 0.41
UBXN11-216ENST00000496466 HSPD1P10809 573 aaKnown RBP17.63■□□□□ 0.41
UBXN11-216ENST00000496466 TERF1P54274 439 aa17.63■□□□□ 0.41
UBXN11-216ENST00000496466 EXOSC10Q01780 885 aaKnown RBP17.63■□□□□ 0.41
UBXN11-216ENST00000496466 HSP90AB3PQ58FF7 597 aa17.63■□□□□ 0.41
UBXN11-216ENST00000496466 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.63■□□□□ 0.41
UBXN11-216ENST00000496466 DDX11Q96FC9 970 aa17.63■□□□□ 0.41
UBXN11-216ENST00000496466 NUP62CLQ9H1M0 184 aa17.63■□□□□ 0.41
UBXN11-216ENST00000496466 GREM2Q9H772 168 aa17.63■□□□□ 0.41
UBXN11-216ENST00000496466 CDHR2Q9BYE9 1310 aa17.63■□□□□ 0.41
UBXN11-216ENST00000496466 MAST3O60307 1309 aa17.62■□□□□ 0.41
UBXN11-216ENST00000496466 FGD1P98174 961 aa17.62■□□□□ 0.41
UBXN11-216ENST00000496466 DZIP3Q86Y13 1208 aaKnown RBP17.62■□□□□ 0.41
UBXN11-216ENST00000496466 TTLL11Q8NHH1 800 aa17.62■□□□□ 0.41
UBXN11-216ENST00000496466 DOT1LQ8TEK3 1739 aa17.62■□□□□ 0.41
UBXN11-216ENST00000496466 XAGE2Q96GT9 111 aa17.62■□□□□ 0.41
UBXN11-216ENST00000496466 LLPHQ9BRT6 129 aaKnown RBP17.62■□□□□ 0.41
UBXN11-216ENST00000496466 FBXO3Q9UK99 471 aa17.62■□□□□ 0.41
UBXN11-216ENST00000496466 R3HCC1Q9Y3T6 440 aaKnown RBP17.62■□□□□ 0.41
UBXN11-216ENST00000496466 SPEF2Q9C093 1822 aa17.62■□□□□ 0.41
UBXN11-216ENST00000496466 A0A0G2JLW4 131 aa17.61■□□□□ 0.41
UBXN11-216ENST00000496466 MAP3K11Q16584 847 aa17.61■□□□□ 0.41
UBXN11-216ENST00000496466 MPNDQ8N594 471 aa17.61■□□□□ 0.41
UBXN11-216ENST00000496466 CDCA7Q9BWT1 371 aaPredicted RBP17.61■□□□□ 0.41
UBXN11-216ENST00000496466 TRMT112Q9UI30 125 aaKnown RBP17.61■□□□□ 0.41
UBXN11-216ENST00000496466 GOLGA6L4A6NEF3 574 aa17.61■□□□□ 0.41
UBXN11-216ENST00000496466 H3BQV1 296 aa17.61■□□□□ 0.41
UBXN11-216ENST00000496466 IRS4O14654 1257 aaPredicted RBP17.61■□□□□ 0.41
UBXN11-216ENST00000496466 AP5Z1O43299 807 aa17.61■□□□□ 0.41
UBXN11-216ENST00000496466 ITGA6P23229 1130 aa17.61■□□□□ 0.41
UBXN11-216ENST00000496466 IL6STP40189 918 aaPredicted RBP17.61■□□□□ 0.41
UBXN11-216ENST00000496466 IFFO2Q5TF58 517 aa17.61■□□□□ 0.41
UBXN11-216ENST00000496466 MARCH10Q8NA82 808 aaPredicted RBP17.61■□□□□ 0.41
UBXN11-216ENST00000496466 AGXT2Q9BYV1 514 aa17.61■□□□□ 0.41
UBXN11-216ENST00000496466 AKAP2Q9Y2D5 859 aa17.61■□□□□ 0.41
UBXN11-216ENST00000496466 E7EWF7 191 aa17.6■□□□□ 0.41
UBXN11-216ENST00000496466 M0R2C6 588 aa17.6■□□□□ 0.41
UBXN11-216ENST00000496466 FKBP4Q02790 459 aaKnown RBP eCLIP17.6■□□□□ 0.41
UBXN11-216ENST00000496466 APOBRQ0VD83 1088 aa17.6■□□□□ 0.41
UBXN11-216ENST00000496466 KIAA2012Q0VF49 1180 aa17.6■□□□□ 0.41
UBXN11-216ENST00000496466 CAMK4Q16566 473 aa17.6■□□□□ 0.41
UBXN11-216ENST00000496466 GORABQ5T7V8 394 aa17.6■□□□□ 0.41
UBXN11-216ENST00000496466 NSUN7Q8NE18 718 aaKnown RBP17.6■□□□□ 0.41
UBXN11-216ENST00000496466 DACT1Q9NYF0 836 aa17.6■□□□□ 0.41
UBXN11-216ENST00000496466 UBN2Q6ZU65 1347 aa17.6■□□□□ 0.41
UBXN11-216ENST00000496466 CTSWP56202 376 aa17.6■□□□□ 0.41
UBXN11-216ENST00000496466 CCDC158Q5M9N0 1113 aa17.6■□□□□ 0.41
UBXN11-216ENST00000496466 TTC39AQ5SRH9 613 aa17.6■□□□□ 0.41
UBXN11-216ENST00000496466 PGBD1Q96JS3 809 aa17.6■□□□□ 0.41
UBXN11-216ENST00000496466 ZSCAN16Q9H4T2 348 aaPredicted RBP17.6■□□□□ 0.41
UBXN11-216ENST00000496466 PHLPP1O60346 1717 aa17.6■□□□□ 0.41
UBXN11-216ENST00000496466 ERVV-1B6SEH8 477 aa17.59■□□□□ 0.41
UBXN11-216ENST00000496466 CTDNEP1O95476 244 aa17.59■□□□□ 0.41
UBXN11-216ENST00000496466 SCARF1Q14162 830 aa17.59■□□□□ 0.41
UBXN11-216ENST00000496466 ZNF830Q96NB3 372 aaPredicted RBP17.59■□□□□ 0.41
UBXN11-216ENST00000496466 THRAP3Q9Y2W1 955 aaKnown RBP17.59■□□□□ 0.41
UBXN11-216ENST00000496466 RIPOR2Q9Y4F9 1068 aa17.59■□□□□ 0.41
UBXN11-216ENST00000496466 NRAPQ86VF7 1730 aa17.59■□□□□ 0.41
UBXN11-216ENST00000496466 INTS5Q6P9B9 1019 aaKnown RBP17.59■□□□□ 0.41
UBXN11-216ENST00000496466 LDHAL6AQ6ZMR3 332 aa17.59■□□□□ 0.41
UBXN11-216ENST00000496466 DDX19AQ9NUU7 478 aaKnown RBP17.59■□□□□ 0.41
UBXN11-216ENST00000496466 MRVI1Q9Y6F6 885 aa17.59■□□□□ 0.41
UBXN11-216ENST00000496466 RIC1Q4ADV7 1423 aa17.59■□□□□ 0.41
UBXN11-216ENST00000496466 PIP4K2BP78356 416 aa17.58■□□□□ 0.41
UBXN11-216ENST00000496466 TYRO3Q06418 890 aa17.58■□□□□ 0.41
UBXN11-216ENST00000496466 METTL24Q5JXM2 366 aa17.58■□□□□ 0.41
UBXN11-216ENST00000496466 OSBP2Q969R2 916 aa17.58■□□□□ 0.41
UBXN11-216ENST00000496466 TNMDQ9H2S6 317 aa17.58■□□□□ 0.41
UBXN11-216ENST00000496466 CLSTN2Q9H4D0 955 aa17.58■□□□□ 0.41
UBXN11-216ENST00000496466 SPATA31A5Q5VU36 1347 aa17.58■□□□□ 0.4
UBXN11-216ENST00000496466 SPATA31A7Q8IWB4 1347 aa17.58■□□□□ 0.4
UBXN11-216ENST00000496466 ANKRD18BA2A2Z9 1011 aa17.58■□□□□ 0.4
UBXN11-216ENST00000496466 ATP6V1AP38606 617 aa17.58■□□□□ 0.4
UBXN11-216ENST00000496466 PLCB2Q00722 1185 aa17.58■□□□□ 0.4
UBXN11-216ENST00000496466 ZNF34Q8IZ26 560 aa17.58■□□□□ 0.4
UBXN11-216ENST00000496466 FAM200AQ8TCP9 573 aa17.58■□□□□ 0.4
UBXN11-216ENST00000496466 NUP98P52948 1817 aa17.57■□□□□ 0.4
UBXN11-216ENST00000496466 PTPDC1A2A3K4 754 aa17.57■□□□□ 0.4
UBXN11-216ENST00000496466 EIF5P55010 431 aaKnown RBP17.57■□□□□ 0.4
UBXN11-216ENST00000496466 TTLL5Q6EMB2 1281 aa17.57■□□□□ 0.4
UBXN11-216ENST00000496466 NAA16Q6N069 864 aaPredicted RBP17.57■□□□□ 0.4
UBXN11-216ENST00000496466 RBM43Q6ZSC3 357 aaKnown RBP17.57■□□□□ 0.4
UBXN11-216ENST00000496466 CKAP2LQ8IYA6 745 aa17.57■□□□□ 0.4
UBXN11-216ENST00000496466 ANKRD36CQ5JPF3 1778 aa17.57■□□□□ 0.4
UBXN11-216ENST00000496466 PDE8AO60658 829 aa17.56■□□□□ 0.4
UBXN11-216ENST00000496466 CCT2P78371 535 aaKnown RBP17.56■□□□□ 0.4
UBXN11-216ENST00000496466 HMGN5P82970 282 aaKnown RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms