RNA–Protein interactions for RNA: ENST00000494945.1

PKP4-215, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-215ENST00000494945 ARID4AP29374 1257 aaPredicted RBP13.39□□□□□ -0.27
PKP4-215ENST00000494945 KCNJ4P48050 445 aa13.39□□□□□ -0.27
PKP4-215ENST00000494945 CCDC102BQ68D86 513 aa13.39□□□□□ -0.27
PKP4-215ENST00000494945 C2CD5Q86YS7 1000 aa13.39□□□□□ -0.27
PKP4-215ENST00000494945 LEMD3Q9Y2U8 911 aa13.39□□□□□ -0.27
PKP4-215ENST00000494945 RBM19Q9Y4C8 960 aaKnown RBP13.39□□□□□ -0.27
PKP4-215ENST00000494945 DUOX1Q9NRD9 1551 aa13.39□□□□□ -0.27
PKP4-215ENST00000494945 PPEF1O14829 653 aaPredicted RBP13.38□□□□□ -0.27
PKP4-215ENST00000494945 R3HDM1Q15032 1099 aaKnown RBP13.38□□□□□ -0.27
PKP4-215ENST00000494945 SP8Q8IXZ3 490 aa13.38□□□□□ -0.27
PKP4-215ENST00000494945 DNAJC2Q99543 621 aaKnown RBP13.38□□□□□ -0.27
PKP4-215ENST00000494945 PAG1Q9NWQ8 432 aa13.38□□□□□ -0.27
PKP4-215ENST00000494945 FER1L6Q2WGJ9 1857 aa13.38□□□□□ -0.27
PKP4-215ENST00000494945 ZNF804BA4D1E1 1349 aa13.38□□□□□ -0.27
PKP4-215ENST00000494945 MYH2Q9UKX2 1941 aa13.37□□□□□ -0.27
PKP4-215ENST00000494945 ZNF646O15015 1829 aaPredicted RBP13.37□□□□□ -0.27
PKP4-215ENST00000494945 ZBTB22O15209 634 aa13.37□□□□□ -0.27
PKP4-215ENST00000494945 POLD1P28340 1107 aa13.37□□□□□ -0.27
PKP4-215ENST00000494945 PHKA1P46020 1223 aa13.37□□□□□ -0.27
PKP4-215ENST00000494945 CAVIN4Q5BKX8 364 aa13.37□□□□□ -0.27
PKP4-215ENST00000494945 FSD1Q9BTV5 496 aa13.37□□□□□ -0.27
PKP4-215ENST00000494945 PODXL2Q9NZ53 605 aa13.37□□□□□ -0.27
PKP4-215ENST00000494945 ANKIB1Q9P2G1 1089 aa13.37□□□□□ -0.27
PKP4-215ENST00000494945 ATP6V0A2Q9Y487 856 aa13.37□□□□□ -0.27
PKP4-215ENST00000494945 SNAP23O00161 211 aa13.36□□□□□ -0.27
PKP4-215ENST00000494945 REC8O95072 547 aa13.36□□□□□ -0.27
PKP4-215ENST00000494945 ZBTB7AO95365 584 aa13.36□□□□□ -0.27
PKP4-215ENST00000494945 ATP2B4P23634 1241 aa13.36□□□□□ -0.27
PKP4-215ENST00000494945 MCAMP43121 646 aa13.36□□□□□ -0.27
PKP4-215ENST00000494945 MFAP1P55081 439 aaKnown RBP13.36□□□□□ -0.27
PKP4-215ENST00000494945 C15orf52Q6ZUT6 534 aaKnown RBP13.36□□□□□ -0.27
PKP4-215ENST00000494945 KBTBD3Q8NAB2 608 aa13.36□□□□□ -0.27
PKP4-215ENST00000494945 RUFY2Q8WXA3 655 aa13.36□□□□□ -0.27
PKP4-215ENST00000494945 CNKSR1Q969H4 720 aa13.36□□□□□ -0.27
PKP4-215ENST00000494945 ESYT1Q9BSJ8 1104 aa13.36□□□□□ -0.27
PKP4-215ENST00000494945 DIAPH3Q9NSV4 1193 aa13.36□□□□□ -0.27
PKP4-215ENST00000494945 GNL3LQ9NVN8 582 aaKnown RBP13.36□□□□□ -0.27
PKP4-215ENST00000494945 LAMA4Q16363 1823 aa13.36□□□□□ -0.27
PKP4-215ENST00000494945 CDK5RAP2Q96SN8 1893 aa13.36□□□□□ -0.27
PKP4-215ENST00000494945 GOLIM4O00461 696 aa13.35□□□□□ -0.27
PKP4-215ENST00000494945 SEMA3EO15041 775 aa13.35□□□□□ -0.27
PKP4-215ENST00000494945 GPSM2P81274 684 aa13.35□□□□□ -0.27
PKP4-215ENST00000494945 FKBP4Q02790 459 aaKnown RBP eCLIP13.35□□□□□ -0.27
PKP4-215ENST00000494945 SCARF1Q14162 830 aa13.35□□□□□ -0.27
PKP4-215ENST00000494945 TTF1Q15361 905 aaPredicted RBP13.35□□□□□ -0.27
PKP4-215ENST00000494945 LRRFIP1Q32MZ4 808 aaKnown RBP13.35□□□□□ -0.27
PKP4-215ENST00000494945 ZNF622Q969S3 477 aaKnown RBP eCLIP13.35□□□□□ -0.274e-9■□□□□ 11
PKP4-215ENST00000494945 TMX4Q9H1E5 349 aaPredicted RBP13.35□□□□□ -0.27
PKP4-215ENST00000494945 RAD50Q92878 1312 aa13.35□□□□□ -0.27
PKP4-215ENST00000494945 IRS2Q9Y4H2 1338 aa13.35□□□□□ -0.27
PKP4-215ENST00000494945 EPB41L2O43491 1005 aaKnown RBP13.34□□□□□ -0.27
PKP4-215ENST00000494945 BCAMP50895 628 aa13.34□□□□□ -0.27
PKP4-215ENST00000494945 FBXO33Q7Z6M2 555 aa13.34□□□□□ -0.27
PKP4-215ENST00000494945 VPS37DQ86XT2 251 aa13.34□□□□□ -0.27
PKP4-215ENST00000494945 SPATA5Q8NB90 893 aa13.34□□□□□ -0.27
PKP4-215ENST00000494945 EDC3Q96F86 508 aaKnown RBP13.34□□□□□ -0.27
PKP4-215ENST00000494945 FAM84BQ96KN1 310 aaPredicted RBP13.34□□□□□ -0.27
PKP4-215ENST00000494945 HMG20BQ9P0W2 317 aa13.34□□□□□ -0.27
PKP4-215ENST00000494945 GGA1Q9UJY5 639 aa13.34□□□□□ -0.27
PKP4-215ENST00000494945 NSFL1CQ9UNZ2 370 aaKnown RBP13.34□□□□□ -0.27
PKP4-215ENST00000494945 NDUFB9Q9Y6M9 179 aa13.34□□□□□ -0.27
PKP4-215ENST00000494945 PDS5AQ29RF7 1337 aaKnown RBP13.34□□□□□ -0.27
PKP4-215ENST00000494945 MED23Q9ULK4 1368 aa13.33□□□□□ -0.27
PKP4-215ENST00000494945 SGSM2O43147 1006 aa13.33□□□□□ -0.28
PKP4-215ENST00000494945 CHRNA5P30532 468 aa13.33□□□□□ -0.28
PKP4-215ENST00000494945 HIBADHP31937 336 aaKnown RBP13.33□□□□□ -0.28
PKP4-215ENST00000494945 ZAP70P43403 619 aa13.33□□□□□ -0.28
PKP4-215ENST00000494945 GYG1P46976 350 aa13.33□□□□□ -0.28
PKP4-215ENST00000494945 RASGRF1Q13972 1273 aa13.33□□□□□ -0.28
PKP4-215ENST00000494945 CWC27Q6UX04 472 aaKnown RBP13.33□□□□□ -0.28
PKP4-215ENST00000494945 TBC1D32Q96NH3 1257 aa13.33□□□□□ -0.28
PKP4-215ENST00000494945 SNRKQ9NRH2 765 aa13.33□□□□□ -0.28
PKP4-215ENST00000494945 ATF5Q9Y2D1 282 aaPredicted RBP13.33□□□□□ -0.28
PKP4-215ENST00000494945 ECM29Q5VYK3 1845 aa13.32□□□□□ -0.28
PKP4-215ENST00000494945 COL1A1P02452 1464 aaPredicted RBP13.32□□□□□ -0.28
PKP4-215ENST00000494945 WTIPA6NIX2 430 aaPredicted RBP13.32□□□□□ -0.28
PKP4-215ENST00000494945 UFL1O94874 794 aa13.32□□□□□ -0.28
PKP4-215ENST00000494945 CYP2E1P05181 493 aaPredicted RBP13.32□□□□□ -0.28
PKP4-215ENST00000494945 ZFYP08048 801 aaPredicted RBP13.32□□□□□ -0.28
PKP4-215ENST00000494945 TGFB2P61812 414 aa13.32□□□□□ -0.28
PKP4-215ENST00000494945 NMIQ13287 307 aaPredicted RBP13.32□□□□□ -0.28
PKP4-215ENST00000494945 CC2D2BQ6DHV5 1058 aa13.32□□□□□ -0.28
PKP4-215ENST00000494945 ZSCAN25Q6NSZ9 544 aa13.32□□□□□ -0.28
PKP4-215ENST00000494945 PRPF40BQ6NWY9 871 aaKnown RBP13.32□□□□□ -0.28
PKP4-215ENST00000494945 TBC1D16Q8TBP0 767 aa13.32□□□□□ -0.28
PKP4-215ENST00000494945 SGIP1Q9BQI5 828 aa13.32□□□□□ -0.28
PKP4-215ENST00000494945 C22orf23Q9BZE7 217 aa13.32□□□□□ -0.28
PKP4-215ENST00000494945 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.32□□□□□ -0.28
PKP4-215ENST00000494945 ANTXR1Q9H6X2 564 aa13.32□□□□□ -0.28
PKP4-215ENST00000494945 DENND2AQ9ULE3 1009 aa13.32□□□□□ -0.28
PKP4-215ENST00000494945 SCN9AQ15858 1988 aa13.32□□□□□ -0.28
PKP4-215ENST00000494945 FOCADQ5VW36 1801 aa13.32□□□□□ -0.28
PKP4-215ENST00000494945 DICER1Q9UPY3 1922 aaKnown RBP13.31□□□□□ -0.28
PKP4-215ENST00000494945 PSDA5PKW4 1024 aaPredicted RBP13.31□□□□□ -0.28
PKP4-215ENST00000494945 RNF113AO15541 343 aaKnown RBP13.31□□□□□ -0.28
PKP4-215ENST00000494945 KLRK1P26718 216 aa13.31□□□□□ -0.28
PKP4-215ENST00000494945 RBM25P49756 843 aaKnown RBP13.31□□□□□ -0.28
PKP4-215ENST00000494945 GRIPAP1Q4V328 841 aa13.31□□□□□ -0.28
PKP4-215ENST00000494945 PI16Q6UXB8 463 aa13.31□□□□□ -0.28
PKP4-215ENST00000494945 ZNF804AQ7Z570 1209 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms