RNA–Protein interactions for RNA: ENST00000494054.1

UFD1-210, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-210ENST00000494054 SAPCD2Q86UD0 394 aa12.38□□□□□ -0.43
UFD1-210ENST00000494054 SSH1Q8WYL5 1049 aa12.38□□□□□ -0.43
UFD1-210ENST00000494054 KAZALD1Q96I82 304 aa12.38□□□□□ -0.43
UFD1-210ENST00000494054 ZNF594Q96JF6 807 aaPredicted RBP12.38□□□□□ -0.43
UFD1-210ENST00000494054 CAPNS2Q96L46 248 aa12.38□□□□□ -0.43
UFD1-210ENST00000494054 ZNF408Q9H9D4 720 aa12.38□□□□□ -0.43
UFD1-210ENST00000494054 WBP1LQ9NX94 342 aa12.38□□□□□ -0.43
UFD1-210ENST00000494054 CHMP3Q9Y3E7 222 aa12.38□□□□□ -0.43
UFD1-210ENST00000494054 ZNF609O15014 1411 aa12.37□□□□□ -0.43
UFD1-210ENST00000494054 ADM5C9JUS6 153 aa12.37□□□□□ -0.43
UFD1-210ENST00000494054 TAF5LO75529 589 aa12.37□□□□□ -0.43
UFD1-210ENST00000494054 GRM1Q13255 1194 aa12.37□□□□□ -0.43
UFD1-210ENST00000494054 IFIT5Q13325 482 aaKnown RBP12.37□□□□□ -0.43
UFD1-210ENST00000494054 DACT2Q5SW24 774 aa12.37□□□□□ -0.43
UFD1-210ENST00000494054 PAXIP1Q6ZW49 1069 aaPredicted RBP12.37□□□□□ -0.43
UFD1-210ENST00000494054 KRT26Q7Z3Y9 468 aa12.37□□□□□ -0.43
UFD1-210ENST00000494054 HELBQ8NG08 1087 aaPredicted RBP12.37□□□□□ -0.43
UFD1-210ENST00000494054 COA1Q9GZY4 146 aa12.37□□□□□ -0.43
UFD1-210ENST00000494054 C9orf78Q9NZ63 289 aaPredicted RBP12.37□□□□□ -0.43
UFD1-210ENST00000494054 CCER2I3L3R5 266 aa12.36□□□□□ -0.43
UFD1-210ENST00000494054 NBPF7P0C2Y1 421 aaPredicted RBP12.36□□□□□ -0.43
UFD1-210ENST00000494054 USP17L8P0C7I0 530 aa12.36□□□□□ -0.43
UFD1-210ENST00000494054 SCARF1Q14162 830 aa12.36□□□□□ -0.43
UFD1-210ENST00000494054 TRMT2AQ8IZ69 625 aaKnown RBP12.36□□□□□ -0.43
UFD1-210ENST00000494054 DCPSQ96C86 337 aaKnown RBP12.36□□□□□ -0.43
UFD1-210ENST00000494054 SUCLG2Q96I99 432 aa12.36□□□□□ -0.43
UFD1-210ENST00000494054 GGA3Q9NZ52 723 aa12.36□□□□□ -0.43
UFD1-210ENST00000494054 PSME4Q14997 1843 aa12.36□□□□□ -0.43
UFD1-210ENST00000494054 POLR2AP24928 1970 aaKnown RBP12.36□□□□□ -0.43
UFD1-210ENST00000494054 IRS2Q9Y4H2 1338 aa12.36□□□□□ -0.43
UFD1-210ENST00000494054 AOC2O75106 756 aa12.35□□□□□ -0.43
UFD1-210ENST00000494054 STRIP1Q5VSL9 837 aa12.35□□□□□ -0.43
UFD1-210ENST00000494054 FBXW7Q969H0 707 aa12.35□□□□□ -0.43
UFD1-210ENST00000494054 MYOZ2Q9NPC6 264 aa12.35□□□□□ -0.43
UFD1-210ENST00000494054 UTYO14607 1347 aa12.35□□□□□ -0.43
UFD1-210ENST00000494054 ZNF646O15015 1829 aaPredicted RBP12.34□□□□□ -0.43
UFD1-210ENST00000494054 ECE1P42892 770 aa12.34□□□□□ -0.43
UFD1-210ENST00000494054 KCNJ4P48050 445 aa12.34□□□□□ -0.43
UFD1-210ENST00000494054 CCDC57Q2TAC2 916 aa12.34□□□□□ -0.43
UFD1-210ENST00000494054 ANGEL2Q5VTE6 544 aaKnown RBP12.34□□□□□ -0.43
UFD1-210ENST00000494054 TNS4Q8IZW8 715 aa12.34□□□□□ -0.43
UFD1-210ENST00000494054 AIDAQ96BJ3 306 aa12.34□□□□□ -0.43
UFD1-210ENST00000494054 PLIN1O60240 522 aa12.33□□□□□ -0.44
UFD1-210ENST00000494054 CAPN15O75808 1086 aa12.33□□□□□ -0.44
UFD1-210ENST00000494054 CTCFP49711 727 aaPredicted RBP12.33□□□□□ -0.44
UFD1-210ENST00000494054 HUNKP57058 714 aa12.33□□□□□ -0.44
UFD1-210ENST00000494054 GTF2IP78347 998 aa12.33□□□□□ -0.44
UFD1-210ENST00000494054 MAP2K1Q02750 393 aaPredicted RBP12.33□□□□□ -0.44
UFD1-210ENST00000494054 NBPF9Q3BBW0 867 aa12.33□□□□□ -0.44
UFD1-210ENST00000494054 TTLL5Q6EMB2 1281 aa12.33□□□□□ -0.44
UFD1-210ENST00000494054 LDHAL6AQ6ZMR3 332 aa12.33□□□□□ -0.44
UFD1-210ENST00000494054 C15orf52Q6ZUT6 534 aaKnown RBP12.33□□□□□ -0.44
UFD1-210ENST00000494054 SULF1Q8IWU6 871 aa12.33□□□□□ -0.44
UFD1-210ENST00000494054 HHIPL1Q96JK4 782 aa12.33□□□□□ -0.44
UFD1-210ENST00000494054 PUS3Q9BZE2 481 aaKnown RBP12.33□□□□□ -0.44
UFD1-210ENST00000494054 CD209Q9NNX6 404 aa12.33□□□□□ -0.44
UFD1-210ENST00000494054 CNNM1Q9NRU3 951 aa12.33□□□□□ -0.44
UFD1-210ENST00000494054 SCAF8Q9UPN6 1271 aaKnown RBP12.33□□□□□ -0.44
UFD1-210ENST00000494054 PTPRCP08575 1304 aa12.33□□□□□ -0.44
UFD1-210ENST00000494054 THSD7BQ9C0I4 1608 aa12.33□□□□□ -0.44
UFD1-210ENST00000494054 HSPA8P11142 646 aaKnown RBP12.32□□□□□ -0.44
UFD1-210ENST00000494054 LBX1P52954 281 aa12.32□□□□□ -0.44
UFD1-210ENST00000494054 ALDH1L2Q3SY69 923 aa12.32□□□□□ -0.44
UFD1-210ENST00000494054 TAF7LQ5H9L4 462 aa12.32□□□□□ -0.44
UFD1-210ENST00000494054 ANKRD44Q8N8A2 993 aa12.32□□□□□ -0.44
UFD1-210ENST00000494054 CDCA5Q96FF9 252 aa12.32□□□□□ -0.44
UFD1-210ENST00000494054 ZIC5Q96T25 663 aa12.32□□□□□ -0.44
UFD1-210ENST00000494054 BICC1Q9H694 974 aaKnown RBP12.32□□□□□ -0.44
UFD1-210ENST00000494054 GBA2Q9HCG7 927 aaPredicted RBP12.32□□□□□ -0.44
UFD1-210ENST00000494054 MYO3BQ8WXR4 1341 aa12.32□□□□□ -0.44
UFD1-210ENST00000494054 A0A1B0GUL6 1792 aa12.31□□□□□ -0.44
UFD1-210ENST00000494054 WNT10BO00744 389 aa12.31□□□□□ -0.44
UFD1-210ENST00000494054 MAP2K2P36507 400 aa12.31□□□□□ -0.44
UFD1-210ENST00000494054 RABL6Q3YEC7 729 aaPredicted RBP12.31□□□□□ -0.44
UFD1-210ENST00000494054 KIAA0825Q8IV33 1275 aa12.31□□□□□ -0.44
UFD1-210ENST00000494054 CERS5Q8N5B7 392 aa12.31□□□□□ -0.44
UFD1-210ENST00000494054 USP44Q9H0E7 712 aa12.31□□□□□ -0.44
UFD1-210ENST00000494054 PRDM10Q9NQV6 1147 aa12.31□□□□□ -0.44
UFD1-210ENST00000494054 SMC4Q9NTJ3 1288 aa12.31□□□□□ -0.44
UFD1-210ENST00000494054 SASH1O94885 1247 aa12.3□□□□□ -0.44
UFD1-210ENST00000494054 IL1R1P14778 569 aa12.3□□□□□ -0.44
UFD1-210ENST00000494054 PRAMEF18Q5VWM3 479 aa12.3□□□□□ -0.44
UFD1-210ENST00000494054 OGFOD1Q8N543 542 aa12.3□□□□□ -0.44
UFD1-210ENST00000494054 C2orf69Q8N8R5 385 aa12.3□□□□□ -0.44
UFD1-210ENST00000494054 RIPOR2Q9Y4F9 1068 aa12.3□□□□□ -0.44
UFD1-210ENST00000494054 PITPNM2Q9BZ72 1349 aa12.3□□□□□ -0.44
UFD1-210ENST00000494054 FAM155AB1AL88 458 aaPredicted RBP12.29□□□□□ -0.44
UFD1-210ENST00000494054 LRRC24Q50LG9 513 aa12.29□□□□□ -0.44
UFD1-210ENST00000494054 RGMBQ6NW40 437 aa12.29□□□□□ -0.44
UFD1-210ENST00000494054 ZNF804AQ7Z570 1209 aa12.29□□□□□ -0.44
UFD1-210ENST00000494054 KLHDC4Q8TBB5 520 aa12.29□□□□□ -0.44
UFD1-210ENST00000494054 ZBED3Q96IU2 234 aaPredicted RBP12.29□□□□□ -0.44
UFD1-210ENST00000494054 TSKSQ9UJT2 592 aa12.29□□□□□ -0.44
UFD1-210ENST00000494054 NOB1Q9ULX3 412 aaKnown RBP12.29□□□□□ -0.44
UFD1-210ENST00000494054 JAG2Q9Y219 1238 aa12.29□□□□□ -0.44
UFD1-210ENST00000494054 GYG1P46976 350 aa12.28□□□□□ -0.44
UFD1-210ENST00000494054 UBE4AQ14139 1066 aa12.28□□□□□ -0.44
UFD1-210ENST00000494054 MOB2Q70IA6 237 aa12.28□□□□□ -0.44
UFD1-210ENST00000494054 FAM84BQ96KN1 310 aaPredicted RBP12.28□□□□□ -0.44
UFD1-210ENST00000494054 PCDHAC2Q9Y5I4 1007 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms