RNA–Protein interactions for RNA: ENST00000494377.7

PAX6-218, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 1,911 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-218ENST00000494377 TNNQ9UQP3 1299 aa13.15□□□□□ -0.3
PAX6-218ENST00000494377 MED23Q9ULK4 1368 aa13.14□□□□□ -0.31
PAX6-218ENST00000494377 SHTN1A0MZ66 631 aa13.14□□□□□ -0.31
PAX6-218ENST00000494377 IPO8O15397 1037 aaKnown RBP13.14□□□□□ -0.31
PAX6-218ENST00000494377 TRIM27P14373 513 aa13.14□□□□□ -0.31
PAX6-218ENST00000494377 KLRK1P26718 216 aa13.14□□□□□ -0.31
PAX6-218ENST00000494377 PUS3Q9BZE2 481 aaKnown RBP13.14□□□□□ -0.31
PAX6-218ENST00000494377 ADARB2Q9NS39 739 aaKnown RBP13.14□□□□□ -0.31
PAX6-218ENST00000494377 CNOT7Q9UIV1 285 aaKnown RBP13.14□□□□□ -0.31
PAX6-218ENST00000494377 SCN9AQ15858 1988 aa13.14□□□□□ -0.31
PAX6-218ENST00000494377 VIL1P09327 827 aaKnown RBP13.13□□□□□ -0.31
PAX6-218ENST00000494377 INTS3Q68E01 1043 aaKnown RBP13.13□□□□□ -0.31
PAX6-218ENST00000494377 ATF7IPQ6VMQ6 1270 aa13.13□□□□□ -0.31
PAX6-218ENST00000494377 USP50Q70EL3 339 aaPredicted RBP13.13□□□□□ -0.31
PAX6-218ENST00000494377 PODNQ7Z5L7 613 aa13.13□□□□□ -0.31
PAX6-218ENST00000494377 PLIN1O60240 522 aa13.13□□□□□ -0.31
PAX6-218ENST00000494377 NEFLP07196 543 aa13.13□□□□□ -0.31
PAX6-218ENST00000494377 UBTFL1P0CB47 393 aaPredicted RBP13.13□□□□□ -0.31
PAX6-218ENST00000494377 KCNJ4P48050 445 aa13.13□□□□□ -0.31
PAX6-218ENST00000494377 MAP1SQ66K74 1059 aaPredicted RBP13.13□□□□□ -0.31
PAX6-218ENST00000494377 DPF2Q92785 391 aa13.13□□□□□ -0.31
PAX6-218ENST00000494377 ITGBL1O95965 494 aaPredicted RBP13.12□□□□□ -0.31
PAX6-218ENST00000494377 MICALL2Q8IY33 904 aa13.12□□□□□ -0.31
PAX6-218ENST00000494377 CNTROBQ8N137 903 aa13.12□□□□□ -0.31
PAX6-218ENST00000494377 CLUAP1Q96AJ1 413 aa13.12□□□□□ -0.31
PAX6-218ENST00000494377 MEIS3Q99687 375 aa13.12□□□□□ -0.31
PAX6-218ENST00000494377 RIPOR2Q9Y4F9 1068 aa13.12□□□□□ -0.31
PAX6-218ENST00000494377 ADAMTSL1Q8N6G6 1762 aa13.12□□□□□ -0.31
PAX6-218ENST00000494377 H7C1D1 291 aa13.11□□□□□ -0.31
PAX6-218ENST00000494377 HIRAP54198 1017 aaPredicted RBP13.11□□□□□ -0.31
PAX6-218ENST00000494377 LRRC24Q50LG9 513 aa13.11□□□□□ -0.31
PAX6-218ENST00000494377 KLHDC4Q8TBB5 520 aa13.11□□□□□ -0.31
PAX6-218ENST00000494377 COA1Q9GZY4 146 aa13.11□□□□□ -0.31
PAX6-218ENST00000494377 IRS2Q9Y4H2 1338 aa13.11□□□□□ -0.31
PAX6-218ENST00000494377 USP17L3A6NCW0 530 aa13.11□□□□□ -0.31
PAX6-218ENST00000494377 USP17L4A6NCW7 530 aa13.11□□□□□ -0.31
PAX6-218ENST00000494377 RPS12P25398 132 aaKnown RBP13.11□□□□□ -0.31
PAX6-218ENST00000494377 RSBN1LQ6PCB5 846 aaPredicted RBP13.11□□□□□ -0.31
PAX6-218ENST00000494377 USP17L1Q7RTZ2 530 aa13.11□□□□□ -0.31
PAX6-218ENST00000494377 DNAJC5GQ8N7S2 189 aa13.11□□□□□ -0.31
PAX6-218ENST00000494377 TRPM4Q8TD43 1214 aa13.11□□□□□ -0.31
PAX6-218ENST00000494377 PASKQ96RG2 1323 aa13.1□□□□□ -0.31
PAX6-218ENST00000494377 ZKSCAN2Q63HK3 967 aa13.1□□□□□ -0.31
PAX6-218ENST00000494377 SAMD7Q7Z3H4 446 aa13.1□□□□□ -0.31
PAX6-218ENST00000494377 LRRFIP2Q9Y608 721 aaKnown RBP13.1□□□□□ -0.31
PAX6-218ENST00000494377 EGFRP00533 1210 aa13.09□□□□□ -0.31
PAX6-218ENST00000494377 RFX5P48382 616 aaPredicted RBP13.09□□□□□ -0.31
PAX6-218ENST00000494377 C15orf52Q6ZUT6 534 aaKnown RBP13.09□□□□□ -0.31
PAX6-218ENST00000494377 CD209Q9NNX6 404 aa13.09□□□□□ -0.31
PAX6-218ENST00000494377 PTPN12Q05209 780 aaKnown RBP13.09□□□□□ -0.31
PAX6-218ENST00000494377 TBC1D10BQ4KMP7 808 aaPredicted RBP13.09□□□□□ -0.31
PAX6-218ENST00000494377 AGBL3Q8NEM8 1001 aa13.09□□□□□ -0.31
PAX6-218ENST00000494377 GMLQ99445 158 aa13.09□□□□□ -0.31
PAX6-218ENST00000494377 MXD3Q9BW11 206 aa13.09□□□□□ -0.31
PAX6-218ENST00000494377 MROH5Q6ZUA9 1318 aa13.08□□□□□ -0.31
PAX6-218ENST00000494377 ABCB7O75027 752 aa13.08□□□□□ -0.32
PAX6-218ENST00000494377 GNAI3P08754 354 aa13.08□□□□□ -0.32
PAX6-218ENST00000494377 UBE4AQ14139 1066 aa13.08□□□□□ -0.32
PAX6-218ENST00000494377 DACT2Q5SW24 774 aa13.08□□□□□ -0.32
PAX6-218ENST00000494377 RBM26Q5T8P6 1007 aaKnown RBP13.08□□□□□ -0.32
PAX6-218ENST00000494377 STRIP1Q5VSL9 837 aa13.08□□□□□ -0.32
PAX6-218ENST00000494377 TTLL5Q6EMB2 1281 aa13.08□□□□□ -0.32
PAX6-218ENST00000494377 TMEM57Q8N5G2 664 aa13.08□□□□□ -0.32
PAX6-218ENST00000494377 FBXW7Q969H0 707 aa13.08□□□□□ -0.32
PAX6-218ENST00000494377 PGAP2Q9UHJ9 254 aa13.08□□□□□ -0.32
PAX6-218ENST00000494377 HDAC5Q9UQL6 1122 aa13.08□□□□□ -0.32
PAX6-218ENST00000494377 A0A1B0GUL6 1792 aa13.08□□□□□ -0.32
PAX6-218ENST00000494377 FMR1Q06787 632 aaKnown RBP eCLIP13.07□□□□□ -0.32
PAX6-218ENST00000494377 METTL24Q5JXM2 366 aa13.07□□□□□ -0.32
PAX6-218ENST00000494377 ZC3H15Q8WU90 426 aaKnown RBP13.07□□□□□ -0.32
PAX6-218ENST00000494377 PDE8BO95263 885 aa13.07□□□□□ -0.32
PAX6-218ENST00000494377 GTF2IP78347 998 aa13.07□□□□□ -0.32
PAX6-218ENST00000494377 VGLL2Q8N8G2 317 aa13.07□□□□□ -0.32
PAX6-218ENST00000494377 PSME4Q14997 1843 aa13.07□□□□□ -0.32
PAX6-218ENST00000494377 ZNF609O15014 1411 aa13.07□□□□□ -0.32
PAX6-218ENST00000494377 EYA2O00167 538 aa13.06□□□□□ -0.32
PAX6-218ENST00000494377 TRAF5O00463 557 aa13.06□□□□□ -0.32
PAX6-218ENST00000494377 NPM3O75607 178 aaKnown RBP13.06□□□□□ -0.32
PAX6-218ENST00000494377 USP17L8P0C7I0 530 aa13.06□□□□□ -0.32
PAX6-218ENST00000494377 IL1R1P14778 569 aa13.06□□□□□ -0.32
PAX6-218ENST00000494377 ZNF280AP59817 542 aaPredicted RBP13.06□□□□□ -0.32
PAX6-218ENST00000494377 ZNF804AQ7Z570 1209 aa13.06□□□□□ -0.32
PAX6-218ENST00000494377 CREBZFQ9NS37 354 aa13.06□□□□□ -0.32
PAX6-218ENST00000494377 RLBP1P12271 317 aa13.05□□□□□ -0.32
PAX6-218ENST00000494377 GYG1P46976 350 aa13.05□□□□□ -0.32
PAX6-218ENST00000494377 KIF4BQ2VIQ3 1234 aa13.05□□□□□ -0.32
PAX6-218ENST00000494377 ATG9AQ7Z3C6 839 aa13.05□□□□□ -0.32
PAX6-218ENST00000494377 FTSJ3Q8IY81 847 aaKnown RBP13.05□□□□□ -0.32
PAX6-218ENST00000494377 DZIP1LQ8IYY4 767 aaKnown RBP13.05□□□□□ -0.32
PAX6-218ENST00000494377 KLRG1Q96E93 195 aa13.05□□□□□ -0.32
PAX6-218ENST00000494377 FAM84BQ96KN1 310 aaPredicted RBP13.05□□□□□ -0.32
PAX6-218ENST00000494377 GLIS2Q9BZE0 524 aaPredicted RBP13.05□□□□□ -0.32
PAX6-218ENST00000494377 SIL1Q9H173 461 aa13.05□□□□□ -0.32
PAX6-218ENST00000494377 PA2G4Q9UQ80 394 aaKnown RBP13.05□□□□□ -0.32
PAX6-218ENST00000494377 TMEM88BA6NKF7 163 aa13.05□□□□□ -0.32
PAX6-218ENST00000494377 MYOZ2Q9NPC6 264 aa13.05□□□□□ -0.32
PAX6-218ENST00000494377 GNAI2P04899 355 aa13.04□□□□□ -0.32
PAX6-218ENST00000494377 HIBADHP31937 336 aaKnown RBP13.04□□□□□ -0.32
PAX6-218ENST00000494377 JAG2Q9Y219 1238 aa13.04□□□□□ -0.32
PAX6-218ENST00000494377 MYO3BQ8WXR4 1341 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms