RNA–Protein interactions for RNA: ENST00000496071.5

COMMD3-214, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,150 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-214ENST00000496071 C15orf52Q6ZUT6 534 aaKnown RBP21.41■■□□□ 1.02
COMMD3-214ENST00000496071 TXNRD3Q86VQ6 643 aa21.41■■□□□ 1.02
COMMD3-214ENST00000496071 HELBQ8NG08 1087 aaPredicted RBP21.41■■□□□ 1.02
COMMD3-214ENST00000496071 ZBED9Q6R2W3 1325 aa21.4■■□□□ 1.02
COMMD3-214ENST00000496071 TAF5LO75529 589 aa21.4■■□□□ 1.02
COMMD3-214ENST00000496071 HIRAP54198 1017 aaPredicted RBP21.4■■□□□ 1.02
COMMD3-214ENST00000496071 ANKRD44Q8N8A2 993 aa21.4■■□□□ 1.02
COMMD3-214ENST00000496071 TRPM4Q8TD43 1214 aa21.4■■□□□ 1.02
COMMD3-214ENST00000496071 SHTN1A0MZ66 631 aa21.39■■□□□ 1.01
COMMD3-214ENST00000496071 STRIP1Q5VSL9 837 aa21.39■■□□□ 1.01
COMMD3-214ENST00000496071 SAMD7Q7Z3H4 446 aa21.39■■□□□ 1.01
COMMD3-214ENST00000496071 MROH5Q6ZUA9 1318 aa21.38■■□□□ 1.01
COMMD3-214ENST00000496071 MYO3BQ8WXR4 1341 aa21.38■■□□□ 1.01
COMMD3-214ENST00000496071 PLIN1O60240 522 aa21.38■■□□□ 1.01
COMMD3-214ENST00000496071 UBTFL1P0CB47 393 aaPredicted RBP21.38■■□□□ 1.01
COMMD3-214ENST00000496071 JMYQ8N9B5 988 aa21.38■■□□□ 1.01
COMMD3-214ENST00000496071 TRPM7Q96QT4 1865 aa21.37■■□□□ 1.01
COMMD3-214ENST00000496071 MMP14P50281 582 aa21.37■■□□□ 1.01
COMMD3-214ENST00000496071 UBE4AQ14139 1066 aa21.37■■□□□ 1.01
COMMD3-214ENST00000496071 TBC1D10BQ4KMP7 808 aaPredicted RBP21.37■■□□□ 1.01
COMMD3-214ENST00000496071 INTS3Q68E01 1043 aaKnown RBP21.37■■□□□ 1.01
COMMD3-214ENST00000496071 CDC37L1Q7L3B6 337 aa21.37■■□□□ 1.01
COMMD3-214ENST00000496071 ZNF804AQ7Z570 1209 aa21.37■■□□□ 1.01
COMMD3-214ENST00000496071 GMLQ99445 158 aa21.37■■□□□ 1.01
COMMD3-214ENST00000496071 CD209Q9NNX6 404 aa21.37■■□□□ 1.01
COMMD3-214ENST00000496071 RIPOR2Q9Y4F9 1068 aa21.37■■□□□ 1.01
COMMD3-214ENST00000496071 IRS2Q9Y4H2 1338 aa21.36■■□□□ 1.01
COMMD3-214ENST00000496071 USP17L8P0C7I0 530 aa21.36■■□□□ 1.01
COMMD3-214ENST00000496071 KLRK1P26718 216 aa21.36■■□□□ 1.01
COMMD3-214ENST00000496071 ZNF280AP59817 542 aaPredicted RBP21.36■■□□□ 1.01
COMMD3-214ENST00000496071 KIF4BQ2VIQ3 1234 aa21.36■■□□□ 1.01
COMMD3-214ENST00000496071 DACT2Q5SW24 774 aa21.36■■□□□ 1.01
COMMD3-214ENST00000496071 RBM26Q5T8P6 1007 aaKnown RBP21.36■■□□□ 1.01
COMMD3-214ENST00000496071 TTLL5Q6EMB2 1281 aa21.36■■□□□ 1.01
COMMD3-214ENST00000496071 PUS3Q9BZE2 481 aaKnown RBP21.36■■□□□ 1.01
COMMD3-214ENST00000496071 SNAP23O00161 211 aa21.35■■□□□ 1.01
COMMD3-214ENST00000496071 BCAR3O75815 825 aa21.35■■□□□ 1.01
COMMD3-214ENST00000496071 ATF7IPQ6VMQ6 1270 aa21.35■■□□□ 1.01
COMMD3-214ENST00000496071 FRAT1Q92837 279 aaPredicted RBP21.35■■□□□ 1.01
COMMD3-214ENST00000496071 FBXW7Q969H0 707 aa21.35■■□□□ 1.01
COMMD3-214ENST00000496071 OGFOD1Q8N543 542 aa21.34■■□□□ 1.01
COMMD3-214ENST00000496071 DCPSQ96C86 337 aaKnown RBP21.34■■□□□ 1.01
COMMD3-214ENST00000496071 ZNF646O15015 1829 aaPredicted RBP21.34■■□□□ 1.01
COMMD3-214ENST00000496071 TRAF5O00463 557 aa21.33■■□□□ 1.01
COMMD3-214ENST00000496071 EGFRP00533 1210 aa21.33■■□□□ 1.01
COMMD3-214ENST00000496071 IL1R1P14778 569 aa21.33■■□□□ 1.01
COMMD3-214ENST00000496071 GTF2IP78347 998 aa21.33■■□□□ 1.01
COMMD3-214ENST00000496071 GLIS2Q9BZE0 524 aaPredicted RBP21.33■■□□□ 1.01
COMMD3-214ENST00000496071 MKRN1Q9UHC7 482 aaKnown RBP21.33■■□□□ 1.01
COMMD3-214ENST00000496071 GNAI3P08754 354 aa21.32■■□□□ 1
COMMD3-214ENST00000496071 TRIM27P14373 513 aa21.32■■□□□ 1
COMMD3-214ENST00000496071 LRRC24Q50LG9 513 aa21.32■■□□□ 1
COMMD3-214ENST00000496071 METTL24Q5JXM2 366 aa21.32■■□□□ 1
COMMD3-214ENST00000496071 MYOZ2Q9NPC6 264 aa21.32■■□□□ 1
COMMD3-214ENST00000496071 CNTNAP1P78357 1384 aa21.32■■□□□ 1
COMMD3-214ENST00000496071 POLR2AP24928 1970 aaKnown RBP21.32■■□□□ 1
COMMD3-214ENST00000496071 FMR1Q06787 632 aaKnown RBP eCLIP21.31■■□□□ 1
COMMD3-214ENST00000496071 MAPK8IP2Q13387 824 aaPredicted RBP21.31■■□□□ 1
COMMD3-214ENST00000496071 ZKSCAN2Q63HK3 967 aa21.31■■□□□ 1
COMMD3-214ENST00000496071 FBXO3Q9UK99 471 aa21.31■■□□□ 1
COMMD3-214ENST00000496071 ABT1Q9ULW3 272 aaKnown RBP21.31■■□□□ 1
COMMD3-214ENST00000496071 RASSF10A6NK89 507 aa21.3■■□□□ 1
COMMD3-214ENST00000496071 PDE8BO95263 885 aa21.3■■□□□ 1
COMMD3-214ENST00000496071 RFX5P48382 616 aaPredicted RBP21.3■■□□□ 1
COMMD3-214ENST00000496071 DEFB115Q30KQ5 88 aa21.3■■□□□ 1
COMMD3-214ENST00000496071 CST9Q5W186 159 aa21.3■■□□□ 1
COMMD3-214ENST00000496071 KRT26Q7Z3Y9 468 aa21.3■■□□□ 1
COMMD3-214ENST00000496071 USP48Q86UV5 1035 aa21.3■■□□□ 1
COMMD3-214ENST00000496071 KLHDC4Q8TBB5 520 aa21.3■■□□□ 1
COMMD3-214ENST00000496071 MEIS3Q99687 375 aa21.3■■□□□ 1
COMMD3-214ENST00000496071 MXD3Q9BW11 206 aa21.3■■□□□ 1
COMMD3-214ENST00000496071 HDAC9Q9UKV0 1011 aa21.3■■□□□ 1
COMMD3-214ENST00000496071 LRRFIP2Q9Y608 721 aaKnown RBP21.3■■□□□ 1
COMMD3-214ENST00000496071 EYA2O00167 538 aa21.29■■□□□ 1
COMMD3-214ENST00000496071 HIBADHP31937 336 aaKnown RBP21.29■■□□□ 1
COMMD3-214ENST00000496071 FKBP1AP62942 108 aaKnown RBP21.29■■□□□ 1
COMMD3-214ENST00000496071 PTPN12Q05209 780 aaKnown RBP21.29■■□□□ 1
COMMD3-214ENST00000496071 SCARF1Q14162 830 aa21.29■■□□□ 1
COMMD3-214ENST00000496071 SASH1O94885 1247 aa21.28■■□□□ 1
COMMD3-214ENST00000496071 CELF2O95319 508 aaKnown RBP21.28■■□□□ 1
COMMD3-214ENST00000496071 SULF1Q8IWU6 871 aa21.28■■□□□ 1
COMMD3-214ENST00000496071 VGLL2Q8N8G2 317 aa21.28■■□□□ 1
COMMD3-214ENST00000496071 FAM84BQ96KN1 310 aaPredicted RBP21.28■■□□□ 1
COMMD3-214ENST00000496071 GGA3Q9NZ52 723 aa21.28■■□□□ 1
COMMD3-214ENST00000496071 CAVIN4Q5BKX8 364 aa21.27■■□□□ 1
COMMD3-214ENST00000496071 TDRD7Q8NHU6 1098 aaKnown RBP21.27■■□□□ 1
COMMD3-214ENST00000496071 CLUAP1Q96AJ1 413 aa21.27■■□□□ 1
COMMD3-214ENST00000496071 TLL2Q9Y6L7 1015 aa21.27■■□□□ 1
COMMD3-214ENST00000496071 PITPNM2Q9BZ72 1349 aa21.27■□□□□ 0.99
COMMD3-214ENST00000496071 CIAO1O76071 339 aa21.26■□□□□ 0.99
COMMD3-214ENST00000496071 GYG1P46976 350 aa21.26■□□□□ 0.99
COMMD3-214ENST00000496071 VPS37DQ86XT2 251 aa21.26■□□□□ 0.99
COMMD3-214ENST00000496071 KIAA0825Q8IV33 1275 aa21.26■□□□□ 0.99
COMMD3-214ENST00000496071 FAM205AQ6ZU69 1335 aa21.26■□□□□ 0.99
COMMD3-214ENST00000496071 IFIT1P09914 478 aaKnown RBP21.25■□□□□ 0.99
COMMD3-214ENST00000496071 VEGFBP49765 207 aa21.25■□□□□ 0.99
COMMD3-214ENST00000496071 PUM3Q15397 648 aaKnown RBP21.25■□□□□ 0.99
COMMD3-214ENST00000496071 ANGEL2Q5VTE6 544 aaKnown RBP21.25■□□□□ 0.99
COMMD3-214ENST00000496071 FBXO33Q7Z6M2 555 aa21.25■□□□□ 0.99
COMMD3-214ENST00000496071 ZNF408Q9H9D4 720 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms