RNA–Protein interactions for RNA: ENST00000494938.2

SCAP-213, Transcript of SREBF chaperone, humanhuman

TSL 4

Gene SCAP, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-213ENST00000494938 CLEC11AQ9Y240 323 aa18■□□□□ 0.47
SCAP-213ENST00000494938 USP17L3A6NCW0 530 aa17.99■□□□□ 0.47
SCAP-213ENST00000494938 USP17L4A6NCW7 530 aa17.99■□□□□ 0.47
SCAP-213ENST00000494938 ITGBL1O95965 494 aaPredicted RBP17.99■□□□□ 0.47
SCAP-213ENST00000494938 RPS12P25398 132 aaKnown RBP17.99■□□□□ 0.47
SCAP-213ENST00000494938 HIRAP54198 1017 aaPredicted RBP17.99■□□□□ 0.47
SCAP-213ENST00000494938 USP17L1Q7RTZ2 530 aa17.99■□□□□ 0.47
SCAP-213ENST00000494938 GMLQ99445 158 aa17.99■□□□□ 0.47
SCAP-213ENST00000494938 MROH5Q6ZUA9 1318 aa17.98■□□□□ 0.47
SCAP-213ENST00000494938 MYH3P11055 1940 aa17.98■□□□□ 0.47
SCAP-213ENST00000494938 UBE4AQ14139 1066 aa17.98■□□□□ 0.47
SCAP-213ENST00000494938 RSBN1LQ6PCB5 846 aaPredicted RBP17.98■□□□□ 0.47
SCAP-213ENST00000494938 MICALL2Q8IY33 904 aa17.98■□□□□ 0.47
SCAP-213ENST00000494938 DZIP1LQ8IYY4 767 aaKnown RBP17.98■□□□□ 0.47
SCAP-213ENST00000494938 CD209Q9NNX6 404 aa17.98■□□□□ 0.47
SCAP-213ENST00000494938 H7C1D1 291 aa17.97■□□□□ 0.47
SCAP-213ENST00000494938 EYA2O00167 538 aa17.97■□□□□ 0.47
SCAP-213ENST00000494938 APLP1P51693 650 aa17.97■□□□□ 0.47
SCAP-213ENST00000494938 DACT2Q5SW24 774 aa17.97■□□□□ 0.47
SCAP-213ENST00000494938 MAP1SQ66K74 1059 aaPredicted RBP17.97■□□□□ 0.47
SCAP-213ENST00000494938 ATG9AQ7Z3C6 839 aa17.97■□□□□ 0.47
SCAP-213ENST00000494938 CNTROBQ8N137 903 aa17.97■□□□□ 0.47
SCAP-213ENST00000494938 VGLL2Q8N8G2 317 aa17.97■□□□□ 0.47
SCAP-213ENST00000494938 MXD3Q9BW11 206 aa17.97■□□□□ 0.47
SCAP-213ENST00000494938 PGAP2Q9UHJ9 254 aa17.97■□□□□ 0.47
SCAP-213ENST00000494938 ZBTB7BO15156 539 aaPredicted RBP17.96■□□□□ 0.47
SCAP-213ENST00000494938 EGFRP00533 1210 aa17.96■□□□□ 0.47
SCAP-213ENST00000494938 GNAI2P04899 355 aa17.96■□□□□ 0.47
SCAP-213ENST00000494938 METTL24Q5JXM2 366 aa17.96■□□□□ 0.47
SCAP-213ENST00000494938 STRIP1Q5VSL9 837 aa17.96■□□□□ 0.47
SCAP-213ENST00000494938 SAMD7Q7Z3H4 446 aa17.96■□□□□ 0.47
SCAP-213ENST00000494938 AGBL3Q8NEM8 1001 aa17.96■□□□□ 0.47
SCAP-213ENST00000494938 TRPM4Q8TD43 1214 aa17.96■□□□□ 0.47
SCAP-213ENST00000494938 RCAN3Q9UKA8 241 aa17.96■□□□□ 0.47
SCAP-213ENST00000494938 PDE8BO95263 885 aa17.95■□□□□ 0.46
SCAP-213ENST00000494938 IL1R1P14778 569 aa17.95■□□□□ 0.46
SCAP-213ENST00000494938 ZNF280AP59817 542 aaPredicted RBP17.95■□□□□ 0.46
SCAP-213ENST00000494938 HTRA3P83110 453 aa17.95■□□□□ 0.46
SCAP-213ENST00000494938 MTX1Q13505 466 aa17.95■□□□□ 0.46
SCAP-213ENST00000494938 TTLL5Q6EMB2 1281 aa17.95■□□□□ 0.46
SCAP-213ENST00000494938 DNAJC5GQ8N7S2 189 aa17.95■□□□□ 0.46
SCAP-213ENST00000494938 FAM84BQ96KN1 310 aaPredicted RBP17.95■□□□□ 0.46
SCAP-213ENST00000494938 PA2G4Q9UQ80 394 aaKnown RBP17.95■□□□□ 0.46
SCAP-213ENST00000494938 PASKQ96RG2 1323 aa17.95■□□□□ 0.46
SCAP-213ENST00000494938 SCN4AP35499 1836 aa17.94■□□□□ 0.46
SCAP-213ENST00000494938 GTF2IP78347 998 aa17.94■□□□□ 0.46
SCAP-213ENST00000494938 FBXO33Q7Z6M2 555 aa17.94■□□□□ 0.46
SCAP-213ENST00000494938 FTSJ3Q8IY81 847 aaKnown RBP17.94■□□□□ 0.46
SCAP-213ENST00000494938 PANK1Q8TE04 598 aa17.94■□□□□ 0.46
SCAP-213ENST00000494938 COPRSQ9NQ92 184 aa17.94■□□□□ 0.46
SCAP-213ENST00000494938 FBXO3Q9UK99 471 aa17.94■□□□□ 0.46
SCAP-213ENST00000494938 CIAO1O76071 339 aa17.93■□□□□ 0.46
SCAP-213ENST00000494938 FGFR2P21802 821 aa17.93■□□□□ 0.46
SCAP-213ENST00000494938 GYG1P46976 350 aa17.93■□□□□ 0.46
SCAP-213ENST00000494938 TBC1D10BQ4KMP7 808 aaPredicted RBP17.93■□□□□ 0.46
SCAP-213ENST00000494938 ZC3H15Q8WU90 426 aaKnown RBP17.93■□□□□ 0.46
SCAP-213ENST00000494938 SIL1Q9H173 461 aa17.93■□□□□ 0.46
SCAP-213ENST00000494938 SRGAP3O43295 1099 aa17.92■□□□□ 0.46
SCAP-213ENST00000494938 USP17L8P0C7I0 530 aa17.92■□□□□ 0.46
SCAP-213ENST00000494938 HIBADHP31937 336 aaKnown RBP17.92■□□□□ 0.46
SCAP-213ENST00000494938 RBM26Q5T8P6 1007 aaKnown RBP17.92■□□□□ 0.46
SCAP-213ENST00000494938 ZNF804AQ7Z570 1209 aa17.92■□□□□ 0.46
SCAP-213ENST00000494938 TDRD7Q8NHU6 1098 aaKnown RBP17.92■□□□□ 0.46
SCAP-213ENST00000494938 ZNF609O15014 1411 aa17.91■□□□□ 0.46
SCAP-213ENST00000494938 PNMA6EA0A0J9YXQ4 647 aa17.91■□□□□ 0.46
SCAP-213ENST00000494938 SASH1O94885 1247 aa17.91■□□□□ 0.46
SCAP-213ENST00000494938 FMR1Q06787 632 aaKnown RBP eCLIP17.91■□□□□ 0.46
SCAP-213ENST00000494938 ITPRIPQ8IWB1 547 aa17.91■□□□□ 0.46
SCAP-213ENST00000494938 FBXW7Q969H0 707 aa17.91■□□□□ 0.46
SCAP-213ENST00000494938 IL15P40933 162 aaPredicted RBP17.9■□□□□ 0.46
SCAP-213ENST00000494938 CERS5Q8N5B7 392 aa17.9■□□□□ 0.46
SCAP-213ENST00000494938 CEP126Q9P2H0 1117 aa17.9■□□□□ 0.46
SCAP-213ENST00000494938 SCN9AQ15858 1988 aa17.9■□□□□ 0.46
SCAP-213ENST00000494938 ADAMTSL1Q8N6G6 1762 aa17.89■□□□□ 0.45
SCAP-213ENST00000494938 SPEF2Q9C093 1822 aa17.89■□□□□ 0.45
SCAP-213ENST00000494938 BCAMP50895 628 aa17.89■□□□□ 0.45
SCAP-213ENST00000494938 ATP8B2P98198 1209 aa17.89■□□□□ 0.45
SCAP-213ENST00000494938 PUM3Q15397 648 aaKnown RBP17.89■□□□□ 0.45
SCAP-213ENST00000494938 MYOZ2Q9NPC6 264 aa17.89■□□□□ 0.45
SCAP-213ENST00000494938 TRAF5O00463 557 aa17.88■□□□□ 0.45
SCAP-213ENST00000494938 MS4A1P11836 297 aa17.88■□□□□ 0.45
SCAP-213ENST00000494938 SCARF1Q14162 830 aa17.88■□□□□ 0.45
SCAP-213ENST00000494938 POLA2Q14181 598 aa17.88■□□□□ 0.45
SCAP-213ENST00000494938 KIF4BQ2VIQ3 1234 aa17.88■□□□□ 0.45
SCAP-213ENST00000494938 LPIN2Q92539 896 aa17.88■□□□□ 0.45
SCAP-213ENST00000494938 GLIS2Q9BZE0 524 aaPredicted RBP17.88■□□□□ 0.45
SCAP-213ENST00000494938 C1orf115Q9H7X2 142 aa17.88■□□□□ 0.45
SCAP-213ENST00000494938 JAG2Q9Y219 1238 aa17.88■□□□□ 0.45
SCAP-213ENST00000494938 ASTN2O75129 1339 aaPredicted RBP17.88■□□□□ 0.45
SCAP-213ENST00000494938 FAM205AQ6ZU69 1335 aa17.88■□□□□ 0.45
SCAP-213ENST00000494938 MYO3BQ8WXR4 1341 aa17.88■□□□□ 0.45
SCAP-213ENST00000494938 IFIT1P09914 478 aaKnown RBP17.87■□□□□ 0.45
SCAP-213ENST00000494938 FKBP1AP62942 108 aaKnown RBP17.87■□□□□ 0.45
SCAP-213ENST00000494938 CST9Q5W186 159 aa17.87■□□□□ 0.45
SCAP-213ENST00000494938 DLK2Q6UY11 383 aa17.87■□□□□ 0.45
SCAP-213ENST00000494938 USP48Q86UV5 1035 aa17.87■□□□□ 0.45
SCAP-213ENST00000494938 YTHDC1Q96MU7 727 aaKnown RBP17.87■□□□□ 0.45
SCAP-213ENST00000494938 CREBZFQ9NS37 354 aa17.87■□□□□ 0.45
SCAP-213ENST00000494938 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.87■□□□□ 0.45
SCAP-213ENST00000494938 MMP14P50281 582 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms