RNA–Protein interactions for RNA: ENST00000494268.1

MSL3-217, Transcript of MSL complex subunit 3, humanhuman

TSL 2

Gene MSL3, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-217ENST00000494268 BAG6P46379 1132 aa10.21□□□□□ -0.77
MSL3-217ENST00000494268 FMR1Q06787 632 aaKnown RBP eCLIP10.21□□□□□ -0.77
MSL3-217ENST00000494268 TMCO4Q5TGY1 634 aa10.21□□□□□ -0.77
MSL3-217ENST00000494268 DMRTC2Q8IXT2 367 aaPredicted RBP10.21□□□□□ -0.77
MSL3-217ENST00000494268 EPS8L3Q8TE67 593 aaKnown RBP10.21□□□□□ -0.77
MSL3-217ENST00000494268 LACRTQ9GZZ8 138 aa10.21□□□□□ -0.77
MSL3-217ENST00000494268 NPHS2Q9NP85 383 aa10.21□□□□□ -0.77
MSL3-217ENST00000494268 A0A1W2PP55 124 aa10.2□□□□□ -0.78
MSL3-217ENST00000494268 ENOX2Q16206 610 aaKnown RBP10.2□□□□□ -0.78
MSL3-217ENST00000494268 MSL1Q68DK7 614 aa10.2□□□□□ -0.78
MSL3-217ENST00000494268 IL22RA1Q8N6P7 574 aa10.2□□□□□ -0.78
MSL3-217ENST00000494268 PDE2AO00408 941 aaPredicted RBP10.19□□□□□ -0.78
MSL3-217ENST00000494268 COL8A1P27658 744 aa10.19□□□□□ -0.78
MSL3-217ENST00000494268 TRAPPC3LQ5T215 181 aa10.19□□□□□ -0.78
MSL3-217ENST00000494268 PI16Q6UXB8 463 aa10.19□□□□□ -0.78
MSL3-217ENST00000494268 ILDR2Q71H61 639 aa10.19□□□□□ -0.78
MSL3-217ENST00000494268 NXPE3Q969Y0 559 aa10.19□□□□□ -0.78
MSL3-217ENST00000494268 SH2B1Q9NRF2 756 aaPredicted RBP10.19□□□□□ -0.78
MSL3-217ENST00000494268 WFDC8Q8IUA0 241 aa10.18□□□□□ -0.78
MSL3-217ENST00000494268 FAM229AH3BQW9 127 aa10.17□□□□□ -0.78
MSL3-217ENST00000494268 GSK3AP49840 483 aa10.17□□□□□ -0.78
MSL3-217ENST00000494268 NPAS4Q8IUM7 802 aa10.17□□□□□ -0.78
MSL3-217ENST00000494268 TMEM102Q8N9M5 508 aaPredicted RBP10.17□□□□□ -0.78
MSL3-217ENST00000494268 METTL12A8MUP2 240 aa10.16□□□□□ -0.78
MSL3-217ENST00000494268 PIK3R2O00459 728 aa10.16□□□□□ -0.78
MSL3-217ENST00000494268 CDC25BP30305 580 aa10.16□□□□□ -0.78
MSL3-217ENST00000494268 KIAA0319Q5VV43 1072 aa10.16□□□□□ -0.78
MSL3-217ENST00000494268 TCF12Q99081 682 aa10.16□□□□□ -0.78
MSL3-217ENST00000494268 GADD45BO75293 160 aaPredicted RBP10.15□□□□□ -0.78
MSL3-217ENST00000494268 ASAP3Q8TDY4 903 aa10.15□□□□□ -0.78
MSL3-217ENST00000494268 ADAM19Q9H013 955 aa10.15□□□□□ -0.78
MSL3-217ENST00000494268 LIN7BQ9HAP6 207 aa10.15□□□□□ -0.78
MSL3-217ENST00000494268 PTPRAP18433 802 aa10.14□□□□□ -0.79
MSL3-217ENST00000494268 CDC27P30260 824 aa10.14□□□□□ -0.79
MSL3-217ENST00000494268 MFAP1P55081 439 aaKnown RBP10.14□□□□□ -0.79
MSL3-217ENST00000494268 KCNMA1Q12791 1236 aa10.14□□□□□ -0.79
MSL3-217ENST00000494268 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.14□□□□□ -0.79
MSL3-217ENST00000494268 TXNDC11Q6PKC3 985 aa10.14□□□□□ -0.79
MSL3-217ENST00000494268 EHD4Q9H223 541 aa10.14□□□□□ -0.79
MSL3-217ENST00000494268 A0A0A0MRY4 1105 aa10.13□□□□□ -0.79
MSL3-217ENST00000494268 LINC01387J3KSC0 135 aa10.13□□□□□ -0.79
MSL3-217ENST00000494268 LDHBP07195 334 aaKnown RBP10.13□□□□□ -0.79
MSL3-217ENST00000494268 EPHA1P21709 976 aa10.13□□□□□ -0.79
MSL3-217ENST00000494268 GRIA4P48058 902 aa10.13□□□□□ -0.79
MSL3-217ENST00000494268 RASSF7Q02833 373 aa10.13□□□□□ -0.79
MSL3-217ENST00000494268 TRIM28Q13263 835 aaKnown RBP10.13□□□□□ -0.79
MSL3-217ENST00000494268 SPRED3Q2MJR0 410 aa10.13□□□□□ -0.79
MSL3-217ENST00000494268 CCNJLQ8IV13 435 aa10.13□□□□□ -0.79
MSL3-217ENST00000494268 BHLHE41Q9C0J9 482 aaPredicted RBP10.13□□□□□ -0.79
MSL3-217ENST00000494268 NLRP2Q9NX02 1062 aa10.13□□□□□ -0.79
MSL3-217ENST00000494268 NOP53Q9NZM5 478 aaKnown RBP10.13□□□□□ -0.79
MSL3-217ENST00000494268 PPME1Q9Y570 386 aa10.13□□□□□ -0.79
MSL3-217ENST00000494268 RNF225M0QZC1 329 aaPredicted RBP10.12□□□□□ -0.79
MSL3-217ENST00000494268 DEAF1O75398 565 aaPredicted RBP10.12□□□□□ -0.79
MSL3-217ENST00000494268 TAGLNQ01995 201 aaKnown RBP10.12□□□□□ -0.79
MSL3-217ENST00000494268 GRM2Q14416 872 aa10.12□□□□□ -0.79
MSL3-217ENST00000494268 EAPPQ56P03 285 aaPredicted RBP10.12□□□□□ -0.79
MSL3-217ENST00000494268 RNF19AQ9NV58 838 aa10.12□□□□□ -0.79
MSL3-217ENST00000494268 CACTIN-AS1Q8N1I8 211 aa10.11□□□□□ -0.79
MSL3-217ENST00000494268 BSNDQ8WZ55 320 aa10.11□□□□□ -0.79
MSL3-217ENST00000494268 MUC3BQ9H195 1237 aa10.11□□□□□ -0.79
MSL3-217ENST00000494268 SOX13Q9UN79 622 aa10.11□□□□□ -0.79
MSL3-217ENST00000494268 SPDYE3A6NKU9 549 aa10.1□□□□□ -0.79
MSL3-217ENST00000494268 COL19A1Q14993 1142 aa10.1□□□□□ -0.79
MSL3-217ENST00000494268 SETDB1Q15047 1291 aa10.1□□□□□ -0.79
MSL3-217ENST00000494268 GRIK4Q16099 956 aa10.1□□□□□ -0.79
MSL3-217ENST00000494268 ALG1LQ6GMV1 187 aa10.1□□□□□ -0.79
MSL3-217ENST00000494268 VN1R5Q7Z5H4 357 aa10.1□□□□□ -0.79
MSL3-217ENST00000494268 FMR1NBQ8N0W7 255 aaPredicted RBP10.1□□□□□ -0.79
MSL3-217ENST00000494268 GLIS3Q8NEA6 775 aa10.1□□□□□ -0.79
MSL3-217ENST00000494268 DCAF5Q96JK2 942 aa10.1□□□□□ -0.79
MSL3-217ENST00000494268 BCO2Q9BYV7 579 aa10.1□□□□□ -0.79
MSL3-217ENST00000494268 A0A096LPE4 126 aa10.09□□□□□ -0.79
MSL3-217ENST00000494268 A0A1W2PPZ6 126 aa10.09□□□□□ -0.79
MSL3-217ENST00000494268 ATP2B2Q01814 1243 aa10.09□□□□□ -0.79
MSL3-217ENST00000494268 HGSNATQ68CP4 663 aa10.09□□□□□ -0.79
MSL3-217ENST00000494268 NXPE4Q6UWF7 544 aa10.09□□□□□ -0.79
MSL3-217ENST00000494268 FBXO33Q7Z6M2 555 aa10.09□□□□□ -0.79
MSL3-217ENST00000494268 KRBA1A5PL33 1030 aa10.08□□□□□ -0.8
MSL3-217ENST00000494268 ERCC3P19447 782 aa10.08□□□□□ -0.8
MSL3-217ENST00000494268 RAC1P63000 192 aa10.08□□□□□ -0.8
MSL3-217ENST00000494268 PRRT3Q5FWE3 981 aa10.08□□□□□ -0.8
MSL3-217ENST00000494268 FBXO11Q86XK2 927 aa10.08□□□□□ -0.8
MSL3-217ENST00000494268 FBF1Q8TES7 1133 aa10.08□□□□□ -0.8
MSL3-217ENST00000494268 OSBPL7Q9BZF2 842 aa10.08□□□□□ -0.8
MSL3-217ENST00000494268 ABCB6Q9NP58 842 aa10.08□□□□□ -0.8
MSL3-217ENST00000494268 FAM177BA6PVY3 158 aa10.07□□□□□ -0.8
MSL3-217ENST00000494268 GDF11O95390 407 aa10.07□□□□□ -0.8
MSL3-217ENST00000494268 DTWD1Q8N5C7 304 aa10.07□□□□□ -0.8
MSL3-217ENST00000494268 GALNT11Q8NCW6 608 aa10.07□□□□□ -0.8
MSL3-217ENST00000494268 DUSP9Q99956 384 aaKnown RBP10.07□□□□□ -0.8
MSL3-217ENST00000494268 CARD10Q9BWT7 1032 aa10.07□□□□□ -0.8
MSL3-217ENST00000494268 TMEM238LA0A1B0GVL6 79 aa10.06□□□□□ -0.8
MSL3-217ENST00000494268 SOX1O00570 391 aaPredicted RBP10.06□□□□□ -0.8
MSL3-217ENST00000494268 PRPF40AO75400 957 aaKnown RBP10.06□□□□□ -0.8
MSL3-217ENST00000494268 SPATA31C1P0DKV0 1188 aa10.06□□□□□ -0.8
MSL3-217ENST00000494268 CABP4P57796 275 aa10.06□□□□□ -0.8
MSL3-217ENST00000494268 SHISA2Q6UWI4 295 aa10.06□□□□□ -0.8
MSL3-217ENST00000494268 TMEM151AQ8N4L1 468 aa10.06□□□□□ -0.8
MSL3-217ENST00000494268 H3BRJ5 948 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms