RNA–Protein interactions for RNA: ENST00000494854.5

SHISA5-216, Transcript of shisa family member 5, humanhuman

TSL 1 (best)

Gene SHISA5, Length 1,908 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-216ENST00000494854 HOXA10P31260 410 aaPredicted RBP18.78■□□□□ 0.6
SHISA5-216ENST00000494854 RASSF7Q02833 373 aa18.78■□□□□ 0.6
SHISA5-216ENST00000494854 IL27Q8NEV9 243 aa18.78■□□□□ 0.6
SHISA5-216ENST00000494854 CWC22Q9HCG8 908 aaKnown RBP18.78■□□□□ 0.6
SHISA5-216ENST00000494854 DDX11L8A8MPP1 907 aa18.78■□□□□ 0.6
SHISA5-216ENST00000494854 ATP5JP18859 108 aa18.78■□□□□ 0.6
SHISA5-216ENST00000494854 ATG9AQ7Z3C6 839 aa18.78■□□□□ 0.6
SHISA5-216ENST00000494854 PRELPP51888 382 aa18.77■□□□□ 0.6
SHISA5-216ENST00000494854 C1QTNF8P60827 252 aa18.77■□□□□ 0.6
SHISA5-216ENST00000494854 GBP4Q96PP9 640 aa18.77■□□□□ 0.6
SHISA5-216ENST00000494854 FSD1Q9BTV5 496 aa18.77■□□□□ 0.6
SHISA5-216ENST00000494854 SNX14Q9Y5W7 946 aa18.77■□□□□ 0.6
SHISA5-216ENST00000494854 PCCAP05165 728 aaPredicted RBP18.76■□□□□ 0.59
SHISA5-216ENST00000494854 IL15P40933 162 aaPredicted RBP18.76■□□□□ 0.59
SHISA5-216ENST00000494854 ZNF526Q8TF50 670 aaPredicted RBP18.76■□□□□ 0.59
SHISA5-216ENST00000494854 TMX3Q96JJ7 454 aa18.76■□□□□ 0.59
SHISA5-216ENST00000494854 DBNDD2Q9BQY9 259 aa18.76■□□□□ 0.59
SHISA5-216ENST00000494854 ZNF219Q9P2Y4 722 aaPredicted RBP18.76■□□□□ 0.59
SHISA5-216ENST00000494854 MYH3P11055 1940 aa18.76■□□□□ 0.59
SHISA5-216ENST00000494854 NMIQ13287 307 aaPredicted RBP18.76■□□□□ 0.59
SHISA5-216ENST00000494854 NLRP3Q96P20 1036 aa18.76■□□□□ 0.59
SHISA5-216ENST00000494854 UPF3BQ9BZI7 483 aaKnown RBP18.76■□□□□ 0.59
SHISA5-216ENST00000494854 DICER1Q9UPY3 1922 aaKnown RBP18.75■□□□□ 0.59
SHISA5-216ENST00000494854 EYA2O00167 538 aa18.75■□□□□ 0.59
SHISA5-216ENST00000494854 NUCB2P80303 420 aa18.75■□□□□ 0.59
SHISA5-216ENST00000494854 PTH1RQ03431 593 aa18.75■□□□□ 0.59
SHISA5-216ENST00000494854 ZGPATQ8N5A5 531 aaKnown RBP18.75■□□□□ 0.59
SHISA5-216ENST00000494854 FAM227BQ96M60 508 aa18.75■□□□□ 0.59
SHISA5-216ENST00000494854 GPR108Q9NPR9 543 aa18.75■□□□□ 0.59
SHISA5-216ENST00000494854 CCDC93Q567U6 631 aa18.74■□□□□ 0.59
SHISA5-216ENST00000494854 ZBTB38Q8NAP3 1195 aaPredicted RBP18.74■□□□□ 0.59
SHISA5-216ENST00000494854 RPGRQ92834 1020 aaKnown RBP18.74■□□□□ 0.59
SHISA5-216ENST00000494854 CRAMP1Q96RY5 1269 aa18.74■□□□□ 0.59
SHISA5-216ENST00000494854 PLA2G12BQ9BX93 195 aa18.74■□□□□ 0.59
SHISA5-216ENST00000494854 TAOK3Q9H2K8 898 aa18.74■□□□□ 0.59
SHISA5-216ENST00000494854 SNRKQ9NRH2 765 aa18.74■□□□□ 0.59
SHISA5-216ENST00000494854 CCDC171Q6TFL3 1326 aa18.74■□□□□ 0.59
SHISA5-216ENST00000494854 CIAO1O76071 339 aa18.74■□□□□ 0.59
SHISA5-216ENST00000494854 RASEFQ8IZ41 740 aa18.74■□□□□ 0.59
SHISA5-216ENST00000494854 FAM89AQ96GI7 184 aa18.74■□□□□ 0.59
SHISA5-216ENST00000494854 ZNF594Q96JF6 807 aaPredicted RBP18.74■□□□□ 0.59
SHISA5-216ENST00000494854 TRMT112Q9UI30 125 aaKnown RBP18.74■□□□□ 0.59
SHISA5-216ENST00000494854 SH3TC1Q8TE82 1336 aa18.73■□□□□ 0.59
SHISA5-216ENST00000494854 KIF3CO14782 793 aa18.73■□□□□ 0.59
SHISA5-216ENST00000494854 CUL4AQ13619 759 aa18.73■□□□□ 0.59
SHISA5-216ENST00000494854 LRRC24Q50LG9 513 aa18.73■□□□□ 0.59
SHISA5-216ENST00000494854 CC2D2BQ6DHV5 1058 aa18.73■□□□□ 0.59
SHISA5-216ENST00000494854 RBM17Q96I25 401 aaKnown RBP18.73■□□□□ 0.59
SHISA5-216ENST00000494854 A0A0D9SFI3 127 aa18.72■□□□□ 0.59
SHISA5-216ENST00000494854 CCDC57Q2TAC2 916 aa18.72■□□□□ 0.59
SHISA5-216ENST00000494854 RTKN2Q8IZC4 609 aa18.72■□□□□ 0.59
SHISA5-216ENST00000494854 EDC3Q96F86 508 aaKnown RBP18.72■□□□□ 0.59
SHISA5-216ENST00000494854 ZNF609O15014 1411 aa18.72■□□□□ 0.59
SHISA5-216ENST00000494854 RFX7Q2KHR2 1363 aa18.72■□□□□ 0.59
SHISA5-216ENST00000494854 CDHR2Q9BYE9 1310 aa18.72■□□□□ 0.59
SHISA5-216ENST00000494854 CYP2E1P05181 493 aaPredicted RBP18.72■□□□□ 0.59
SHISA5-216ENST00000494854 CLEC17AQ6ZS10 378 aa18.72■□□□□ 0.59
SHISA5-216ENST00000494854 C3orf67Q6ZVT6 689 aa18.72■□□□□ 0.59
SHISA5-216ENST00000494854 HAUS7Q99871 368 aa18.72■□□□□ 0.59
SHISA5-216ENST00000494854 MED23Q9ULK4 1368 aa18.71■□□□□ 0.59
SHISA5-216ENST00000494854 TRAK2O60296 914 aa18.71■□□□□ 0.59
SHISA5-216ENST00000494854 GRIPAP1Q4V328 841 aa18.71■□□□□ 0.59
SHISA5-216ENST00000494854 NOL8Q76FK4 1167 aaKnown RBP18.71■□□□□ 0.59
SHISA5-216ENST00000494854 KCNB2Q92953 911 aa18.71■□□□□ 0.59
SHISA5-216ENST00000494854 NEUROD6Q96NK8 337 aa18.71■□□□□ 0.59
SHISA5-216ENST00000494854 CSF1RP07333 972 aa18.7■□□□□ 0.58
SHISA5-216ENST00000494854 NECTIN1Q15223 517 aa18.7■□□□□ 0.58
SHISA5-216ENST00000494854 MAP4K1Q92918 833 aa18.7■□□□□ 0.58
SHISA5-216ENST00000494854 DNAJC2Q99543 621 aaKnown RBP18.7■□□□□ 0.58
SHISA5-216ENST00000494854 FBXO3Q9UK99 471 aa18.7■□□□□ 0.58
SHISA5-216ENST00000494854 TIMM10P62072 90 aa18.7■□□□□ 0.58
SHISA5-216ENST00000494854 FKBP4Q02790 459 aaKnown RBP eCLIP18.7■□□□□ 0.58
SHISA5-216ENST00000494854 SYNE4Q8N205 404 aa18.7■□□□□ 0.58
SHISA5-216ENST00000494854 INTS4Q96HW7 963 aaKnown RBP18.7■□□□□ 0.58
SHISA5-216ENST00000494854 TTC14Q96N46 770 aa18.7■□□□□ 0.58
SHISA5-216ENST00000494854 PUS3Q9BZE2 481 aaKnown RBP18.7■□□□□ 0.58
SHISA5-216ENST00000494854 RBM8AQ9Y5S9 174 aaKnown RBP18.7■□□□□ 0.58
SHISA5-216ENST00000494854 LAMB2P55268 1798 aa18.7■□□□□ 0.58
SHISA5-216ENST00000494854 TIAM2Q8IVF5 1701 aa18.7■□□□□ 0.58
SHISA5-216ENST00000494854 GLTPD2A6NH11 291 aa18.69■□□□□ 0.58
SHISA5-216ENST00000494854 HCLS1P14317 486 aaPredicted RBP18.69■□□□□ 0.58
SHISA5-216ENST00000494854 PTMSP20962 102 aa18.69■□□□□ 0.58
SHISA5-216ENST00000494854 PKP1Q13835 747 aa18.69■□□□□ 0.58
SHISA5-216ENST00000494854 SNED1Q8TER0 1413 aa18.69■□□□□ 0.58
SHISA5-216ENST00000494854 NMRK2Q9NPI5 230 aa18.69■□□□□ 0.58
SHISA5-216ENST00000494854 NDUFB9Q9Y6M9 179 aa18.69■□□□□ 0.58
SHISA5-216ENST00000494854 SPEF2Q9C093 1822 aa18.69■□□□□ 0.58
SHISA5-216ENST00000494854 A0A1B0GUL7 405 aa18.68■□□□□ 0.58
SHISA5-216ENST00000494854 BAG4O95429 457 aaKnown RBP18.68■□□□□ 0.58
SHISA5-216ENST00000494854 CASTP20810 708 aaKnown RBP18.68■□□□□ 0.58
SHISA5-216ENST00000494854 KCNJ4P48050 445 aa18.68■□□□□ 0.58
SHISA5-216ENST00000494854 IFIT5Q13325 482 aaKnown RBP18.68■□□□□ 0.58
SHISA5-216ENST00000494854 OLFM4Q6UX06 510 aa18.68■□□□□ 0.58
SHISA5-216ENST00000494854 CCDC85AQ96PX6 553 aaPredicted RBP18.68■□□□□ 0.58
SHISA5-216ENST00000494854 PSMD1Q99460 953 aa18.68■□□□□ 0.58
SHISA5-216ENST00000494854 TM6SF1Q9BZW5 370 aa18.68■□□□□ 0.58
SHISA5-216ENST00000494854 CEP126Q9P2H0 1117 aa18.68■□□□□ 0.58
SHISA5-216ENST00000494854 BBOX1O75936 387 aa18.67■□□□□ 0.58
SHISA5-216ENST00000494854 ZKSCAN1P17029 563 aaPredicted RBP18.67■□□□□ 0.58
SHISA5-216ENST00000494854 TAF7LQ5H9L4 462 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms