RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 NF2P35240 595 aa12.33□□□□□ -0.44
UBR4-216ENST00000494503 ZNF280AP59817 542 aaPredicted RBP12.33□□□□□ -0.44
UBR4-216ENST00000494503 TWISTNBQ3B726 338 aaPredicted RBP12.33□□□□□ -0.44
UBR4-216ENST00000494503 MOB2Q70IA6 237 aa12.33□□□□□ -0.44
UBR4-216ENST00000494503 MPHOSPH8Q99549 860 aa12.33□□□□□ -0.44
UBR4-216ENST00000494503 SAGE1Q9NXZ1 904 aa12.33□□□□□ -0.44
UBR4-216ENST00000494503 CHMP3Q9Y3E7 222 aa12.33□□□□□ -0.44
UBR4-216ENST00000494503 SALL2Q9Y467 1007 aaPredicted RBP12.33□□□□□ -0.44
UBR4-216ENST00000494503 PDE4DIPQ5VU43 2346 aa12.33□□□□□ -0.44
UBR4-216ENST00000494503 MED23Q9ULK4 1368 aa12.32□□□□□ -0.44
UBR4-216ENST00000494503 WTIPA6NIX2 430 aaPredicted RBP12.32□□□□□ -0.44
UBR4-216ENST00000494503 UBE2Q2LH0YL09 131 aa12.32□□□□□ -0.44
UBR4-216ENST00000494503 SASH1O94885 1247 aa12.32□□□□□ -0.44
UBR4-216ENST00000494503 SLC4A2P04920 1241 aa12.32□□□□□ -0.44
UBR4-216ENST00000494503 IGKV5-2P06315 115 aa12.32□□□□□ -0.44
UBR4-216ENST00000494503 CCT4P50991 539 aaKnown RBP12.32□□□□□ -0.44
UBR4-216ENST00000494503 SOX10P56693 466 aa12.32□□□□□ -0.44
UBR4-216ENST00000494503 FKBP5Q13451 457 aaPredicted RBP12.32□□□□□ -0.44
UBR4-216ENST00000494503 PRKG1Q13976 671 aa12.32□□□□□ -0.44
UBR4-216ENST00000494503 NBPF9Q3BBW0 867 aa12.32□□□□□ -0.44
UBR4-216ENST00000494503 RASAL3Q86YV0 1011 aa12.32□□□□□ -0.44
UBR4-216ENST00000494503 TTLL11Q8NHH1 800 aa12.32□□□□□ -0.44
UBR4-216ENST00000494503 BSDC1Q9NW68 430 aaPredicted RBP12.32□□□□□ -0.44
UBR4-216ENST00000494503 HDAC9Q9UKV0 1011 aa12.32□□□□□ -0.44
UBR4-216ENST00000494503 MINPP1Q9UNW1 487 aa12.32□□□□□ -0.44
UBR4-216ENST00000494503 NEURL1BA8MQ27 555 aa12.31□□□□□ -0.44
UBR4-216ENST00000494503 FKBP1BP68106 108 aa12.31□□□□□ -0.44
UBR4-216ENST00000494503 G2E3Q7L622 706 aa12.31□□□□□ -0.44
UBR4-216ENST00000494503 KIAA0825Q8IV33 1275 aa12.31□□□□□ -0.44
UBR4-216ENST00000494503 CSRNP1Q96S65 589 aa12.31□□□□□ -0.44
UBR4-216ENST00000494503 MYH16Q9H6N6 1097 aa12.31□□□□□ -0.44
UBR4-216ENST00000494503 PITPNM2Q9BZ72 1349 aa12.31□□□□□ -0.44
UBR4-216ENST00000494503 ITGA6P23229 1130 aa12.3□□□□□ -0.44
UBR4-216ENST00000494503 COA1Q9GZY4 146 aa12.3□□□□□ -0.44
UBR4-216ENST00000494503 ZNF804BA4D1E1 1349 aa12.3□□□□□ -0.44
UBR4-216ENST00000494503 MYO3BQ8WXR4 1341 aa12.3□□□□□ -0.44
UBR4-216ENST00000494503 ZNF609O15014 1411 aa12.29□□□□□ -0.44
UBR4-216ENST00000494503 TBC1D8O95759 1140 aa12.29□□□□□ -0.44
UBR4-216ENST00000494503 KLRK1P26718 216 aa12.29□□□□□ -0.44
UBR4-216ENST00000494503 GTF2IP78347 998 aa12.29□□□□□ -0.44
UBR4-216ENST00000494503 FLIIQ13045 1269 aa12.29□□□□□ -0.44
UBR4-216ENST00000494503 DACT2Q5SW24 774 aa12.29□□□□□ -0.44
UBR4-216ENST00000494503 TTLL5Q6EMB2 1281 aa12.29□□□□□ -0.44
UBR4-216ENST00000494503 CTU1Q7Z7A3 348 aaKnown RBP12.29□□□□□ -0.44
UBR4-216ENST00000494503 REM2Q8IYK8 340 aaPredicted RBP12.29□□□□□ -0.44
UBR4-216ENST00000494503 GMLQ99445 158 aa12.29□□□□□ -0.44
UBR4-216ENST00000494503 ANKRD2Q9GZV1 360 aa12.29□□□□□ -0.44
UBR4-216ENST00000494503 F8W031 263 aaPredicted RBP12.28□□□□□ -0.44
UBR4-216ENST00000494503 WNT10BO00744 389 aa12.28□□□□□ -0.44
UBR4-216ENST00000494503 RGS19P49795 217 aa12.28□□□□□ -0.44
UBR4-216ENST00000494503 GCKRQ14397 625 aa12.28□□□□□ -0.44
UBR4-216ENST00000494503 TAF7LQ5H9L4 462 aa12.28□□□□□ -0.44
UBR4-216ENST00000494503 STRIP1Q5VSL9 837 aa12.28□□□□□ -0.44
UBR4-216ENST00000494503 TXNRD3Q86VQ6 643 aa12.28□□□□□ -0.44
UBR4-216ENST00000494503 WWC1Q8IX03 1113 aa12.28□□□□□ -0.44
UBR4-216ENST00000494503 LEMD3Q9Y2U8 911 aa12.28□□□□□ -0.44
UBR4-216ENST00000494503 CACNA1FO60840 1977 aa12.28□□□□□ -0.44
UBR4-216ENST00000494503 ANKRD18BA2A2Z9 1011 aa12.27□□□□□ -0.45
UBR4-216ENST00000494503 H7C1W4 665 aa12.27□□□□□ -0.45
UBR4-216ENST00000494503 PLIN1O60240 522 aa12.27□□□□□ -0.45
UBR4-216ENST00000494503 CHRNDQ07001 517 aa12.27□□□□□ -0.45
UBR4-216ENST00000494503 CCDC184Q52MB2 194 aa12.27□□□□□ -0.45
UBR4-216ENST00000494503 ARMC9Q7Z3E5 817 aa12.27□□□□□ -0.45
UBR4-216ENST00000494503 APOBEC3FQ8IUX4 373 aaKnown RBP12.27□□□□□ -0.45
UBR4-216ENST00000494503 HELBQ8NG08 1087 aaPredicted RBP12.27□□□□□ -0.45
UBR4-216ENST00000494503 DNAAF4Q8WXU2 420 aa12.27□□□□□ -0.45
UBR4-216ENST00000494503 ANGEL1Q9UNK9 670 aaKnown RBP12.27□□□□□ -0.45
UBR4-216ENST00000494503 ZNF646O15015 1829 aaPredicted RBP12.26□□□□□ -0.45
UBR4-216ENST00000494503 TAF5LO75529 589 aa12.26□□□□□ -0.45
UBR4-216ENST00000494503 RBM5P52756 815 aaKnown RBP eCLIP12.26□□□□□ -0.45
UBR4-216ENST00000494503 SREBF2Q12772 1141 aa12.26□□□□□ -0.45
UBR4-216ENST00000494503 IFIT5Q13325 482 aaKnown RBP12.26□□□□□ -0.45
UBR4-216ENST00000494503 DLGAP5Q15398 846 aa12.26□□□□□ -0.45
UBR4-216ENST00000494503 MRS2Q9HD23 443 aa12.26□□□□□ -0.45
UBR4-216ENST00000494503 JAG2Q9Y219 1238 aa12.26□□□□□ -0.45
UBR4-216ENST00000494503 FANCIQ9NVI1 1328 aa12.26□□□□□ -0.45
UBR4-216ENST00000494503 MYO1BO43795 1136 aa12.25□□□□□ -0.45
UBR4-216ENST00000494503 LINS1Q8NG48 757 aa12.25□□□□□ -0.45
UBR4-216ENST00000494503 ZNF296Q8WUU4 475 aaPredicted RBP12.25□□□□□ -0.45
UBR4-216ENST00000494503 VEZTQ9HBM0 779 aa12.25□□□□□ -0.45
UBR4-216ENST00000494503 FZD1Q9UP38 647 aa12.25□□□□□ -0.45
UBR4-216ENST00000494503 CLRN2A0PK11 232 aa12.24□□□□□ -0.45
UBR4-216ENST00000494503 F6X3S4 739 aa12.24□□□□□ -0.45
UBR4-216ENST00000494503 SNAP23O00161 211 aa12.24□□□□□ -0.45
UBR4-216ENST00000494503 PTPN12Q05209 780 aaKnown RBP12.24□□□□□ -0.45
UBR4-216ENST00000494503 CCDC27Q2M243 656 aa12.24□□□□□ -0.45
UBR4-216ENST00000494503 ECM29Q5VYK3 1845 aa12.24□□□□□ -0.45
UBR4-216ENST00000494503 ZNF804AQ7Z570 1209 aa12.24□□□□□ -0.45
UBR4-216ENST00000494503 CD209Q9NNX6 404 aa12.24□□□□□ -0.45
UBR4-216ENST00000494503 HPS5Q9UPZ3 1129 aa12.24□□□□□ -0.45
UBR4-216ENST00000494503 A0A1B0GUL6 1792 aa12.23□□□□□ -0.45
UBR4-216ENST00000494503 EXOSC9Q06265 439 aaKnown RBP12.23□□□□□ -0.45
UBR4-216ENST00000494503 CCDC57Q2TAC2 916 aa12.23□□□□□ -0.45
UBR4-216ENST00000494503 SLC4A10Q6U841 1118 aa12.23□□□□□ -0.45
UBR4-216ENST00000494503 PLA2G12BQ9BX93 195 aa12.23□□□□□ -0.45
UBR4-216ENST00000494503 CNNM1Q9NRU3 951 aa12.23□□□□□ -0.45
UBR4-216ENST00000494503 IL16Q14005 1332 aa12.22□□□□□ -0.45
UBR4-216ENST00000494503 GPR25O00155 361 aa12.22□□□□□ -0.45
UBR4-216ENST00000494503 PPP1R12BO60237 982 aaPredicted RBP12.22□□□□□ -0.45
UBR4-216ENST00000494503 SLC34A2O95436 690 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms