RNA–Protein interactions for RNA: ENST00000496262.1

RNF220-217, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 840 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-217ENST00000496262 IGHMBP2P38935 993 aaKnown RBP13.9□□□□□ -0.18
RNF220-217ENST00000496262 CCT4P50991 539 aaKnown RBP13.9□□□□□ -0.18
RNF220-217ENST00000496262 BRPF1P55201 1214 aaPredicted RBP13.9□□□□□ -0.18
RNF220-217ENST00000496262 EXOSC9Q06265 439 aaKnown RBP13.9□□□□□ -0.18
RNF220-217ENST00000496262 USP17L1Q7RTZ2 530 aa13.9□□□□□ -0.18
RNF220-217ENST00000496262 AGBL3Q8NEM8 1001 aa13.9□□□□□ -0.18
RNF220-217ENST00000496262 DNAAF4Q8WXU2 420 aa13.9□□□□□ -0.18
RNF220-217ENST00000496262 CDCA5Q96FF9 252 aa13.9□□□□□ -0.18
RNF220-217ENST00000496262 MYH16Q9H6N6 1097 aa13.9□□□□□ -0.18
RNF220-217ENST00000496262 MYOZ2Q9NPC6 264 aa13.9□□□□□ -0.18
RNF220-217ENST00000496262 MED23Q9ULK4 1368 aa13.9□□□□□ -0.18
RNF220-217ENST00000496262 H7C1W4 665 aa13.89□□□□□ -0.19
RNF220-217ENST00000496262 ITGA6P23229 1130 aa13.89□□□□□ -0.19
RNF220-217ENST00000496262 ZNF157P51786 506 aaPredicted RBP13.89□□□□□ -0.19
RNF220-217ENST00000496262 ZNF280AP59817 542 aaPredicted RBP13.89□□□□□ -0.19
RNF220-217ENST00000496262 NOGQ13253 232 aa13.89□□□□□ -0.19
RNF220-217ENST00000496262 RGMBQ6NW40 437 aa13.89□□□□□ -0.19
RNF220-217ENST00000496262 PODNQ7Z5L7 613 aa13.89□□□□□ -0.19
RNF220-217ENST00000496262 ANP32EQ9BTT0 268 aa13.89□□□□□ -0.19
RNF220-217ENST00000496262 F6X3S4 739 aa13.88□□□□□ -0.19
RNF220-217ENST00000496262 KLRK1P26718 216 aa13.88□□□□□ -0.19
RNF220-217ENST00000496262 KCNJ4P48050 445 aa13.88□□□□□ -0.19
RNF220-217ENST00000496262 MPHOSPH8Q99549 860 aa13.88□□□□□ -0.19
RNF220-217ENST00000496262 CHMP3Q9Y3E7 222 aa13.88□□□□□ -0.19
RNF220-217ENST00000496262 FAM155AB1AL88 458 aaPredicted RBP13.87□□□□□ -0.19
RNF220-217ENST00000496262 CA12O43570 354 aa13.87□□□□□ -0.19
RNF220-217ENST00000496262 VAMP4O75379 141 aa13.87□□□□□ -0.19
RNF220-217ENST00000496262 TXNRD3Q86VQ6 643 aa13.87□□□□□ -0.19
RNF220-217ENST00000496262 FAM9BQ8IZU0 186 aa13.87□□□□□ -0.19
RNF220-217ENST00000496262 LINS1Q8NG48 757 aa13.87□□□□□ -0.19
RNF220-217ENST00000496262 GMLQ99445 158 aa13.87□□□□□ -0.19
RNF220-217ENST00000496262 MYH3P11055 1940 aa13.87□□□□□ -0.19
RNF220-217ENST00000496262 ZNF804BA4D1E1 1349 aa13.87□□□□□ -0.19
RNF220-217ENST00000496262 CCDC85CA6NKD9 419 aa13.86□□□□□ -0.19
RNF220-217ENST00000496262 CASP7P55210 303 aa13.86□□□□□ -0.19
RNF220-217ENST00000496262 KIF23Q02241 960 aaPredicted RBP13.86□□□□□ -0.19
RNF220-217ENST00000496262 NBPF9Q3BBW0 867 aa13.86□□□□□ -0.19
RNF220-217ENST00000496262 DACT2Q5SW24 774 aa13.86□□□□□ -0.19
RNF220-217ENST00000496262 PRAMEF18Q5VWM3 479 aa13.86□□□□□ -0.19
RNF220-217ENST00000496262 WDR63Q8IWG1 891 aa13.86□□□□□ -0.19
RNF220-217ENST00000496262 PLA2G12BQ9BX93 195 aa13.86□□□□□ -0.19
RNF220-217ENST00000496262 SPINK5Q9NQ38 1064 aaPredicted RBP13.86□□□□□ -0.19
RNF220-217ENST00000496262 ZNF609O15014 1411 aa13.86□□□□□ -0.19
RNF220-217ENST00000496262 SASH1O94885 1247 aa13.85□□□□□ -0.19
RNF220-217ENST00000496262 CHRNDQ07001 517 aa13.85□□□□□ -0.19
RNF220-217ENST00000496262 OGFOD1Q8N543 542 aa13.85□□□□□ -0.19
RNF220-217ENST00000496262 CCDC102AQ96A19 550 aa13.85□□□□□ -0.19
RNF220-217ENST00000496262 ANKRD2Q9GZV1 360 aa13.85□□□□□ -0.19
RNF220-217ENST00000496262 COA1Q9GZY4 146 aa13.85□□□□□ -0.19
RNF220-217ENST00000496262 LEMD3Q9Y2U8 911 aa13.85□□□□□ -0.19
RNF220-217ENST00000496262 ANKRD18BA2A2Z9 1011 aa13.84□□□□□ -0.19
RNF220-217ENST00000496262 SNAP23O00161 211 aa13.84□□□□□ -0.19
RNF220-217ENST00000496262 TAF5LO75529 589 aa13.84□□□□□ -0.19
RNF220-217ENST00000496262 TTLL12Q14166 644 aaPredicted RBP13.84□□□□□ -0.19
RNF220-217ENST00000496262 NCBP3Q53F19 620 aaKnown RBP13.84□□□□□ -0.19
RNF220-217ENST00000496262 MOB2Q70IA6 237 aa13.84□□□□□ -0.19
RNF220-217ENST00000496262 KIAA0825Q8IV33 1275 aa13.84□□□□□ -0.19
RNF220-217ENST00000496262 HELBQ8NG08 1087 aaPredicted RBP13.84□□□□□ -0.19
RNF220-217ENST00000496262 PSME4Q14997 1843 aa13.84□□□□□ -0.19
RNF220-217ENST00000496262 POLR2AP24928 1970 aaKnown RBP13.83□□□□□ -0.19
RNF220-217ENST00000496262 TRPA1O75762 1119 aa13.83□□□□□ -0.2
RNF220-217ENST00000496262 CSF1RP07333 972 aa13.83□□□□□ -0.2
RNF220-217ENST00000496262 SLC10A3P09131 477 aa13.83□□□□□ -0.2
RNF220-217ENST00000496262 GTF2IP78347 998 aa13.83□□□□□ -0.2
RNF220-217ENST00000496262 IFIT5Q13325 482 aaKnown RBP13.83□□□□□ -0.2
RNF220-217ENST00000496262 DGKZQ13574 1117 aa13.83□□□□□ -0.2
RNF220-217ENST00000496262 BEND3Q5T5X7 828 aa13.83□□□□□ -0.2
RNF220-217ENST00000496262 STRIP1Q5VSL9 837 aa13.83□□□□□ -0.2
RNF220-217ENST00000496262 TTLL5Q6EMB2 1281 aa13.83□□□□□ -0.2
RNF220-217ENST00000496262 SLC4A10Q6U841 1118 aa13.83□□□□□ -0.2
RNF220-217ENST00000496262 MCOLN1Q9GZU1 580 aa13.83□□□□□ -0.2
RNF220-217ENST00000496262 MYO3BQ8WXR4 1341 aa13.83□□□□□ -0.2
RNF220-217ENST00000496262 PITPNM2Q9BZ72 1349 aa13.83□□□□□ -0.2
RNF220-217ENST00000496262 WNT10BO00744 389 aa13.82□□□□□ -0.2
RNF220-217ENST00000496262 FOXO4P98177 505 aa13.82□□□□□ -0.2
RNF220-217ENST00000496262 RASAL3Q86YV0 1011 aa13.82□□□□□ -0.2
RNF220-217ENST00000496262 ZNF594Q96JF6 807 aaPredicted RBP13.82□□□□□ -0.2
RNF220-217ENST00000496262 RNF186Q9NXI6 227 aa13.82□□□□□ -0.2
RNF220-217ENST00000496262 F8W031 263 aaPredicted RBP13.81□□□□□ -0.2
RNF220-217ENST00000496262 UBE2Q2LH0YL09 131 aa13.81□□□□□ -0.2
RNF220-217ENST00000496262 PLIN1O60240 522 aa13.81□□□□□ -0.2
RNF220-217ENST00000496262 PRKG1Q13976 671 aa13.81□□□□□ -0.2
RNF220-217ENST00000496262 TAF7LQ5H9L4 462 aa13.81□□□□□ -0.2
RNF220-217ENST00000496262 EPHA10Q5JZY3 1008 aa13.81□□□□□ -0.2
RNF220-217ENST00000496262 LMBR1LQ6UX01 489 aa13.81□□□□□ -0.2
RNF220-217ENST00000496262 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.81□□□□□ -0.2
RNF220-217ENST00000496262 HDAC9Q9UKV0 1011 aa13.81□□□□□ -0.2
RNF220-217ENST00000496262 JAG2Q9Y219 1238 aa13.81□□□□□ -0.2
RNF220-217ENST00000496262 PAPPA2Q9BXP8 1791 aa13.81□□□□□ -0.2
RNF220-217ENST00000496262 GRM8O00222 908 aa13.8□□□□□ -0.2
RNF220-217ENST00000496262 MKRN3Q13064 507 aaKnown RBP13.8□□□□□ -0.2
RNF220-217ENST00000496262 CSRNP1Q96S65 589 aa13.8□□□□□ -0.2
RNF220-217ENST00000496262 CD209Q9NNX6 404 aa13.8□□□□□ -0.2
RNF220-217ENST00000496262 C9orf78Q9NZ63 289 aaPredicted RBP13.8□□□□□ -0.2
RNF220-217ENST00000496262 ZNF646O15015 1829 aaPredicted RBP13.8□□□□□ -0.2
RNF220-217ENST00000496262 NF2P35240 595 aa13.79□□□□□ -0.2
RNF220-217ENST00000496262 FKBP1BP68106 108 aa13.79□□□□□ -0.2
RNF220-217ENST00000496262 CCDC57Q2TAC2 916 aa13.79□□□□□ -0.2
RNF220-217ENST00000496262 ZNF804AQ7Z570 1209 aa13.79□□□□□ -0.2
RNF220-217ENST00000496262 CNNM1Q9NRU3 951 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms