RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 CAVIN4Q5BKX8 364 aa21.12■□□□□ 0.97
HDAC6-235ENST00000495515 DPY19L2Q6NUT2 758 aa21.12■□□□□ 0.97
HDAC6-235ENST00000495515 ZNF804AQ7Z570 1209 aa21.12■□□□□ 0.97
HDAC6-235ENST00000495515 COA1Q9GZY4 146 aa21.12■□□□□ 0.97
HDAC6-235ENST00000495515 EXOC6BQ9Y2D4 811 aa21.12■□□□□ 0.97
HDAC6-235ENST00000495515 FZD9O00144 591 aa21.11■□□□□ 0.97
HDAC6-235ENST00000495515 ECE2O60344 883 aa21.11■□□□□ 0.97
HDAC6-235ENST00000495515 FGFR2P21802 821 aa21.11■□□□□ 0.97
HDAC6-235ENST00000495515 DOK7Q18PE1 504 aa21.11■□□□□ 0.97
HDAC6-235ENST00000495515 PODNQ7Z5L7 613 aa21.11■□□□□ 0.97
HDAC6-235ENST00000495515 DBNDD1Q9H9R9 158 aa21.11■□□□□ 0.97
HDAC6-235ENST00000495515 SASH1O94885 1247 aa21.1■□□□□ 0.97
HDAC6-235ENST00000495515 VPS37DQ86XT2 251 aa21.1■□□□□ 0.97
HDAC6-235ENST00000495515 GPR108Q9NPR9 543 aa21.1■□□□□ 0.97
HDAC6-235ENST00000495515 KLRK1P26718 216 aa21.09■□□□□ 0.97
HDAC6-235ENST00000495515 HIBADHP31937 336 aaKnown RBP21.09■□□□□ 0.97
HDAC6-235ENST00000495515 TXNRD3Q86VQ6 643 aa21.09■□□□□ 0.97
HDAC6-235ENST00000495515 KIF1BPQ96EK5 621 aa21.09■□□□□ 0.97
HDAC6-235ENST00000495515 SBF1O95248 1867 aa21.09■□□□□ 0.97
HDAC6-235ENST00000495515 HDAC1Q13547 482 aaPredicted RBP21.08■□□□□ 0.97
HDAC6-235ENST00000495515 TNIP1Q15025 636 aa21.08■□□□□ 0.97
HDAC6-235ENST00000495515 RWDD1Q9H446 243 aaPredicted RBP21.08■□□□□ 0.97
HDAC6-235ENST00000495515 DCTPP1Q9H773 170 aa21.08■□□□□ 0.97
HDAC6-235ENST00000495515 IRS2Q9Y4H2 1338 aa21.07■□□□□ 0.96
HDAC6-235ENST00000495515 A0A1B0GUL7 405 aa21.07■□□□□ 0.96
HDAC6-235ENST00000495515 C1QTNF8P60827 252 aa21.07■□□□□ 0.96
HDAC6-235ENST00000495515 RHPN1Q8TCX5 695 aa21.07■□□□□ 0.96
HDAC6-235ENST00000495515 NEUROD6Q96NK8 337 aa21.07■□□□□ 0.96
HDAC6-235ENST00000495515 CD209Q9NNX6 404 aa21.07■□□□□ 0.96
HDAC6-235ENST00000495515 KDM2BQ8NHM5 1336 aa21.06■□□□□ 0.96
HDAC6-235ENST00000495515 GLTPD2A6NH11 291 aa21.06■□□□□ 0.96
HDAC6-235ENST00000495515 GYG1P46976 350 aa21.06■□□□□ 0.96
HDAC6-235ENST00000495515 CIAPIN1Q6FI81 312 aa21.06■□□□□ 0.96
HDAC6-235ENST00000495515 FAM84BQ96KN1 310 aaPredicted RBP21.06■□□□□ 0.96
HDAC6-235ENST00000495515 GNL3LQ9NVN8 582 aaKnown RBP21.06■□□□□ 0.96
HDAC6-235ENST00000495515 YDJCA8MPS7 323 aa21.05■□□□□ 0.96
HDAC6-235ENST00000495515 APBB1O00213 710 aa21.05■□□□□ 0.96
HDAC6-235ENST00000495515 IL1R1P14778 569 aa21.05■□□□□ 0.96
HDAC6-235ENST00000495515 TIMM10P62072 90 aa21.05■□□□□ 0.96
HDAC6-235ENST00000495515 CXCL9Q07325 125 aa21.05■□□□□ 0.96
HDAC6-235ENST00000495515 TNNI3KQ59H18 835 aa21.05■□□□□ 0.96
HDAC6-235ENST00000495515 GORABQ5T7V8 394 aa21.05■□□□□ 0.96
HDAC6-235ENST00000495515 FBXO33Q7Z6M2 555 aa21.05■□□□□ 0.96
HDAC6-235ENST00000495515 GPC2Q8N158 579 aa21.05■□□□□ 0.96
HDAC6-235ENST00000495515 CLASRPQ8N2M8 674 aaKnown RBP21.05■□□□□ 0.96
HDAC6-235ENST00000495515 FPGT-TNNI3KV9GXZ4 949 aa21.05■□□□□ 0.96
HDAC6-235ENST00000495515 COL4A5P29400 1685 aa21.05■□□□□ 0.96
HDAC6-235ENST00000495515 ZNF541Q9H0D2 1346 aa21.04■□□□□ 0.96
HDAC6-235ENST00000495515 DICER1Q9UPY3 1922 aaKnown RBP21.04■□□□□ 0.96
HDAC6-235ENST00000495515 FRAT2O75474 233 aaPredicted RBP21.04■□□□□ 0.96
HDAC6-235ENST00000495515 RAD17O75943 681 aa21.04■□□□□ 0.96
HDAC6-235ENST00000495515 GCC1Q96CN9 775 aa21.04■□□□□ 0.96
HDAC6-235ENST00000495515 XAGE2Q96GT9 111 aa21.04■□□□□ 0.96
HDAC6-235ENST00000495515 LRRCC1Q9C099 1032 aa21.04■□□□□ 0.96
HDAC6-235ENST00000495515 GJA3Q9Y6H8 435 aa21.04■□□□□ 0.96
HDAC6-235ENST00000495515 A0A1B0GUL6 1792 aa21.04■□□□□ 0.96
HDAC6-235ENST00000495515 CCDC88AQ3V6T2 1871 aa21.03■□□□□ 0.96
HDAC6-235ENST00000495515 USP17L3A6NCW0 530 aa21.03■□□□□ 0.96
HDAC6-235ENST00000495515 USP17L4A6NCW7 530 aa21.03■□□□□ 0.96
HDAC6-235ENST00000495515 BCAMP50895 628 aa21.03■□□□□ 0.96
HDAC6-235ENST00000495515 USP17L1Q7RTZ2 530 aa21.03■□□□□ 0.96
HDAC6-235ENST00000495515 GPBP1L1Q9HC44 474 aaPredicted RBP21.03■□□□□ 0.96
HDAC6-235ENST00000495515 ZBTB47Q9UFB7 747 aaPredicted RBP21.03■□□□□ 0.96
HDAC6-235ENST00000495515 TIAM2Q8IVF5 1701 aa21.03■□□□□ 0.96
HDAC6-235ENST00000495515 ZNF609O15014 1411 aa21.03■□□□□ 0.96
HDAC6-235ENST00000495515 DDNO94850 711 aaPredicted RBP21.02■□□□□ 0.96
HDAC6-235ENST00000495515 STRIP1Q5VSL9 837 aa21.02■□□□□ 0.96
HDAC6-235ENST00000495515 TDRD7Q8NHU6 1098 aaKnown RBP21.02■□□□□ 0.96
HDAC6-235ENST00000495515 IL1RAPL2Q9NP60 686 aa21.02■□□□□ 0.96
HDAC6-235ENST00000495515 TTLL5Q6EMB2 1281 aa21.01■□□□□ 0.95
HDAC6-235ENST00000495515 AACSQ86V21 672 aa21.01■□□□□ 0.95
HDAC6-235ENST00000495515 ZNF526Q8TF50 670 aaPredicted RBP21.01■□□□□ 0.95
HDAC6-235ENST00000495515 FBXW7Q969H0 707 aa21.01■□□□□ 0.95
HDAC6-235ENST00000495515 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.01■□□□□ 0.95
HDAC6-235ENST00000495515 PSMD14O00487 310 aa21■□□□□ 0.95
HDAC6-235ENST00000495515 SEMA3EO15041 775 aa21■□□□□ 0.95
HDAC6-235ENST00000495515 VIL1P09327 827 aaKnown RBP21■□□□□ 0.95
HDAC6-235ENST00000495515 IFIT2P09913 472 aaKnown RBP21■□□□□ 0.95
HDAC6-235ENST00000495515 ADORA1P30542 326 aa21■□□□□ 0.95
HDAC6-235ENST00000495515 CCDC158Q5M9N0 1113 aa21■□□□□ 0.95
HDAC6-235ENST00000495515 CCDC102BQ68D86 513 aa21■□□□□ 0.95
HDAC6-235ENST00000495515 EAF2Q96CJ1 260 aaPredicted RBP21■□□□□ 0.95
HDAC6-235ENST00000495515 KCNQ5Q9NR82 932 aa21■□□□□ 0.95
HDAC6-235ENST00000495515 RPS12P25398 132 aaKnown RBP20.99■□□□□ 0.95
HDAC6-235ENST00000495515 GTF2IP78347 998 aa20.99■□□□□ 0.95
HDAC6-235ENST00000495515 L3MBTL3Q96JM7 780 aaPredicted RBP20.99■□□□□ 0.95
HDAC6-235ENST00000495515 MYO3BQ8WXR4 1341 aa20.99■□□□□ 0.95
HDAC6-235ENST00000495515 IQCA1LA6NCM1 817 aa20.98■□□□□ 0.95
HDAC6-235ENST00000495515 ZBTB22O15209 634 aa20.98■□□□□ 0.95
HDAC6-235ENST00000495515 UQCRFS1P1P0C7P4 283 aa20.98■□□□□ 0.95
HDAC6-235ENST00000495515 LMOD1P29536 600 aaPredicted RBP20.98■□□□□ 0.95
HDAC6-235ENST00000495515 PHKA1P46020 1223 aa20.98■□□□□ 0.95
HDAC6-235ENST00000495515 RSBN1LQ6PCB5 846 aaPredicted RBP20.98■□□□□ 0.95
HDAC6-235ENST00000495515 AGBL3Q8NEM8 1001 aa20.98■□□□□ 0.95
HDAC6-235ENST00000495515 DBNDD2Q9BQY9 259 aa20.98■□□□□ 0.95
HDAC6-235ENST00000495515 CCDC8Q9H0W5 538 aaPredicted RBP20.98■□□□□ 0.95
HDAC6-235ENST00000495515 DENND2AQ9ULE3 1009 aa20.98■□□□□ 0.95
HDAC6-235ENST00000495515 FAM205AQ6ZU69 1335 aa20.98■□□□□ 0.95
HDAC6-235ENST00000495515 FKBP1AP62942 108 aaKnown RBP20.97■□□□□ 0.95
HDAC6-235ENST00000495515 TTC39AQ5SRH9 613 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms