RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 IL1RAPL2Q9NP60 686 aa10.45□□□□□ -0.74
U2AF1-212ENST00000496462 KDM3BQ7LBC6 1761 aa10.45□□□□□ -0.74
U2AF1-212ENST00000496462 C20orf194Q5TEA3 1177 aa10.45□□□□□ -0.74
U2AF1-212ENST00000496462 LRP10Q7Z4F1 713 aa10.45□□□□□ -0.74
U2AF1-212ENST00000496462 CELF1Q92879 486 aaKnown RBP10.45□□□□□ -0.74
U2AF1-212ENST00000496462 ECHDC1Q9NTX5 307 aa10.45□□□□□ -0.74
U2AF1-212ENST00000496462 ADAMTS7Q9UKP4 1686 aa10.45□□□□□ -0.74
U2AF1-212ENST00000496462 PLCG2P16885 1265 aa10.45□□□□□ -0.74
U2AF1-212ENST00000496462 HOOK2Q96ED9 719 aa10.45□□□□□ -0.74
U2AF1-212ENST00000496462 MINPP1Q9UNW1 487 aa10.45□□□□□ -0.74
U2AF1-212ENST00000496462 PA2G4Q9UQ80 394 aaKnown RBP10.45□□□□□ -0.74
U2AF1-212ENST00000496462 TNNI2P48788 182 aa10.44□□□□□ -0.74
U2AF1-212ENST00000496462 TFCP2Q12800 502 aa10.44□□□□□ -0.74
U2AF1-212ENST00000496462 RILPL2Q969X0 211 aa10.44□□□□□ -0.74
U2AF1-212ENST00000496462 FSD1Q9BTV5 496 aa10.44□□□□□ -0.74
U2AF1-212ENST00000496462 LNPKQ9C0E8 428 aa10.44□□□□□ -0.74
U2AF1-212ENST00000496462 RIC1Q4ADV7 1423 aa10.44□□□□□ -0.74
U2AF1-212ENST00000496462 FOXO4P98177 505 aa10.44□□□□□ -0.74
U2AF1-212ENST00000496462 CRY2Q49AN0 593 aa10.44□□□□□ -0.74
U2AF1-212ENST00000496462 DCTPP1Q9H773 170 aa10.44□□□□□ -0.74
U2AF1-212ENST00000496462 A0A1B0GUL7 405 aa10.43□□□□□ -0.74
U2AF1-212ENST00000496462 SLC3A2P08195 630 aaKnown RBP10.43□□□□□ -0.74
U2AF1-212ENST00000496462 TMED8Q6PL24 325 aaPredicted RBP10.43□□□□□ -0.74
U2AF1-212ENST00000496462 CHD1LQ86WJ1 897 aa10.43□□□□□ -0.74
U2AF1-212ENST00000496462 PSMD1Q99460 953 aa10.43□□□□□ -0.74
U2AF1-212ENST00000496462 ZNRF3Q9ULT6 936 aa10.43□□□□□ -0.74
U2AF1-212ENST00000496462 TAF5LO75529 589 aa10.43□□□□□ -0.74
U2AF1-212ENST00000496462 LDHBP07195 334 aaKnown RBP10.43□□□□□ -0.74
U2AF1-212ENST00000496462 C9orf131Q5VYM1 1079 aa10.43□□□□□ -0.74
U2AF1-212ENST00000496462 NACAP1Q9BZK3 213 aa10.43□□□□□ -0.74
U2AF1-212ENST00000496462 CCDC8Q9H0W5 538 aaPredicted RBP10.43□□□□□ -0.74
U2AF1-212ENST00000496462 TNNQ9UQP3 1299 aa10.43□□□□□ -0.74
U2AF1-212ENST00000496462 DAXXQ9UER7 740 aaPredicted RBP10.43□□□□□ -0.74
U2AF1-212ENST00000496462 ABCC12Q96J65 1359 aa10.42□□□□□ -0.74
U2AF1-212ENST00000496462 IDH1O75874 414 aaKnown RBP10.42□□□□□ -0.74
U2AF1-212ENST00000496462 TNNI3KQ59H18 835 aa10.42□□□□□ -0.74
U2AF1-212ENST00000496462 NOP58Q9Y2X3 529 aaKnown RBP10.42□□□□□ -0.74
U2AF1-212ENST00000496462 FPGT-TNNI3KV9GXZ4 949 aa10.42□□□□□ -0.74
U2AF1-212ENST00000496462 C10orf71Q711Q0 1435 aa10.42□□□□□ -0.74
U2AF1-212ENST00000496462 TTC41PQ6P2S7 1318 aa10.42□□□□□ -0.74
U2AF1-212ENST00000496462 USP17L3A6NCW0 530 aa10.42□□□□□ -0.74
U2AF1-212ENST00000496462 USP17L4A6NCW7 530 aa10.42□□□□□ -0.74
U2AF1-212ENST00000496462 ZFYP08048 801 aaPredicted RBP10.42□□□□□ -0.74
U2AF1-212ENST00000496462 MX1P20591 662 aa10.42□□□□□ -0.74
U2AF1-212ENST00000496462 USP17L1Q7RTZ2 530 aa10.42□□□□□ -0.74
U2AF1-212ENST00000496462 LAMB4A4D0S4 1761 aa10.42□□□□□ -0.74
U2AF1-212ENST00000496462 RASSF7Q02833 373 aa10.42□□□□□ -0.74
U2AF1-212ENST00000496462 PTPN12Q05209 780 aaKnown RBP10.42□□□□□ -0.74
U2AF1-212ENST00000496462 TTLL5Q6EMB2 1281 aa10.42□□□□□ -0.74
U2AF1-212ENST00000496462 TJP1Q07157 1748 aa10.41□□□□□ -0.74
U2AF1-212ENST00000496462 XAGE2Q96GT9 111 aa10.41□□□□□ -0.74
U2AF1-212ENST00000496462 APPP05067 770 aa10.41□□□□□ -0.74
U2AF1-212ENST00000496462 GPSM2P81274 684 aa10.41□□□□□ -0.74
U2AF1-212ENST00000496462 TNFAIP1Q13829 316 aa10.41□□□□□ -0.74
U2AF1-212ENST00000496462 TBC1D16Q8TBP0 767 aa10.41□□□□□ -0.74
U2AF1-212ENST00000496462 KCNA3P22001 575 aa10.41□□□□□ -0.74
U2AF1-212ENST00000496462 RPS12P25398 132 aaKnown RBP10.41□□□□□ -0.74
U2AF1-212ENST00000496462 ZNF277Q9NRM2 450 aaPredicted RBP10.41□□□□□ -0.74
U2AF1-212ENST00000496462 PNMA6EA0A0J9YXQ4 647 aa10.41□□□□□ -0.74
U2AF1-212ENST00000496462 KLRG2A4D1S0 409 aaPredicted RBP10.41□□□□□ -0.74
U2AF1-212ENST00000496462 WDHD1O75717 1129 aaPredicted RBP10.41□□□□□ -0.74
U2AF1-212ENST00000496462 GTF2IP78347 998 aa10.41□□□□□ -0.74
U2AF1-212ENST00000496462 POLA2Q14181 598 aa10.41□□□□□ -0.74
U2AF1-212ENST00000496462 DLGAP5Q15398 846 aa10.41□□□□□ -0.74
U2AF1-212ENST00000496462 ZNF287Q9HBT7 754 aa10.41□□□□□ -0.74
U2AF1-212ENST00000496462 ZNF831Q5JPB2 1677 aa10.4□□□□□ -0.74
U2AF1-212ENST00000496462 DOK7Q18PE1 504 aa10.4□□□□□ -0.74
U2AF1-212ENST00000496462 LRRC24Q50LG9 513 aa10.4□□□□□ -0.74
U2AF1-212ENST00000496462 EPHA10Q5JZY3 1008 aa10.4□□□□□ -0.74
U2AF1-212ENST00000496462 PODXL2Q9NZ53 605 aa10.4□□□□□ -0.74
U2AF1-212ENST00000496462 KIAA2012Q0VF49 1180 aa10.4□□□□□ -0.74
U2AF1-212ENST00000496462 ZSCAN29Q8IWY8 852 aaPredicted RBP10.4□□□□□ -0.74
U2AF1-212ENST00000496462 KLHDC4Q8TBB5 520 aa10.4□□□□□ -0.74
U2AF1-212ENST00000496462 QSER1Q2KHR3 1735 aa10.4□□□□□ -0.74
U2AF1-212ENST00000496462 CACNA1FO60840 1977 aa10.4□□□□□ -0.75
U2AF1-212ENST00000496462 NAA16Q6N069 864 aaPredicted RBP10.4□□□□□ -0.75
U2AF1-212ENST00000496462 ZC3H4Q9UPT8 1303 aaKnown RBP10.4□□□□□ -0.75
U2AF1-212ENST00000496462 ECE2O60344 883 aa10.39□□□□□ -0.75
U2AF1-212ENST00000496462 SUGT1Q9Y2Z0 365 aa10.39□□□□□ -0.75
U2AF1-212ENST00000496462 COL5A3P25940 1745 aaPredicted RBP10.39□□□□□ -0.75
U2AF1-212ENST00000496462 CASP7P55210 303 aa10.39□□□□□ -0.75
U2AF1-212ENST00000496462 AOC3Q16853 763 aa10.39□□□□□ -0.75
U2AF1-212ENST00000496462 MFSD14BQ5SR56 506 aa10.39□□□□□ -0.75
U2AF1-212ENST00000496462 TEKT1Q969V4 418 aa10.39□□□□□ -0.75
U2AF1-212ENST00000496462 AIDAQ96BJ3 306 aa10.39□□□□□ -0.75
U2AF1-212ENST00000496462 TIMM10P62072 90 aa10.39□□□□□ -0.75
U2AF1-212ENST00000496462 EVI5LQ96CN4 794 aa10.39□□□□□ -0.75
U2AF1-212ENST00000496462 PUS3Q9BZE2 481 aaKnown RBP10.39□□□□□ -0.75
U2AF1-212ENST00000496462 BOLA2Q9H3K6 86 aa10.39□□□□□ -0.75
U2AF1-212ENST00000496462 DBNDD1Q9H9R9 158 aa10.39□□□□□ -0.75
U2AF1-212ENST00000496462 C4AP0C0L4 1744 aa10.38□□□□□ -0.75
U2AF1-212ENST00000496462 HLA-DOAP06340 250 aa10.38□□□□□ -0.75
U2AF1-212ENST00000496462 USP5P45974 858 aa10.38□□□□□ -0.75
U2AF1-212ENST00000496462 DCPSQ96C86 337 aaKnown RBP10.38□□□□□ -0.75
U2AF1-212ENST00000496462 RIPOR2Q9Y4F9 1068 aa10.38□□□□□ -0.75
U2AF1-212ENST00000496462 MED23Q9ULK4 1368 aa10.38□□□□□ -0.75
U2AF1-212ENST00000496462 FGD1P98174 961 aa10.38□□□□□ -0.75
U2AF1-212ENST00000496462 CRNKL1Q9BZJ0 848 aaKnown RBP10.38□□□□□ -0.75
U2AF1-212ENST00000496462 CD209Q9NNX6 404 aa10.38□□□□□ -0.75
U2AF1-212ENST00000496462 IQSEC3Q9UPP2 1182 aaPredicted RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms