RNA–Protein interactions for RNA: ENST00000494327.1

HPS3-207, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 556 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-207ENST00000494327 TRPM4Q8TD43 1214 aa27.47■■□□□ 1.99
HPS3-207ENST00000494327 CLUAP1Q96AJ1 413 aa27.47■■□□□ 1.99
HPS3-207ENST00000494327 RSBN1LQ6PCB5 846 aaPredicted RBP27.46■■□□□ 1.99
HPS3-207ENST00000494327 SAMD7Q7Z3H4 446 aa27.46■■□□□ 1.99
HPS3-207ENST00000494327 KLHDC4Q8TBB5 520 aa27.46■■□□□ 1.99
HPS3-207ENST00000494327 HIRAP54198 1017 aaPredicted RBP27.45■■□□□ 1.98
HPS3-207ENST00000494327 INTS3Q68E01 1043 aaKnown RBP27.45■■□□□ 1.98
HPS3-207ENST00000494327 MEIS3Q99687 375 aa27.45■■□□□ 1.98
HPS3-207ENST00000494327 ADAMTSL1Q8N6G6 1762 aa27.45■■□□□ 1.98
HPS3-207ENST00000494327 PASKQ96RG2 1323 aa27.44■■□□□ 1.98
HPS3-207ENST00000494327 TBC1D10BQ4KMP7 808 aaPredicted RBP27.44■■□□□ 1.98
HPS3-207ENST00000494327 LRRC24Q50LG9 513 aa27.44■■□□□ 1.98
HPS3-207ENST00000494327 ZKSCAN2Q63HK3 967 aa27.44■■□□□ 1.98
HPS3-207ENST00000494327 DNAJC5GQ8N7S2 189 aa27.44■■□□□ 1.98
HPS3-207ENST00000494327 AGBL3Q8NEM8 1001 aa27.43■■□□□ 1.98
HPS3-207ENST00000494327 HDAC5Q9UQL6 1122 aa27.43■■□□□ 1.98
HPS3-207ENST00000494327 RIPOR2Q9Y4F9 1068 aa27.43■■□□□ 1.98
HPS3-207ENST00000494327 LRRFIP2Q9Y608 721 aaKnown RBP27.43■■□□□ 1.98
HPS3-207ENST00000494327 SCN9AQ15858 1988 aa27.42■■□□□ 1.98
HPS3-207ENST00000494327 MXD3Q9BW11 206 aa27.42■■□□□ 1.98
HPS3-207ENST00000494327 EGFRP00533 1210 aa27.41■■□□□ 1.98
HPS3-207ENST00000494327 METTL24Q5JXM2 366 aa27.41■■□□□ 1.98
HPS3-207ENST00000494327 CD209Q9NNX6 404 aa27.41■■□□□ 1.98
HPS3-207ENST00000494327 MROH5Q6ZUA9 1318 aa27.41■■□□□ 1.98
HPS3-207ENST00000494327 FMR1Q06787 632 aaKnown RBP eCLIP27.4■■□□□ 1.98
HPS3-207ENST00000494327 TTLL5Q6EMB2 1281 aa27.4■■□□□ 1.98
HPS3-207ENST00000494327 C15orf52Q6ZUT6 534 aaKnown RBP27.4■■□□□ 1.98
HPS3-207ENST00000494327 ZNF804AQ7Z570 1209 aa27.4■■□□□ 1.98
HPS3-207ENST00000494327 IRS2Q9Y4H2 1338 aa27.4■■□□□ 1.98
HPS3-207ENST00000494327 GNAI3P08754 354 aa27.39■■□□□ 1.98
HPS3-207ENST00000494327 GTF2IP78347 998 aa27.39■■□□□ 1.98
HPS3-207ENST00000494327 UBE4AQ14139 1066 aa27.39■■□□□ 1.98
HPS3-207ENST00000494327 DACT2Q5SW24 774 aa27.39■■□□□ 1.98
HPS3-207ENST00000494327 STRIP1Q5VSL9 837 aa27.39■■□□□ 1.98
HPS3-207ENST00000494327 ZC3H15Q8WU90 426 aaKnown RBP27.39■■□□□ 1.98
HPS3-207ENST00000494327 CREBZFQ9NS37 354 aa27.39■■□□□ 1.98
HPS3-207ENST00000494327 TMEM88BA6NKF7 163 aa27.38■■□□□ 1.97
HPS3-207ENST00000494327 TRAF5O00463 557 aa27.38■■□□□ 1.97
HPS3-207ENST00000494327 USP17L8P0C7I0 530 aa27.38■■□□□ 1.97
HPS3-207ENST00000494327 RFX5P48382 616 aaPredicted RBP27.38■■□□□ 1.97
HPS3-207ENST00000494327 KIF4BQ2VIQ3 1234 aa27.38■■□□□ 1.97
HPS3-207ENST00000494327 KLRG1Q96E93 195 aa27.38■■□□□ 1.97
HPS3-207ENST00000494327 GMLQ99445 158 aa27.38■■□□□ 1.97
HPS3-207ENST00000494327 CEP350Q5VT06 3117 aa27.38■■□□□ 1.97
HPS3-207ENST00000494327 TMEM57Q8N5G2 664 aa27.37■■□□□ 1.97
HPS3-207ENST00000494327 GLIS2Q9BZE0 524 aaPredicted RBP27.37■■□□□ 1.97
HPS3-207ENST00000494327 PGAP2Q9UHJ9 254 aa27.37■■□□□ 1.97
HPS3-207ENST00000494327 PTPN12Q05209 780 aaKnown RBP27.36■■□□□ 1.97
HPS3-207ENST00000494327 EYA2O00167 538 aa27.35■■□□□ 1.97
HPS3-207ENST00000494327 GYG1P46976 350 aa27.35■■□□□ 1.97
HPS3-207ENST00000494327 ZNF280AP59817 542 aaPredicted RBP27.35■■□□□ 1.97
HPS3-207ENST00000494327 SIL1Q9H173 461 aa27.35■■□□□ 1.97
HPS3-207ENST00000494327 PDE8BO95263 885 aa27.34■■□□□ 1.97
HPS3-207ENST00000494327 CDC37L1Q7L3B6 337 aa27.34■■□□□ 1.97
HPS3-207ENST00000494327 FTSJ3Q8IY81 847 aaKnown RBP27.34■■□□□ 1.97
HPS3-207ENST00000494327 MKRN1Q9UHC7 482 aaKnown RBP27.34■■□□□ 1.97
HPS3-207ENST00000494327 MYO3BQ8WXR4 1341 aa27.34■■□□□ 1.97
HPS3-207ENST00000494327 A0A1B0GUL6 1792 aa27.33■■□□□ 1.97
HPS3-207ENST00000494327 IL1R1P14778 569 aa27.33■■□□□ 1.97
HPS3-207ENST00000494327 HIBADHP31937 336 aaKnown RBP27.33■■□□□ 1.97
HPS3-207ENST00000494327 USP48Q86UV5 1035 aa27.33■■□□□ 1.97
HPS3-207ENST00000494327 OGFOD1Q8N543 542 aa27.33■■□□□ 1.97
HPS3-207ENST00000494327 DCPSQ96C86 337 aaKnown RBP27.33■■□□□ 1.97
HPS3-207ENST00000494327 MYOZ2Q9NPC6 264 aa27.33■■□□□ 1.97
HPS3-207ENST00000494327 JAG2Q9Y219 1238 aa27.33■■□□□ 1.97
HPS3-207ENST00000494327 ZNF609O15014 1411 aa27.33■■□□□ 1.96
HPS3-207ENST00000494327 DZIP1LQ8IYY4 767 aaKnown RBP27.32■■□□□ 1.96
HPS3-207ENST00000494327 VGLL2Q8N8G2 317 aa27.32■■□□□ 1.96
HPS3-207ENST00000494327 FAM84BQ96KN1 310 aaPredicted RBP27.32■■□□□ 1.96
HPS3-207ENST00000494327 PA2G4Q9UQ80 394 aaKnown RBP27.32■■□□□ 1.96
HPS3-207ENST00000494327 SCARF1Q14162 830 aa27.31■■□□□ 1.96
HPS3-207ENST00000494327 VPS37DQ86XT2 251 aa27.31■■□□□ 1.96
HPS3-207ENST00000494327 KIAA0825Q8IV33 1275 aa27.31■■□□□ 1.96
HPS3-207ENST00000494327 ABT1Q9ULW3 272 aaKnown RBP27.31■■□□□ 1.96
HPS3-207ENST00000494327 ASTN2O75129 1339 aaPredicted RBP27.31■■□□□ 1.96
HPS3-207ENST00000494327 PSME4Q14997 1843 aa27.3■■□□□ 1.96
HPS3-207ENST00000494327 GNAI2P04899 355 aa27.3■■□□□ 1.96
HPS3-207ENST00000494327 ATG9AQ7Z3C6 839 aa27.3■■□□□ 1.96
HPS3-207ENST00000494327 KRT26Q7Z3Y9 468 aa27.3■■□□□ 1.96
HPS3-207ENST00000494327 ZNF408Q9H9D4 720 aa27.3■■□□□ 1.96
HPS3-207ENST00000494327 GGA3Q9NZ52 723 aa27.3■■□□□ 1.96
HPS3-207ENST00000494327 SRGAP3O43295 1099 aa27.29■■□□□ 1.96
HPS3-207ENST00000494327 DLK2Q6UY11 383 aa27.29■■□□□ 1.96
HPS3-207ENST00000494327 ITPRIPQ8IWB1 547 aa27.29■■□□□ 1.96
HPS3-207ENST00000494327 SASH1O94885 1247 aa27.28■■□□□ 1.96
HPS3-207ENST00000494327 CELF2O95319 508 aaKnown RBP27.28■■□□□ 1.96
HPS3-207ENST00000494327 RLBP1P12271 317 aa27.28■■□□□ 1.96
HPS3-207ENST00000494327 PUM3Q15397 648 aaKnown RBP27.28■■□□□ 1.96
HPS3-207ENST00000494327 CAVIN4Q5BKX8 364 aa27.28■■□□□ 1.96
HPS3-207ENST00000494327 CST9Q5W186 159 aa27.28■■□□□ 1.96
HPS3-207ENST00000494327 TDRD7Q8NHU6 1098 aaKnown RBP27.28■■□□□ 1.96
HPS3-207ENST00000494327 HDAC9Q9UKV0 1011 aa27.28■■□□□ 1.96
HPS3-207ENST00000494327 F8W031 263 aaPredicted RBP27.27■■□□□ 1.96
HPS3-207ENST00000494327 IFIT1P09914 478 aaKnown RBP27.27■■□□□ 1.96
HPS3-207ENST00000494327 ANGEL2Q5VTE6 544 aaKnown RBP27.27■■□□□ 1.96
HPS3-207ENST00000494327 CERS5Q8N5B7 392 aa27.27■■□□□ 1.96
HPS3-207ENST00000494327 CEP126Q9P2H0 1117 aa27.27■■□□□ 1.96
HPS3-207ENST00000494327 FBXO3Q9UK99 471 aa27.27■■□□□ 1.96
HPS3-207ENST00000494327 IQSEC3Q9UPP2 1182 aaPredicted RBP27.27■■□□□ 1.96
HPS3-207ENST00000494327 ADM5C9JUS6 153 aa27.26■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms