RNA–Protein interactions for RNA: ENST00000494559.5

PDZRN3-211, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-211ENST00000494559 PANK2Q9BZ23 570 aa18.45■□□□□ 0.54
PDZRN3-211ENST00000494559 UBAP1LF5GYI3 381 aa18.45■□□□□ 0.54
PDZRN3-211ENST00000494559 F13A1P00488 732 aa18.45■□□□□ 0.54
PDZRN3-211ENST00000494559 PI16Q6UXB8 463 aa18.45■□□□□ 0.54
PDZRN3-211ENST00000494559 NSFL1CQ9UNZ2 370 aaKnown RBP18.45■□□□□ 0.54
PDZRN3-211ENST00000494559 MTMR6Q9Y217 621 aa18.45■□□□□ 0.54
PDZRN3-211ENST00000494559 NTSR2O95665 410 aa18.44■□□□□ 0.54
PDZRN3-211ENST00000494559 ZSCAN23Q3MJ62 389 aa18.44■□□□□ 0.54
PDZRN3-211ENST00000494559 C8orf37Q96NL8 207 aa18.44■□□□□ 0.54
PDZRN3-211ENST00000494559 MROH5Q6ZUA9 1318 aa18.44■□□□□ 0.54
PDZRN3-211ENST00000494559 DTNBO60941 627 aa18.43■□□□□ 0.54
PDZRN3-211ENST00000494559 MBD3O95983 291 aa18.43■□□□□ 0.54
PDZRN3-211ENST00000494559 FGFR2P21802 821 aa18.43■□□□□ 0.54
PDZRN3-211ENST00000494559 TMEM87AQ8NBN3 555 aa18.43■□□□□ 0.54
PDZRN3-211ENST00000494559 NGLY1Q96IV0 654 aa18.43■□□□□ 0.54
PDZRN3-211ENST00000494559 FOXP2O15409 715 aa18.43■□□□□ 0.54
PDZRN3-211ENST00000494559 FOXD4L6Q3SYB3 417 aaPredicted RBP18.43■□□□□ 0.54
PDZRN3-211ENST00000494559 FOXD4L3Q6VB84 417 aaPredicted RBP18.43■□□□□ 0.54
PDZRN3-211ENST00000494559 A0A0G2JLW4 131 aa18.42■□□□□ 0.54
PDZRN3-211ENST00000494559 FAM177BA6PVY3 158 aa18.42■□□□□ 0.54
PDZRN3-211ENST00000494559 HMGB1P09429 215 aaKnown RBP18.42■□□□□ 0.54
PDZRN3-211ENST00000494559 Q6ZUG5 572 aa18.42■□□□□ 0.54
PDZRN3-211ENST00000494559 FNBP4Q8N3X1 1017 aaPredicted RBP18.42■□□□□ 0.54
PDZRN3-211ENST00000494559 APPBP2Q92624 585 aa18.42■□□□□ 0.54
PDZRN3-211ENST00000494559 RBM27Q9P2N5 1060 aaKnown RBP18.42■□□□□ 0.54
PDZRN3-211ENST00000494559 NIP7Q9Y221 180 aaKnown RBP eCLIP18.42■□□□□ 0.54
PDZRN3-211ENST00000494559 RTL9Q8NET4 1388 aa18.42■□□□□ 0.54
PDZRN3-211ENST00000494559 MYO5AQ9Y4I1 1855 aaKnown RBP18.42■□□□□ 0.54
PDZRN3-211ENST00000494559 ARID4AP29374 1257 aaPredicted RBP18.42■□□□□ 0.54
PDZRN3-211ENST00000494559 USP48Q86UV5 1035 aa18.42■□□□□ 0.54
PDZRN3-211ENST00000494559 LINC00116Q8NCU8 138 aa18.42■□□□□ 0.54
PDZRN3-211ENST00000494559 TMEM63CQ9P1W3 806 aa18.42■□□□□ 0.54
PDZRN3-211ENST00000494559 EXOSC10Q01780 885 aaKnown RBP18.41■□□□□ 0.54
PDZRN3-211ENST00000494559 PUM3Q15397 648 aaKnown RBP18.41■□□□□ 0.54
PDZRN3-211ENST00000494559 CCDC102BQ68D86 513 aa18.41■□□□□ 0.54
PDZRN3-211ENST00000494559 DHX32Q7L7V1 743 aaKnown RBP18.41■□□□□ 0.54
PDZRN3-211ENST00000494559 LPIN2Q92539 896 aa18.41■□□□□ 0.54
PDZRN3-211ENST00000494559 GDPD2Q9HCC8 539 aa18.41■□□□□ 0.54
PDZRN3-211ENST00000494559 PDIA4P13667 645 aaKnown RBP18.4■□□□□ 0.54
PDZRN3-211ENST00000494559 PHKA1P46020 1223 aa18.4■□□□□ 0.54
PDZRN3-211ENST00000494559 WASHC4Q2M389 1173 aa18.4■□□□□ 0.54
PDZRN3-211ENST00000494559 GTF3C6Q969F1 213 aa18.4■□□□□ 0.54
PDZRN3-211ENST00000494559 PUS7LQ9H0K6 701 aaKnown RBP18.4■□□□□ 0.54
PDZRN3-211ENST00000494559 SEC31BQ9NQW1 1179 aa18.4■□□□□ 0.54
PDZRN3-211ENST00000494559 ATP6V1DQ9Y5K8 247 aa18.4■□□□□ 0.54
PDZRN3-211ENST00000494559 E7EWF7 191 aa18.4■□□□□ 0.54
PDZRN3-211ENST00000494559 CLEC4GQ6UXB4 293 aa18.4■□□□□ 0.54
PDZRN3-211ENST00000494559 HELBQ8NG08 1087 aaPredicted RBP18.4■□□□□ 0.54
PDZRN3-211ENST00000494559 AGXT2Q9BYV1 514 aa18.4■□□□□ 0.54
PDZRN3-211ENST00000494559 CNPY2Q9Y2B0 182 aa18.4■□□□□ 0.54
PDZRN3-211ENST00000494559 GADD45BO75293 160 aaPredicted RBP18.39■□□□□ 0.53
PDZRN3-211ENST00000494559 UQCRFS1P1P0C7P4 283 aa18.39■□□□□ 0.53
PDZRN3-211ENST00000494559 HSP90B1P14625 803 aaKnown RBP18.39■□□□□ 0.53
PDZRN3-211ENST00000494559 STK3Q13188 491 aa18.39■□□□□ 0.53
PDZRN3-211ENST00000494559 TTF1Q15361 905 aaPredicted RBP18.39■□□□□ 0.53
PDZRN3-211ENST00000494559 CCDC152Q4G0S7 254 aa18.39■□□□□ 0.53
PDZRN3-211ENST00000494559 TTLL5Q6EMB2 1281 aa18.39■□□□□ 0.53
PDZRN3-211ENST00000494559 ZNF652Q9Y2D9 606 aa18.39■□□□□ 0.53
PDZRN3-211ENST00000494559 ADD2P35612 726 aa18.38■□□□□ 0.53
PDZRN3-211ENST00000494559 LARP1BQ659C4 914 aaKnown RBP18.38■□□□□ 0.53
PDZRN3-211ENST00000494559 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.38■□□□□ 0.53
PDZRN3-211ENST00000494559 PIH1D3Q9NQM4 214 aaKnown RBP18.38■□□□□ 0.53
PDZRN3-211ENST00000494559 THSD7AQ9UPZ6 1657 aa18.38■□□□□ 0.53
PDZRN3-211ENST00000494559 ATRNO75882 1429 aa18.38■□□□□ 0.53
PDZRN3-211ENST00000494559 PDCP20941 246 aa18.38■□□□□ 0.53
PDZRN3-211ENST00000494559 PTF1AQ7RTS3 328 aa18.38■□□□□ 0.53
PDZRN3-211ENST00000494559 BRF1Q92994 677 aa18.38■□□□□ 0.53
PDZRN3-211ENST00000494559 MPHOSPH8Q99549 860 aa18.38■□□□□ 0.53
PDZRN3-211ENST00000494559 LRRC2Q9BYS8 371 aa18.38■□□□□ 0.53
PDZRN3-211ENST00000494559 CTNNA3Q9UI47 895 aa18.38■□□□□ 0.53
PDZRN3-211ENST00000494559 CNTNAP4Q9C0A0 1308 aa18.38■□□□□ 0.53
PDZRN3-211ENST00000494559 ZSCAN25Q6NSZ9 544 aa18.37■□□□□ 0.53
PDZRN3-211ENST00000494559 VPS37CA5D8V6 355 aaPredicted RBP18.37■□□□□ 0.53
PDZRN3-211ENST00000494559 GPAA1O43292 621 aa18.37■□□□□ 0.53
PDZRN3-211ENST00000494559 FGAP02671 866 aa18.37■□□□□ 0.53
PDZRN3-211ENST00000494559 SLC5A1P13866 664 aa18.37■□□□□ 0.53
PDZRN3-211ENST00000494559 BTAF1O14981 1849 aa18.36■□□□□ 0.53
PDZRN3-211ENST00000494559 COL4A1P02462 1669 aa18.36■□□□□ 0.53
PDZRN3-211ENST00000494559 SCN7AQ01118 1682 aa18.36■□□□□ 0.53
PDZRN3-211ENST00000494559 CASZ1Q86V15 1759 aa18.36■□□□□ 0.53
PDZRN3-211ENST00000494559 DOCK2Q92608 1830 aa18.36■□□□□ 0.53
PDZRN3-211ENST00000494559 PFKFB2O60825 505 aa18.36■□□□□ 0.53
PDZRN3-211ENST00000494559 KCNQ4P56696 695 aa18.36■□□□□ 0.53
PDZRN3-211ENST00000494559 UBE3CQ15386 1083 aa18.36■□□□□ 0.53
PDZRN3-211ENST00000494559 RGL2O15211 777 aa18.35■□□□□ 0.53
PDZRN3-211ENST00000494559 SLC9C2Q5TAH2 1124 aa18.35■□□□□ 0.53
PDZRN3-211ENST00000494559 CDC37L1Q7L3B6 337 aa18.35■□□□□ 0.53
PDZRN3-211ENST00000494559 FBXL16Q8N461 479 aa18.35■□□□□ 0.53
PDZRN3-211ENST00000494559 NHSQ6T4R5 1651 aa18.35■□□□□ 0.53
PDZRN3-211ENST00000494559 SNAP23O00161 211 aa18.35■□□□□ 0.53
PDZRN3-211ENST00000494559 IGHMBP2P38935 993 aaKnown RBP18.35■□□□□ 0.53
PDZRN3-211ENST00000494559 DNM1Q05193 864 aaKnown RBP18.35■□□□□ 0.53
PDZRN3-211ENST00000494559 SCRN1Q12765 414 aa18.35■□□□□ 0.53
PDZRN3-211ENST00000494559 JAK2O60674 1132 aa18.34■□□□□ 0.53
PDZRN3-211ENST00000494559 IMMTQ16891 758 aaKnown RBP18.34■□□□□ 0.53
PDZRN3-211ENST00000494559 RC3H1Q5TC82 1133 aaKnown RBP18.34■□□□□ 0.53
PDZRN3-211ENST00000494559 USP21Q9UK80 565 aa18.34■□□□□ 0.53
PDZRN3-211ENST00000494559 SPATA31A6Q5VVP1 1343 aa18.34■□□□□ 0.53
PDZRN3-211ENST00000494559 TCRBV5S4A2TA0A5A2 114 aa18.34■□□□□ 0.53
PDZRN3-211ENST00000494559 FGD1P98174 961 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms