RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 MAP4K1Q92918 833 aa19.73■□□□□ 0.75
HLA-A-208ENST00000496081 RGPD3A6NKT7 1758 aaPredicted RBP19.73■□□□□ 0.75
HLA-A-208ENST00000496081 RGPD4Q7Z3J3 1758 aa19.73■□□□□ 0.75
HLA-A-208ENST00000496081 SERPINB2P05120 415 aa19.72■□□□□ 0.75
HLA-A-208ENST00000496081 MCMDC2Q4G0Z9 681 aa19.72■□□□□ 0.75
HLA-A-208ENST00000496081 SPRYD3Q8NCJ5 442 aa19.72■□□□□ 0.75
HLA-A-208ENST00000496081 SEC62Q99442 399 aaKnown RBP19.72■□□□□ 0.75
HLA-A-208ENST00000496081 MINPP1Q9UNW1 487 aa19.72■□□□□ 0.75
HLA-A-208ENST00000496081 SNX14Q9Y5W7 946 aa19.72■□□□□ 0.75
HLA-A-208ENST00000496081 ST18O60284 1047 aa19.72■□□□□ 0.75
HLA-A-208ENST00000496081 UQCRFS1P1P0C7P4 283 aa19.72■□□□□ 0.75
HLA-A-208ENST00000496081 SLKQ9H2G2 1235 aaPredicted RBP19.72■□□□□ 0.75
HLA-A-208ENST00000496081 RNF113AO15541 343 aaKnown RBP19.71■□□□□ 0.75
HLA-A-208ENST00000496081 NECTIN1Q15223 517 aa19.71■□□□□ 0.75
HLA-A-208ENST00000496081 SLFNL1Q499Z3 407 aa19.71■□□□□ 0.75
HLA-A-208ENST00000496081 ZMYM1Q5SVZ6 1142 aa19.71■□□□□ 0.75
HLA-A-208ENST00000496081 COL23A1Q86Y22 540 aaPredicted RBP19.71■□□□□ 0.75
HLA-A-208ENST00000496081 RASEFQ8IZ41 740 aa19.71■□□□□ 0.75
HLA-A-208ENST00000496081 HELLSQ9NRZ9 838 aa19.71■□□□□ 0.75
HLA-A-208ENST00000496081 NEK4P51957 841 aa19.7■□□□□ 0.74
HLA-A-208ENST00000496081 DDR1Q08345 913 aa19.7■□□□□ 0.74
HLA-A-208ENST00000496081 KCNB2Q92953 911 aa19.7■□□□□ 0.74
HLA-A-208ENST00000496081 RBM8AQ9Y5S9 174 aaKnown RBP19.7■□□□□ 0.74
HLA-A-208ENST00000496081 POLRMTO00411 1230 aaKnown RBP19.7■□□□□ 0.74
HLA-A-208ENST00000496081 CYP2E1P05181 493 aaPredicted RBP19.7■□□□□ 0.74
HLA-A-208ENST00000496081 PRPF40BQ6NWY9 871 aaKnown RBP19.7■□□□□ 0.74
HLA-A-208ENST00000496081 CCDC129Q6ZRS4 1044 aa19.7■□□□□ 0.74
HLA-A-208ENST00000496081 BCAMP50895 628 aa19.69■□□□□ 0.74
HLA-A-208ENST00000496081 UBE4AQ14139 1066 aa19.69■□□□□ 0.74
HLA-A-208ENST00000496081 LRRFIP1Q32MZ4 808 aaKnown RBP19.69■□□□□ 0.74
HLA-A-208ENST00000496081 HMG20BQ9P0W2 317 aa19.69■□□□□ 0.74
HLA-A-208ENST00000496081 WTIPA6NIX2 430 aaPredicted RBP19.68■□□□□ 0.74
HLA-A-208ENST00000496081 KCNJ4P48050 445 aa19.68■□□□□ 0.74
HLA-A-208ENST00000496081 ST5P78524 1137 aa19.68■□□□□ 0.74
HLA-A-208ENST00000496081 FLAD1Q8NFF5 587 aa19.68■□□□□ 0.74
HLA-A-208ENST00000496081 ZFYP08048 801 aaPredicted RBP19.67■□□□□ 0.74
HLA-A-208ENST00000496081 RASGRF1Q13972 1273 aa19.67■□□□□ 0.74
HLA-A-208ENST00000496081 TTF1Q15361 905 aaPredicted RBP19.67■□□□□ 0.74
HLA-A-208ENST00000496081 SPATA5Q8NB90 893 aa19.67■□□□□ 0.74
HLA-A-208ENST00000496081 MYH7P12883 1935 aa19.67■□□□□ 0.74
HLA-A-208ENST00000496081 CRY2Q49AN0 593 aa19.67■□□□□ 0.74
HLA-A-208ENST00000496081 CREB3L3Q68CJ9 461 aa19.67■□□□□ 0.74
HLA-A-208ENST00000496081 NLGN1Q8N2Q7 840 aa19.67■□□□□ 0.74
HLA-A-208ENST00000496081 UPF3BQ9BZI7 483 aaKnown RBP19.67■□□□□ 0.74
HLA-A-208ENST00000496081 PIH1D3Q9NQM4 214 aaKnown RBP19.67■□□□□ 0.74
HLA-A-208ENST00000496081 MAST3O60307 1309 aa19.66■□□□□ 0.74
HLA-A-208ENST00000496081 GRAPQ13588 217 aa19.66■□□□□ 0.74
HLA-A-208ENST00000496081 GRAPLQ8TC17 118 aaPredicted RBP19.66■□□□□ 0.74
HLA-A-208ENST00000496081 OSBP2Q969R2 916 aa19.66■□□□□ 0.74
HLA-A-208ENST00000496081 MYO5AQ9Y4I1 1855 aaKnown RBP19.66■□□□□ 0.74
HLA-A-208ENST00000496081 PNPLA7Q6ZV29 1317 aa19.66■□□□□ 0.74
HLA-A-208ENST00000496081 SLC27A2O14975 620 aa19.65■□□□□ 0.74
HLA-A-208ENST00000496081 ANKRD2Q9GZV1 360 aa19.65■□□□□ 0.74
HLA-A-208ENST00000496081 M0R2C6 588 aa19.65■□□□□ 0.74
HLA-A-208ENST00000496081 ZKSCAN1P17029 563 aaPredicted RBP19.65■□□□□ 0.74
HLA-A-208ENST00000496081 ADCK5Q3MIX3 580 aa19.65■□□□□ 0.74
HLA-A-208ENST00000496081 IL27Q8NEV9 243 aa19.65■□□□□ 0.74
HLA-A-208ENST00000496081 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.65■□□□□ 0.74
HLA-A-208ENST00000496081 ZNF804BA4D1E1 1349 aa19.64■□□□□ 0.74
HLA-A-208ENST00000496081 GYG1P46976 350 aa19.64■□□□□ 0.73
HLA-A-208ENST00000496081 APPBP2Q92624 585 aa19.64■□□□□ 0.73
HLA-A-208ENST00000496081 ANP32EQ9BTT0 268 aa19.64■□□□□ 0.73
HLA-A-208ENST00000496081 ADD2P35612 726 aa19.63■□□□□ 0.73
HLA-A-208ENST00000496081 MCM2P49736 904 aa19.63■□□□□ 0.73
HLA-A-208ENST00000496081 WASHC4Q2M389 1173 aa19.63■□□□□ 0.73
HLA-A-208ENST00000496081 VPS53Q5VIR6 699 aa19.63■□□□□ 0.73
HLA-A-208ENST00000496081 RNF20Q5VTR2 975 aa19.63■□□□□ 0.73
HLA-A-208ENST00000496081 ZSCAN25Q6NSZ9 544 aa19.63■□□□□ 0.73
HLA-A-208ENST00000496081 RPGRQ92834 1020 aaKnown RBP19.63■□□□□ 0.73
HLA-A-208ENST00000496081 U3KPZ7 1027 aaPredicted RBP19.63■□□□□ 0.73
HLA-A-208ENST00000496081 IDH1O75874 414 aaKnown RBP19.62■□□□□ 0.73
HLA-A-208ENST00000496081 HSP90AA1P07900 732 aaKnown RBP19.62■□□□□ 0.73
HLA-A-208ENST00000496081 DDIT3P35638 169 aa19.62■□□□□ 0.73
HLA-A-208ENST00000496081 SLC9C2Q5TAH2 1124 aa19.62■□□□□ 0.73
HLA-A-208ENST00000496081 DSCC1Q9BVC3 393 aa19.62■□□□□ 0.73
HLA-A-208ENST00000496081 TM6SF1Q9BZW5 370 aa19.62■□□□□ 0.73
HLA-A-208ENST00000496081 DOCK2Q92608 1830 aa19.62■□□□□ 0.73
HLA-A-208ENST00000496081 NRXN2Q9P2S2 1712 aa19.62■□□□□ 0.73
HLA-A-208ENST00000496081 KLRG2A4D1S0 409 aaPredicted RBP19.62■□□□□ 0.73
HLA-A-208ENST00000496081 CASTP20810 708 aaKnown RBP19.62■□□□□ 0.73
HLA-A-208ENST00000496081 CAVIN4Q5BKX8 364 aa19.62■□□□□ 0.73
HLA-A-208ENST00000496081 FAM84BQ96KN1 310 aaPredicted RBP19.62■□□□□ 0.73
HLA-A-208ENST00000496081 JAKMIP1Q96N16 626 aaKnown RBP19.62■□□□□ 0.73
HLA-A-208ENST00000496081 TTC14Q96N46 770 aa19.62■□□□□ 0.73
HLA-A-208ENST00000496081 PUS7LQ9H0K6 701 aaKnown RBP19.62■□□□□ 0.73
HLA-A-208ENST00000496081 SOCS7O14512 581 aa19.61■□□□□ 0.73
HLA-A-208ENST00000496081 HSPD1P10809 573 aaKnown RBP19.61■□□□□ 0.73
HLA-A-208ENST00000496081 KLRK1P26718 216 aa19.61■□□□□ 0.73
HLA-A-208ENST00000496081 TSGA10IPQ3SY00 556 aa19.61■□□□□ 0.73
HLA-A-208ENST00000496081 ANO8Q9HCE9 1232 aaPredicted RBP19.61■□□□□ 0.73
HLA-A-208ENST00000496081 ZSWIM6Q9HCJ5 1215 aa19.61■□□□□ 0.73
HLA-A-208ENST00000496081 FOXD4L1Q9NU39 408 aa19.61■□□□□ 0.73
HLA-A-208ENST00000496081 TAF6LQ9Y6J9 622 aa19.61■□□□□ 0.73
HLA-A-208ENST00000496081 UBE3CQ15386 1083 aa19.6■□□□□ 0.73
HLA-A-208ENST00000496081 SLC51AQ86UW1 340 aa19.6■□□□□ 0.73
HLA-A-208ENST00000496081 RBM17Q96I25 401 aaKnown RBP19.6■□□□□ 0.73
HLA-A-208ENST00000496081 GNL3LQ9NVN8 582 aaKnown RBP19.6■□□□□ 0.73
HLA-A-208ENST00000496081 WWC3Q9ULE0 1092 aa19.6■□□□□ 0.73
HLA-A-208ENST00000496081 IQSEC3Q9UPP2 1182 aaPredicted RBP19.6■□□□□ 0.73
HLA-A-208ENST00000496081 ANKRD31Q8N7Z5 1873 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms