RNA–Protein interactions for RNA: ENST00000496172.5

ERGIC3-219, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 781 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-219ENST00000496172 MKI67P46013 3256 aaKnown RBP13.27□□□□□ -0.28
ERGIC3-219ENST00000496172 H7C1D1 291 aa13.27□□□□□ -0.29
ERGIC3-219ENST00000496172 ATP2B4P23634 1241 aa13.27□□□□□ -0.29
ERGIC3-219ENST00000496172 ZNF157P51786 506 aaPredicted RBP13.27□□□□□ -0.29
ERGIC3-219ENST00000496172 NOM1Q5C9Z4 860 aaKnown RBP13.27□□□□□ -0.29
ERGIC3-219ENST00000496172 DIEXFQ68CQ4 756 aaKnown RBP13.27□□□□□ -0.29
ERGIC3-219ENST00000496172 CSRNP1Q96S65 589 aa13.27□□□□□ -0.29
ERGIC3-219ENST00000496172 MPHOSPH8Q99549 860 aa13.27□□□□□ -0.29
ERGIC3-219ENST00000496172 DBNDD1Q9H9R9 158 aa13.27□□□□□ -0.29
ERGIC3-219ENST00000496172 C9orf78Q9NZ63 289 aaPredicted RBP13.27□□□□□ -0.29
ERGIC3-219ENST00000496172 XDHP47989 1333 aa13.27□□□□□ -0.29
ERGIC3-219ENST00000496172 PAPPA2Q9BXP8 1791 aa13.27□□□□□ -0.29
ERGIC3-219ENST00000496172 ECE2O60344 883 aa13.26□□□□□ -0.29
ERGIC3-219ENST00000496172 ALDH1L1O75891 902 aa13.26□□□□□ -0.29
ERGIC3-219ENST00000496172 ITGA6P23229 1130 aa13.26□□□□□ -0.29
ERGIC3-219ENST00000496172 CASP7P55210 303 aa13.26□□□□□ -0.29
ERGIC3-219ENST00000496172 DOK7Q18PE1 504 aa13.26□□□□□ -0.29
ERGIC3-219ENST00000496172 HABP4Q5JVS0 413 aaKnown RBP13.26□□□□□ -0.29
ERGIC3-219ENST00000496172 KRT26Q7Z3Y9 468 aa13.26□□□□□ -0.29
ERGIC3-219ENST00000496172 MICALL2Q8IY33 904 aa13.26□□□□□ -0.29
ERGIC3-219ENST00000496172 SRCIN1Q9C0H9 1055 aa13.26□□□□□ -0.29
ERGIC3-219ENST00000496172 HTTP42858 3142 aa13.26□□□□□ -0.29
ERGIC3-219ENST00000496172 PTPRCP08575 1304 aa13.25□□□□□ -0.29
ERGIC3-219ENST00000496172 ANKRD18BA2A2Z9 1011 aa13.25□□□□□ -0.29
ERGIC3-219ENST00000496172 YDJCA8MPS7 323 aa13.25□□□□□ -0.29
ERGIC3-219ENST00000496172 GRM8O00222 908 aa13.25□□□□□ -0.29
ERGIC3-219ENST00000496172 CSF1RP07333 972 aa13.25□□□□□ -0.29
ERGIC3-219ENST00000496172 MRPL50Q8N5N7 158 aaKnown RBP13.25□□□□□ -0.29
ERGIC3-219ENST00000496172 CDCA7LQ96GN5 454 aa13.25□□□□□ -0.29
ERGIC3-219ENST00000496172 MINPP1Q9UNW1 487 aa13.25□□□□□ -0.29
ERGIC3-219ENST00000496172 CHMP3Q9Y3E7 222 aa13.25□□□□□ -0.29
ERGIC3-219ENST00000496172 COL4A1P02462 1669 aa13.24□□□□□ -0.29
ERGIC3-219ENST00000496172 ZNF609O15014 1411 aa13.24□□□□□ -0.29
ERGIC3-219ENST00000496172 MYH3P11055 1940 aa13.24□□□□□ -0.29
ERGIC3-219ENST00000496172 SHTN1A0MZ66 631 aa13.24□□□□□ -0.29
ERGIC3-219ENST00000496172 RPS12P25398 132 aaKnown RBP13.24□□□□□ -0.29
ERGIC3-219ENST00000496172 IFIT5Q13325 482 aaKnown RBP13.24□□□□□ -0.29
ERGIC3-219ENST00000496172 ALDH1L2Q3SY69 923 aa13.24□□□□□ -0.29
ERGIC3-219ENST00000496172 SSH1Q8WYL5 1049 aa13.24□□□□□ -0.29
ERGIC3-219ENST00000496172 ANKRD2Q9GZV1 360 aa13.24□□□□□ -0.29
ERGIC3-219ENST00000496172 PSMD14O00487 310 aa13.23□□□□□ -0.29
ERGIC3-219ENST00000496172 CT47B1P0C2W7 299 aaPredicted RBP13.23□□□□□ -0.29
ERGIC3-219ENST00000496172 TAF7LQ5H9L4 462 aa13.23□□□□□ -0.29
ERGIC3-219ENST00000496172 FBXO46Q6PJ61 603 aaPredicted RBP13.23□□□□□ -0.29
ERGIC3-219ENST00000496172 DLK2Q6UY11 383 aa13.23□□□□□ -0.29
ERGIC3-219ENST00000496172 RASAL3Q86YV0 1011 aa13.23□□□□□ -0.29
ERGIC3-219ENST00000496172 LEMD3Q9Y2U8 911 aa13.23□□□□□ -0.29
ERGIC3-219ENST00000496172 ADM5C9JUS6 153 aa13.22□□□□□ -0.29
ERGIC3-219ENST00000496172 EGFRP00533 1210 aa13.22□□□□□ -0.29
ERGIC3-219ENST00000496172 KCNJ4P48050 445 aa13.22□□□□□ -0.29
ERGIC3-219ENST00000496172 CCT4P50991 539 aaKnown RBP13.22□□□□□ -0.29
ERGIC3-219ENST00000496172 FKBP1BP68106 108 aa13.22□□□□□ -0.29
ERGIC3-219ENST00000496172 FOXO4P98177 505 aa13.22□□□□□ -0.29
ERGIC3-219ENST00000496172 CCDC57Q2TAC2 916 aa13.22□□□□□ -0.29
ERGIC3-219ENST00000496172 SAMD7Q7Z3H4 446 aa13.22□□□□□ -0.29
ERGIC3-219ENST00000496172 TRMT2AQ8IZ69 625 aaKnown RBP13.22□□□□□ -0.29
ERGIC3-219ENST00000496172 MIER1Q8N108 512 aa13.22□□□□□ -0.29
ERGIC3-219ENST00000496172 DCPSQ96C86 337 aaKnown RBP13.22□□□□□ -0.29
ERGIC3-219ENST00000496172 SMC4Q9NTJ3 1288 aa13.22□□□□□ -0.29
ERGIC3-219ENST00000496172 ZBTB12Q9Y330 459 aaPredicted RBP13.22□□□□□ -0.29
ERGIC3-219ENST00000496172 PSME4Q14997 1843 aa13.22□□□□□ -0.29
ERGIC3-219ENST00000496172 LMBR1LQ6UX01 489 aa13.21□□□□□ -0.29
ERGIC3-219ENST00000496172 PODNQ7Z5L7 613 aa13.21□□□□□ -0.29
ERGIC3-219ENST00000496172 ZNF296Q8WUU4 475 aaPredicted RBP13.21□□□□□ -0.29
ERGIC3-219ENST00000496172 CFHR5Q9BXR6 569 aa13.21□□□□□ -0.29
ERGIC3-219ENST00000496172 MED23Q9ULK4 1368 aa13.2□□□□□ -0.3
ERGIC3-219ENST00000496172 ZNF804BA4D1E1 1349 aa13.2□□□□□ -0.3
ERGIC3-219ENST00000496172 VIL1P09327 827 aaKnown RBP13.2□□□□□ -0.3
ERGIC3-219ENST00000496172 TBC1D10BQ4KMP7 808 aaPredicted RBP13.2□□□□□ -0.3
ERGIC3-219ENST00000496172 KCNQ5Q9NR82 932 aa13.2□□□□□ -0.3
ERGIC3-219ENST00000496172 HDAC9Q9UKV0 1011 aa13.2□□□□□ -0.3
ERGIC3-219ENST00000496172 SCN9AQ15858 1988 aa13.2□□□□□ -0.3
ERGIC3-219ENST00000496172 LAMB1P07942 1786 aa13.2□□□□□ -0.3
ERGIC3-219ENST00000496172 USP17L3A6NCW0 530 aa13.19□□□□□ -0.3
ERGIC3-219ENST00000496172 USP17L4A6NCW7 530 aa13.19□□□□□ -0.3
ERGIC3-219ENST00000496172 FXR1P51114 621 aaKnown RBP eCLIP13.19□□□□□ -0.3
ERGIC3-219ENST00000496172 CHRNDQ07001 517 aa13.19□□□□□ -0.3
ERGIC3-219ENST00000496172 USP17L1Q7RTZ2 530 aa13.19□□□□□ -0.3
ERGIC3-219ENST00000496172 SULF1Q8IWU6 871 aa13.19□□□□□ -0.3
ERGIC3-219ENST00000496172 CDCA5Q96FF9 252 aa13.19□□□□□ -0.3
ERGIC3-219ENST00000496172 COA1Q9GZY4 146 aa13.19□□□□□ -0.3
ERGIC3-219ENST00000496172 CNNM1Q9NRU3 951 aa13.19□□□□□ -0.3
ERGIC3-219ENST00000496172 SPEF2Q9C093 1822 aa13.18□□□□□ -0.3
ERGIC3-219ENST00000496172 NBPF7P0C2Y1 421 aaPredicted RBP13.18□□□□□ -0.3
ERGIC3-219ENST00000496172 KIF4BQ2VIQ3 1234 aa13.18□□□□□ -0.3
ERGIC3-219ENST00000496172 EPHA10Q5JZY3 1008 aa13.18□□□□□ -0.3
ERGIC3-219ENST00000496172 RSBN1LQ6PCB5 846 aaPredicted RBP13.18□□□□□ -0.3
ERGIC3-219ENST00000496172 LDHAL6AQ6ZMR3 332 aa13.18□□□□□ -0.3
ERGIC3-219ENST00000496172 AGBL3Q8NEM8 1001 aa13.18□□□□□ -0.3
ERGIC3-219ENST00000496172 SUCLG2Q96I99 432 aa13.18□□□□□ -0.3
ERGIC3-219ENST00000496172 GGA3Q9NZ52 723 aa13.18□□□□□ -0.3
ERGIC3-219ENST00000496172 KIAA0100Q14667 2235 aaKnown RBP13.17□□□□□ -0.3
ERGIC3-219ENST00000496172 UTYO14607 1347 aa13.17□□□□□ -0.3
ERGIC3-219ENST00000496172 BRCA2P51587 3418 aa13.17□□□□□ -0.3
ERGIC3-219ENST00000496172 GPR25O00155 361 aa13.17□□□□□ -0.3
ERGIC3-219ENST00000496172 TM4SF4P48230 202 aa13.17□□□□□ -0.3
ERGIC3-219ENST00000496172 RBM26Q5T8P6 1007 aaKnown RBP13.17□□□□□ -0.3
ERGIC3-219ENST00000496172 FBXW7Q969H0 707 aa13.17□□□□□ -0.3
ERGIC3-219ENST00000496172 API5Q9BZZ5 524 aaKnown RBP13.17□□□□□ -0.3
ERGIC3-219ENST00000496172 NOB1Q9ULX3 412 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms